Genomic map of Pseudomonas phage inbricus (MG018928)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG018928
Definition
Pseudomonas phage inbricus, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Jwalphavirus; unclassified Jwalphavirus.
DB of origin
NUCCORE
Length
70211
Host Name
Pseudomonas syringae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
76
%GC
55.85
Number of singletons
20
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATW58167.1 MG018928_p71 hypothetical protein singleton unknown function unknown function 1 67622 67771
ATW58120.1 MG018928_p24 hypothetical protein phrog_1357 major head protein head and packaging -1 34888 36111
ATW58149.1 MG018928_p53 DNA-dependent RNA polymerase phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism 1 58277 59473
ATW58144.1 MG018928_p48 hypothetical protein phrog_2072 unknown function unknown function 1 56105 56533
ATW58139.1 MG018928_p43 hypothetical protein phrog_4099 unknown function unknown function 1 54545 54955
ATW58109.1 MG018928_p13 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 14496 15257
ATW58159.1 MG018928_p63 hypothetical protein phrog_7900 unknown function unknown function 1 63274 63471
ATW58165.1 MG018928_p69 metallopeptidase domain protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 65906 67063
ATW58172.1 MG018928_p76 hypothetical protein singleton unknown function unknown function 1 69363 69575
ATW58170.1 MG018928_p74 hypothetical protein singleton unknown function unknown function 1 68900 69187
ATW58102.1 MG018928_p6 hypothetical protein phrog_4881 unknown function unknown function 1 6828 7340
ATW58118.1 MG018928_p22 hypothetical protein phrog_2050 virion structural protein head and packaging -1 33168 34067
ATW58130.1 MG018928_p34 hypothetical protein singleton unknown function unknown function -1 47507 48709
ATW58127.1 MG018928_p31 hypothetical protein phrog_5211 unknown function unknown function -1 41481 41813
ATW58137.1 MG018928_p41 hypothetical protein singleton unknown function unknown function 1 53671 53847
ATW58111.1 MG018928_p15 crossover junction endodeoxyribonuclease phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 16062 16622
ATW58141.1 MG018928_p45 hypothetical protein singleton unknown function unknown function 1 55464 55739
ATW58152.1 MG018928_p56 hypothetical protein singleton unknown function unknown function 1 60488 61285
ATW58099.1 MG018928_p3 rIIB-like protein phrog_2886 RIIB lysis inhibitor lysis 1 3008 4603
ATW58160.1 MG018928_p64 hypothetical protein singleton unknown function unknown function 1 63719 63928
ATW58138.1 MG018928_p42 hypothetical protein phrog_5020 unknown function unknown function 1 54038 54355
ATW58145.1 MG018928_p49 hypothetical protein singleton unknown function unknown function 1 56568 56777
ATW58101.1 MG018928_p5 DNA helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 5512 6819
ATW58108.1 MG018928_p12 hypothetical protein phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 1 12265 14439
ATW58131.1 MG018928_p35 hypothetical protein phrog_2125 virion structural protein head and packaging -1 48712 49419
ATW58135.1 MG018928_p39 hypothetical protein phrog_7213 unknown function unknown function 1 52574 52894
ATW58150.1 MG018928_p54 hypothetical protein phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 59529 59810
ATW58121.1 MG018928_p25 hypothetical protein phrog_2120 tail length tape measure protein tail -1 36124 37431
ATW58106.1 MG018928_p10 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism 1 10767 11762
ATW58115.1 MG018928_p19 structural protein phrog_6126 virion structural protein head and packaging -1 27877 29925
ATW58110.1 MG018928_p14 hypothetical protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 15297 16055
ATW58154.1 MG018928_p58 homing endonuclease phrog_1872 endonuclease DNA, RNA and nucleotide metabolism 1 61671 62012
ATW58113.1 MG018928_p17 hypothetical protein phrog_19025 unknown function unknown function 1 17137 17325
ATW58155.1 MG018928_p59 hypothetical protein phrog_17232 unknown function unknown function 1 62009 62356
ATW58123.1 MG018928_p27 portal protein phrog_1216 portal protein head and packaging -1 37820 40108
ATW58142.1 MG018928_p46 hypothetical protein singleton unknown function unknown function 1 55733 55957
ATW58124.1 MG018928_p28 hypothetical protein phrog_6197 Rz-like spanin lysis -1 40118 40630
ATW58125.1 MG018928_p29 N-acetylmuramidase phrog_315 endolysin lysis -1 40608 41246
ATW58107.1 MG018928_p11 HNH homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 11759 12268
ATW58161.1 MG018928_p65 hypothetical protein singleton unknown function unknown function 1 63918 64256
ATW58126.1 MG018928_p30 hypothetical protein singleton unknown function unknown function -1 41362 41496
ATW58112.1 MG018928_p16 hypothetical protein phrog_18842 unknown function unknown function 1 16635 17126
ATW58122.1 MG018928_p26 hypothetical protein phrog_2346 unknown function unknown function -1 37457 37804
ATW58140.1 MG018928_p44 DNA processing chain A phrog_289 GTP-binding domain other 1 55093 55449
ATW58166.1 MG018928_p70 deoxycytidine triphosphate deaminase phrog_1663 dCTP deaminase DNA, RNA and nucleotide metabolism 1 67071 67580
ATW58163.1 MG018928_p67 AAA domain protein phrog_1297 ATPase other 1 64591 65631
ATW58116.1 MG018928_p20 hypothetical protein phrog_16623 unknown function unknown function -1 29938 30462
ATW58158.1 MG018928_p62 hypothetical protein phrog_464 unknown function unknown function 1 62968 63270
ATW58119.1 MG018928_p23 hypothetical protein phrog_2130 unknown function unknown function -1 34146 34817
ATW58100.1 MG018928_p4 NTP pyrophosphohydrolase phrog_671 nucleotide pyrophosphohydrolase other 1 4993 5451
ATW58097.1 MG018928_p1 thymidylate synthase singleton unknown function unknown function 1 26 379
ATW58153.1 MG018928_p57 hypothetical protein phrog_10749 unknown function unknown function 1 61282 61674
ATW58168.1 MG018928_p72 hypothetical protein singleton unknown function unknown function 1 67912 68034
ATW58164.1 MG018928_p68 hypothetical protein singleton unknown function unknown function 1 65624 65902
ATW58147.1 MG018928_p51 hypothetical protein singleton unknown function unknown function 1 57600 57959
ATW58133.1 MG018928_p37 hypothetical protein phrog_2109 unknown function unknown function -1 51018 51695
ATW58148.1 MG018928_p52 hypothetical protein singleton unknown function unknown function 1 57966 58244
ATW58114.1 MG018928_p18 virion RNA polymerase phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism -1 17362 27777
ATW58171.1 MG018928_p75 hypothetical protein singleton unknown function unknown function 1 69190 69363
ATW58162.1 MG018928_p66 hypothetical protein phrog_21163 unknown function unknown function 1 64365 64580
ATW58134.1 MG018928_p38 hypothetical protein phrog_3934 unknown function unknown function -1 51738 52436
ATW58117.1 MG018928_p21 hypothetical protein phrog_2220 unknown function unknown function -1 30474 33164
ATW58169.1 MG018928_p73 thioredoxin-1 phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 68600 68893
ATW58136.1 MG018928_p40 hypothetical protein singleton unknown function unknown function 1 53145 53612
ATW58105.1 MG018928_p9 hypothetical protein phrog_4521 unknown function unknown function 1 10429 10713
ATW58104.1 MG018928_p8 hypothetical protein phrog_5974 unknown function unknown function 1 10006 10425
ATW58098.1 MG018928_p2 rIIA lysis inhibitor phrog_2979 RIIA lysis inhibitor lysis 1 438 2996
ATW58157.1 MG018928_p61 hypothetical protein phrog_24427 unknown function unknown function 1 62696 62968
ATW58132.1 MG018928_p36 terminase-like family protein phrog_38 terminase large subunit head and packaging -1 49427 51025
ATW58146.1 MG018928_p50 DNA-dependent RNA polymerase phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism 1 56779 57603
ATW58128.1 MG018928_p32 hypothetical protein phrog_16150 tail assembly protein tail -1 41940 43205
ATW58156.1 MG018928_p60 hypothetical protein phrog_17762 unknown function unknown function 1 62356 62676
ATW58103.1 MG018928_p7 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 7349 10009
ATW58143.1 MG018928_p47 hypothetical protein singleton unknown function unknown function 1 55926 56102
ATW58151.1 MG018928_p55 Ig-like domain protein phrog_215 structural protein with Ig domain head and packaging 1 59912 60403
ATW58129.1 MG018928_p33 hypothetical protein phrog_15324 tail sheath and receptor binding protein tail -1 43245 47432