| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG018928 |
Definition |
Pseudomonas phage inbricus, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Jwalphavirus; unclassified Jwalphavirus. |
DB of origin |
NUCCORE |
Length |
70211 |
Host Name |
Pseudomonas syringae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
76 |
%GC |
55.85 |
Number of singletons |
20 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATW58167.1 | MG018928_p71 | hypothetical protein | singleton | unknown function | unknown function | 1 | 67622 | 67771 |
| ATW58120.1 | MG018928_p24 | hypothetical protein | phrog_1357 | major head protein | head and packaging | -1 | 34888 | 36111 |
| ATW58149.1 | MG018928_p53 | DNA-dependent RNA polymerase | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 58277 | 59473 |
| ATW58144.1 | MG018928_p48 | hypothetical protein | phrog_2072 | unknown function | unknown function | 1 | 56105 | 56533 |
| ATW58139.1 | MG018928_p43 | hypothetical protein | phrog_4099 | unknown function | unknown function | 1 | 54545 | 54955 |
| ATW58109.1 | MG018928_p13 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 14496 | 15257 |
| ATW58159.1 | MG018928_p63 | hypothetical protein | phrog_7900 | unknown function | unknown function | 1 | 63274 | 63471 |
| ATW58165.1 | MG018928_p69 | metallopeptidase domain protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 65906 | 67063 |
| ATW58172.1 | MG018928_p76 | hypothetical protein | singleton | unknown function | unknown function | 1 | 69363 | 69575 |
| ATW58170.1 | MG018928_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 68900 | 69187 |
| ATW58102.1 | MG018928_p6 | hypothetical protein | phrog_4881 | unknown function | unknown function | 1 | 6828 | 7340 |
| ATW58118.1 | MG018928_p22 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | -1 | 33168 | 34067 |
| ATW58130.1 | MG018928_p34 | hypothetical protein | singleton | unknown function | unknown function | -1 | 47507 | 48709 |
| ATW58127.1 | MG018928_p31 | hypothetical protein | phrog_5211 | unknown function | unknown function | -1 | 41481 | 41813 |
| ATW58137.1 | MG018928_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53671 | 53847 |
| ATW58111.1 | MG018928_p15 | crossover junction endodeoxyribonuclease | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 16062 | 16622 |
| ATW58141.1 | MG018928_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 55464 | 55739 |
| ATW58152.1 | MG018928_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 60488 | 61285 |
| ATW58099.1 | MG018928_p3 | rIIB-like protein | phrog_2886 | RIIB lysis inhibitor | lysis | 1 | 3008 | 4603 |
| ATW58160.1 | MG018928_p64 | hypothetical protein | singleton | unknown function | unknown function | 1 | 63719 | 63928 |
| ATW58138.1 | MG018928_p42 | hypothetical protein | phrog_5020 | unknown function | unknown function | 1 | 54038 | 54355 |
| ATW58145.1 | MG018928_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 56568 | 56777 |
| ATW58101.1 | MG018928_p5 | DNA helicase | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 5512 | 6819 |
| ATW58108.1 | MG018928_p12 | hypothetical protein | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 12265 | 14439 |
| ATW58131.1 | MG018928_p35 | hypothetical protein | phrog_2125 | virion structural protein | head and packaging | -1 | 48712 | 49419 |
| ATW58135.1 | MG018928_p39 | hypothetical protein | phrog_7213 | unknown function | unknown function | 1 | 52574 | 52894 |
| ATW58150.1 | MG018928_p54 | hypothetical protein | phrog_1035 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 59529 | 59810 |
| ATW58121.1 | MG018928_p25 | hypothetical protein | phrog_2120 | tail length tape measure protein | tail | -1 | 36124 | 37431 |
| ATW58106.1 | MG018928_p10 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 10767 | 11762 |
| ATW58115.1 | MG018928_p19 | structural protein | phrog_6126 | virion structural protein | head and packaging | -1 | 27877 | 29925 |
| ATW58110.1 | MG018928_p14 | hypothetical protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 15297 | 16055 |
| ATW58154.1 | MG018928_p58 | homing endonuclease | phrog_1872 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 61671 | 62012 |
| ATW58113.1 | MG018928_p17 | hypothetical protein | phrog_19025 | unknown function | unknown function | 1 | 17137 | 17325 |
| ATW58155.1 | MG018928_p59 | hypothetical protein | phrog_17232 | unknown function | unknown function | 1 | 62009 | 62356 |
| ATW58123.1 | MG018928_p27 | portal protein | phrog_1216 | portal protein | head and packaging | -1 | 37820 | 40108 |
| ATW58142.1 | MG018928_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 55733 | 55957 |
| ATW58124.1 | MG018928_p28 | hypothetical protein | phrog_6197 | Rz-like spanin | lysis | -1 | 40118 | 40630 |
| ATW58125.1 | MG018928_p29 | N-acetylmuramidase | phrog_315 | endolysin | lysis | -1 | 40608 | 41246 |
| ATW58107.1 | MG018928_p11 | HNH homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 11759 | 12268 |
| ATW58161.1 | MG018928_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 63918 | 64256 |
| ATW58126.1 | MG018928_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 41362 | 41496 |
| ATW58112.1 | MG018928_p16 | hypothetical protein | phrog_18842 | unknown function | unknown function | 1 | 16635 | 17126 |
| ATW58122.1 | MG018928_p26 | hypothetical protein | phrog_2346 | unknown function | unknown function | -1 | 37457 | 37804 |
| ATW58140.1 | MG018928_p44 | DNA processing chain A | phrog_289 | GTP-binding domain | other | 1 | 55093 | 55449 |
| ATW58166.1 | MG018928_p70 | deoxycytidine triphosphate deaminase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | 1 | 67071 | 67580 |
| ATW58163.1 | MG018928_p67 | AAA domain protein | phrog_1297 | ATPase | other | 1 | 64591 | 65631 |
| ATW58116.1 | MG018928_p20 | hypothetical protein | phrog_16623 | unknown function | unknown function | -1 | 29938 | 30462 |
| ATW58158.1 | MG018928_p62 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 62968 | 63270 |
| ATW58119.1 | MG018928_p23 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 34146 | 34817 |
| ATW58100.1 | MG018928_p4 | NTP pyrophosphohydrolase | phrog_671 | nucleotide pyrophosphohydrolase | other | 1 | 4993 | 5451 |
| ATW58097.1 | MG018928_p1 | thymidylate synthase | singleton | unknown function | unknown function | 1 | 26 | 379 |
| ATW58153.1 | MG018928_p57 | hypothetical protein | phrog_10749 | unknown function | unknown function | 1 | 61282 | 61674 |
| ATW58168.1 | MG018928_p72 | hypothetical protein | singleton | unknown function | unknown function | 1 | 67912 | 68034 |
| ATW58164.1 | MG018928_p68 | hypothetical protein | singleton | unknown function | unknown function | 1 | 65624 | 65902 |
| ATW58147.1 | MG018928_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57600 | 57959 |
| ATW58133.1 | MG018928_p37 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 51018 | 51695 |
| ATW58148.1 | MG018928_p52 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57966 | 58244 |
| ATW58114.1 | MG018928_p18 | virion RNA polymerase | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 17362 | 27777 |
| ATW58171.1 | MG018928_p75 | hypothetical protein | singleton | unknown function | unknown function | 1 | 69190 | 69363 |
| ATW58162.1 | MG018928_p66 | hypothetical protein | phrog_21163 | unknown function | unknown function | 1 | 64365 | 64580 |
| ATW58134.1 | MG018928_p38 | hypothetical protein | phrog_3934 | unknown function | unknown function | -1 | 51738 | 52436 |
| ATW58117.1 | MG018928_p21 | hypothetical protein | phrog_2220 | unknown function | unknown function | -1 | 30474 | 33164 |
| ATW58169.1 | MG018928_p73 | thioredoxin-1 | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 68600 | 68893 |
| ATW58136.1 | MG018928_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53145 | 53612 |
| ATW58105.1 | MG018928_p9 | hypothetical protein | phrog_4521 | unknown function | unknown function | 1 | 10429 | 10713 |
| ATW58104.1 | MG018928_p8 | hypothetical protein | phrog_5974 | unknown function | unknown function | 1 | 10006 | 10425 |
| ATW58098.1 | MG018928_p2 | rIIA lysis inhibitor | phrog_2979 | RIIA lysis inhibitor | lysis | 1 | 438 | 2996 |
| ATW58157.1 | MG018928_p61 | hypothetical protein | phrog_24427 | unknown function | unknown function | 1 | 62696 | 62968 |
| ATW58132.1 | MG018928_p36 | terminase-like family protein | phrog_38 | terminase large subunit | head and packaging | -1 | 49427 | 51025 |
| ATW58146.1 | MG018928_p50 | DNA-dependent RNA polymerase | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 56779 | 57603 |
| ATW58128.1 | MG018928_p32 | hypothetical protein | phrog_16150 | tail assembly protein | tail | -1 | 41940 | 43205 |
| ATW58156.1 | MG018928_p60 | hypothetical protein | phrog_17762 | unknown function | unknown function | 1 | 62356 | 62676 |
| ATW58103.1 | MG018928_p7 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 7349 | 10009 |
| ATW58143.1 | MG018928_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 55926 | 56102 |
| ATW58151.1 | MG018928_p55 | Ig-like domain protein | phrog_215 | structural protein with Ig domain | head and packaging | 1 | 59912 | 60403 |
| ATW58129.1 | MG018928_p33 | hypothetical protein | phrog_15324 | tail sheath and receptor binding protein | tail | -1 | 43245 | 47432 |