| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG030346 |
Definition |
Proteus phage PM87, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
59128 |
Host Name |
Proteus mirabilis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
57 |
%GC |
46.72 |
Number of singletons |
8 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATW69827.1 | MG030346_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 632 | 808 |
| ATW69882.1 | MG030346_p56 | hypothetical protein | phrog_7401 | unknown function | unknown function | 1 | 55345 | 55629 |
| ATW69874.1 | MG030346_p48 | terminase large subunit | phrog_15 | terminase large subunit | head and packaging | -1 | 45973 | 48048 |
| ATW69873.1 | MG030346_p47 | head-to-tail joining protein | phrog_75 | head-tail adaptor Ad1 | connector | -1 | 45685 | 45960 |
| ATW69857.1 | MG030346_p31 | tail fiber protein | phrog_7049 | tail fiber protein | tail | -1 | 25466 | 26209 |
| ATW69865.1 | MG030346_p39 | structural protein | phrog_807 | major tail protein with Ig-like domain | tail | -1 | 38181 | 39368 |
| ATW69844.1 | MG030346_p18 | hypothetical protein | phrog_34189 | unknown function | unknown function | 1 | 13578 | 14210 |
| ATW69879.1 | MG030346_p53 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 52487 | 53089 |
| ATW69864.1 | MG030346_p38 | hypothetical protein | phrog_5260 | tail protein | tail | -1 | 37590 | 38042 |
| ATW69861.1 | MG030346_p35 | tail assembly protein | phrog_778 | tail assembly protein | tail | -1 | 30481 | 31296 |
| ATW69850.1 | MG030346_p24 | lysis protein A | phrog_873 | endolysin | head and packaging | -1 | 17862 | 18641 |
| ATW69854.1 | MG030346_p28 | hypothetical protein | phrog_2448 | unknown function | unknown function | -1 | 22523 | 23539 |
| ATW69837.1 | MG030346_p11 | hypothetical protein | phrog_6647 | unknown function | unknown function | 1 | 8724 | 9155 |
| ATW69839.1 | MG030346_p13 | recombinase | phrog_724 | exonuclease recombination-associated | DNA, RNA and nucleotide metabolism | 1 | 10202 | 11290 |
| ATW69838.1 | MG030346_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9670 | 10215 |
| ATW69852.1 | MG030346_p26 | hypothetical protein | phrog_7226 | unknown function | unknown function | -1 | 18902 | 20887 |
| ATW69870.1 | MG030346_p44 | decorator protein D | phrog_49 | head decoration | head and packaging | -1 | 42338 | 42754 |
| ATW69859.1 | MG030346_p33 | tail assembly protein | phrog_1196 | tail assembly chaperone | tail | -1 | 30023 | 30232 |
| ATW69836.1 | MG030346_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7951 | 8139 |
| ATW69867.1 | MG030346_p41 | hypothetical protein | phrog_27 | tail completion or Neck1 protein | connector | -1 | 39874 | 40491 |
| ATW69832.1 | MG030346_p6 | hypothetical protein | phrog_38602 | unknown function | unknown function | -1 | 4790 | 5530 |
| ATW69842.1 | MG030346_p16 | hypothetical protein | phrog_37274 | unknown function | unknown function | 1 | 12375 | 13142 |
| ATW69853.1 | MG030346_p27 | hypothetical protein | singleton | unknown function | unknown function | -1 | 20891 | 22513 |
| ATW69858.1 | MG030346_p32 | tail assembly protein | phrog_6284 | tail protein | tail | -1 | 26209 | 30030 |
| ATW69828.1 | MG030346_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1179 | 1397 |
| ATW69869.1 | MG030346_p43 | capsid protein E | phrog_29 | major head protein | head and packaging | -1 | 41258 | 42325 |
| ATW69840.1 | MG030346_p14 | hypothetical protein | phrog_7200 | unknown function | unknown function | 1 | 11206 | 11493 |
| ATW69848.1 | MG030346_p22 | hypothetical protein | phrog_30326 | unknown function | unknown function | 1 | 16028 | 16897 |
| ATW69876.1 | MG030346_p50 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 48619 | 50142 |
| ATW69883.1 | MG030346_p57 | primase | phrog_1156 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 55629 | 58304 |
| ATW69851.1 | MG030346_p25 | lysis protein B | singleton | unknown function | unknown function | 1 | 18686 | 18982 |
| ATW69868.1 | MG030346_p42 | hypothetical protein | phrog_38433 | unknown function | unknown function | -1 | 40847 | 41194 |
| ATW69856.1 | MG030346_p30 | hypothetical protein | phrog_2448 | unknown function | unknown function | -1 | 24546 | 25466 |
| ATW69846.1 | MG030346_p20 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14962 | 15126 |
| ATW69863.1 | MG030346_p37 | tape measure protein | phrog_2335 | tail length tape measure protein | tail | -1 | 33012 | 37349 |
| ATW69872.1 | MG030346_p46 | portal protein | phrog_21 | portal protein | head and packaging | -1 | 44042 | 45685 |
| ATW69845.1 | MG030346_p19 | DNA methyltransferase | phrog_111 | DNA methyltransferase | other | 1 | 14207 | 14947 |
| ATW69833.1 | MG030346_p7 | hypothetical protein | singleton | unknown function | unknown function | -1 | 6079 | 6546 |
| ATW69871.1 | MG030346_p45 | prohead protease | phrog_53 | head maturation protease | head and packaging | -1 | 42768 | 44045 |
| ATW69877.1 | MG030346_p51 | VRR-NUC domain-containing protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 50102 | 50389 |
| ATW69830.1 | MG030346_p4 | hypothetical protein | phrog_37849 | unknown function | unknown function | -1 | 3931 | 4152 |
| ATW69880.1 | MG030346_p54 | Cas4-like protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 53121 | 54485 |
| ATW69881.1 | MG030346_p55 | hypothetical protein | phrog_7721 | unknown function | unknown function | -1 | 54510 | 54992 |
| ATW69847.1 | MG030346_p21 | hypothetical protein | phrog_35002 | unknown function | unknown function | 1 | 15249 | 15782 |
| ATW69849.1 | MG030346_p23 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 16894 | 17358 |
| ATW69866.1 | MG030346_p40 | hypothetical protein | phrog_5078 | tail terminator | connector | -1 | 39372 | 39884 |
| ATW69860.1 | MG030346_p34 | tail assembly protein | phrog_1180 | tail assembly chaperone | tail | -1 | 30232 | 30468 |
| ATW69834.1 | MG030346_p8 | hypothetical protein | phrog_22351 | unknown function | unknown function | -1 | 6437 | 7006 |
| ATW69862.1 | MG030346_p36 | tail assembly protein | phrog_1082 | tail assembly protein | tail | -1 | 31318 | 33006 |
| ATW69835.1 | MG030346_p9 | hypothetical protein | phrog_18953 | tail protein | tail | -1 | 7494 | 7697 |
| ATW69843.1 | MG030346_p17 | hypothetical protein | phrog_36634 | unknown function | unknown function | 1 | 13139 | 13585 |
| ATW69875.1 | MG030346_p49 | terminase small subunit | phrog_141 | terminase small subunit | head and packaging | -1 | 48032 | 48616 |
| ATW69829.1 | MG030346_p3 | hypothetical protein | phrog_37646 | unknown function | unknown function | -1 | 2966 | 3769 |
| ATW69831.1 | MG030346_p5 | DNA modification protein Mom-like protein | phrog_1384 | Mom-like DNA modification protein | other | -1 | 4136 | 4786 |
| ATW69878.1 | MG030346_p52 | DNA polymerase I family A | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 50389 | 52422 |
| ATW69841.1 | MG030346_p15 | hypothetical protein | phrog_6886 | unknown function | unknown function | 1 | 11560 | 12378 |
| ATW69855.1 | MG030346_p29 | hypothetical protein | phrog_2448 | unknown function | unknown function | -1 | 23552 | 24535 |