Genomic map of Staphylococcus phage phiSa2wa_st59 (MG029512)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG029512
Definition
Staphylococcus phage phiSa2wa_st59, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Biseptimavirus; unclassified Biseptimavirus.
DB of origin
NUCCORE
Length
42133
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
72
%GC
33.27
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUM57895.1 MG029512_p22 hypothetical protein phrog_2205 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 8289 8825
AUM57892.1 MG029512_p19 hypothetical protein phrog_369 unknown function unknown function 1 7444 7605
AUM57945.1 MG029512_p72 Panton-Valentine leukocidin chain F precursor phrog_965 Panton-Valentine leukocicin DNA, RNA and nucleotide metabolism 1 41030 42013
AUM57877.1 MG029512_p4 hypothetical protein phrog_1176 unknown function unknown function -1 2150 2353
AUM57911.1 MG029512_p38 hypothetical protein phrog_4872 unknown function unknown function 1 15110 15271
AUM57882.1 MG029512_p9 hypothetical protein phrog_847 anti-repressor Ant transcription regulation 1 4001 4444
AUM57919.1 MG029512_p46 hypothetical protein phrog_386 unknown function unknown function 1 17395 17595
AUM57917.1 MG029512_p44 hypothetical protein phrog_5788 unknown function unknown function 1 16586 16738
AUM57924.1 MG029512_p51 portal protein phrog_12 portal protein head and packaging 1 20719 21906
AUM57914.1 MG029512_p41 hypothetical protein phrog_278 transcriptional regulator transcription regulation 1 16071 16259
AUM57935.1 MG029512_p62 hypothetical protein phrog_1963 unknown function unknown function 1 26887 27024
AUM57910.1 MG029512_p37 hypothetical protein phrog_8718 unknown function unknown function 1 14828 15109
AUM57942.1 MG029512_p69 holin phrog_263 holin lysis 1 37894 38241
AUM57893.1 MG029512_p20 hypothetical protein phrog_2182 unknown function unknown function 1 7694 8011
AUM57938.1 MG029512_p65 hypothetical protein phrog_1786 minor head protein head and packaging 1 33122 36907
AUM57875.1 MG029512_p2 hypothetical protein phrog_716 Na/K ATPase other 1 1357 1971
AUM57885.1 MG029512_p12 hypothetical protein phrog_7496 unknown function unknown function 1 4858 5049
AUM57883.1 MG029512_p10 hypothetical protein phrog_1263 unknown function unknown function 1 4459 4599
AUM57896.1 MG029512_p23 hypothetical protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 8826 9476
AUM57937.1 MG029512_p64 hypothetical protein phrog_202 distal tail protein Dit tail 1 31622 33106
AUM57918.1 MG029512_p45 hypothetical protein phrog_5652 unknown function unknown function 1 16745 17395
AUM57909.1 MG029512_p36 hypothetical protein phrog_3898 unknown function unknown function 1 14636 14827
AUM57881.1 MG029512_p8 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 3725 3988
AUM57912.1 MG029512_p39 dUTPase phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 15286 15792
AUM57908.1 MG029512_p35 hypothetical protein phrog_266 unknown function unknown function 1 14404 14664
AUM57902.1 MG029512_p29 hypothetical protein phrog_809 transcriptional regulator transcription regulation 1 12799 12957
AUM57930.1 MG029512_p57 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 24717 25121
AUM57939.1 MG029512_p66 hypothetical protein phrog_1399 unknown function unknown function 1 36897 37049
AUM57916.1 MG029512_p43 transcriptional activator phrog_152 RinB-like transcriptional activator transcription regulation 1 16422 16586
AUM57879.1 MG029512_p6 hypothetical protein phrog_6385 unknown function unknown function -1 2704 2859
AUM57894.1 MG029512_p21 hypothetical protein phrog_401 unknown function unknown function 1 7944 8276
AUM57904.1 MG029512_p31 hypothetical protein phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 13201 13605
AUM57934.1 MG029512_p61 hypothetical protein phrog_187 head-tail adaptor connector 1 26486 26836
AUM57887.1 MG029512_p14 hypothetical protein phrog_63 anti-repressor Ant transcription regulation 1 5339 6091
AUM57880.1 MG029512_p7 hypothetical protein phrog_4 transcriptional repressor transcription regulation -1 2871 3599
AUM57923.1 MG029512_p50 terminase large subunit phrog_9 terminase large subunit head and packaging 1 19042 20703
AUM57915.1 MG029512_p42 hypothetical protein phrog_3885 unknown function unknown function 1 16234 16434
AUM57933.1 MG029512_p60 hypothetical protein phrog_215 structural protein with Ig domain head and packaging 1 26296 26436
AUM57876.1 MG029512_p3 hypothetical protein phrog_787 unknown function unknown function -1 1968 2093
AUM57874.1 MG029512_p1 integrase phrog_1 integrase integration and excision -1 26 1231
AUM57889.1 MG029512_p16 hypothetical protein phrog_6623 unknown function unknown function 1 6598 6924
AUM57929.1 MG029512_p56 hypothetical protein phrog_25 head closure Hc1 connector 1 24358 24720
AUM57922.1 MG029512_p49 hypothetical protein phrog_1066 unknown function unknown function 1 18656 19045
AUM57943.1 MG029512_p70 amidase phrog_489 endolysin lysis 1 38252 39706
AUM57932.1 MG029512_p59 major tail protein phrog_88 major tail protein tail 1 25526 26170
AUM57890.1 MG029512_p17 hypothetical protein phrog_4309 unknown function unknown function 1 6921 7139
AUM57903.1 MG029512_p30 hypothetical protein phrog_433 unknown function unknown function 1 12961 13191
AUM57944.1 MG029512_p71 Panton-Valentine leukocidin chain S precursor phrog_965 Panton-Valentine leukocicin DNA, RNA and nucleotide metabolism 1 40087 41034
AUM57878.1 MG029512_p5 hypothetical protein phrog_5192 unknown function unknown function -1 2532 2744
AUM57928.1 MG029512_p55 hypothetical protein phrog_749 unknown function unknown function 1 24078 24374
AUM57906.1 MG029512_p33 hypothetical protein phrog_201 Panton-Valentine leukocicin DNA, RNA and nucleotide metabolism 1 13796 14152
AUM57927.1 MG029512_p54 hypothetical protein phrog_390 Arc-like repressor transcription regulation 1 23816 24100
AUM57940.1 MG029512_p67 hypothetical protein phrog_1747 unknown function unknown function 1 37096 37383
AUM57886.1 MG029512_p13 hypothetical protein phrog_6634 unknown function unknown function -1 5051 5278
AUM57900.1 MG029512_p27 hypothetical protein phrog_428 replication initiation protein DNA, RNA and nucleotide metabolism 1 11243 12004
AUM57931.1 MG029512_p58 hypothetical protein phrog_78 tail terminator connector 1 25118 25525
AUM57907.1 MG029512_p34 hypothetical protein phrog_258 virulence associated other 1 14156 14398
AUM57898.1 MG029512_p25 hypothetical protein phrog_398 unknown function unknown function 1 9928 10596
AUM57920.1 MG029512_p47 transcriptional activator phrog_36 transcriptional regulator transcription regulation 1 17623 18039
AUM57941.1 MG029512_p68 hypothetical protein phrog_3700 unknown function unknown function 1 37439 37813
AUM57891.1 MG029512_p18 hypothetical protein phrog_534 DNA binding protein DNA, RNA and nucleotide metabolism 1 7169 7432
AUM57899.1 MG029512_p26 hypothetical protein phrog_33458 unknown function unknown function -1 10782 11198
AUM57913.1 MG029512_p40 hypothetical protein phrog_2027 unknown function unknown function 1 15829 16074
AUM57925.1 MG029512_p52 prohead protease phrog_94 head maturation protease head and packaging 1 21878 22627
AUM57905.1 MG029512_p32 hypothetical protein phrog_299 unknown function unknown function 1 13610 13795
AUM57897.1 MG029512_p24 hypothetical protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 9473 9916
AUM57888.1 MG029512_p15 hypothetical protein phrog_6175 unknown function unknown function 1 6104 6364
AUM57884.1 MG029512_p11 hypothetical protein phrog_3505 unknown function unknown function -1 4592 4801
AUM57936.1 MG029512_p63 tail tape measure protein phrog_167 tail length tape measure protein tail 1 27081 31622
AUM57901.1 MG029512_p28 DNA replication protein C phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 12017 12802
AUM57926.1 MG029512_p53 major capsid protein phrog_10 major head protein head and packaging 1 22651 23796
AUM57921.1 MG029512_p48 hypothetical protein phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 18271 18570