| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG030347 |
Definition |
Proteus phage PM135, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Novosibvirus; Proteus virus PM135. |
DB of origin |
NUCCORE |
Length |
104329 |
Host Name |
Proteus mirabilis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
102 |
%GC |
38.36 |
Number of singletons |
19 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATW69884.1 | MG030347_p1 | terminase small subunit | phrog_3802 | terminase small subunit | head and packaging | 1 | 67 | 558 |
| ATW69956.1 | MG030347_p73 | hypothetical protein | phrog_11405 | unknown function | unknown function | 1 | 73372 | 73527 |
| ATW69924.1 | MG030347_p41 | transcriptional regulator protein | phrog_4053 | transcriptional regulator | transcription regulation | -1 | 43448 | 43786 |
| ATW69943.1 | MG030347_p60 | hypothetical protein | phrog_1460 | tRNA amidotransferase | DNA, RNA and nucleotide metabolism | 1 | 64006 | 64428 |
| ATW69905.1 | MG030347_p22 | deoxyuridine 5'-triphosphate nucleotidohydrolase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | -1 | 25730 | 26191 |
| ATW69964.1 | MG030347_p81 | deoxynucleoside-5'-monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 77936 | 78682 |
| ATW69891.1 | MG030347_p8 | capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7031 | 8455 |
| ATW69914.1 | MG030347_p31 | DNA polymerase | phrog_5995 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 33587 | 34417 |
| ATW69957.1 | MG030347_p74 | H-N-H homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 73911 | 74480 |
| ATW69934.1 | MG030347_p51 | aerobic ribonucleoside diphosphate reductase small subunit | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 57773 | 58876 |
| ATW69907.1 | MG030347_p24 | D14 protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 27061 | 27543 |
| ATW69946.1 | MG030347_p63 | hypothetical protein | phrog_28360 | unknown function | unknown function | 1 | 67906 | 68118 |
| ATW69947.1 | MG030347_p64 | hypothetical protein | phrog_31329 | unknown function | unknown function | 1 | 68187 | 68372 |
| ATW69966.1 | MG030347_p83 | holin | phrog_860 | holin | lysis | 1 | 79437 | 80093 |
| ATW69942.1 | MG030347_p59 | ATP-dependent Clp protease | phrog_5534 | unknown function | unknown function | 1 | 63161 | 64006 |
| ATW69952.1 | MG030347_p69 | hypothetical protein | phrog_10176 | unknown function | unknown function | 1 | 70783 | 71076 |
| ATW69970.1 | MG030347_p87 | hypothetical protein | phrog_3880 | unknown function | unknown function | 1 | 82915 | 83190 |
| ATW69979.1 | MG030347_p96 | DNA transfer protein | phrog_1745 | DNA transfer protein | other | 1 | 98648 | 100366 |
| ATW69948.1 | MG030347_p65 | hypothetical protein | phrog_18736 | unknown function | unknown function | 1 | 68813 | 69148 |
| ATW69885.1 | MG030347_p2 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 561 | 1907 |
| ATW69969.1 | MG030347_p86 | serine/threonine protein phosphatase | phrog_246 | NinI-like serine-threonine phosphatase | other | 1 | 81691 | 82503 |
| ATW69945.1 | MG030347_p62 | hypothetical protein | phrog_1479 | unknown function | unknown function | 1 | 67082 | 67429 |
| ATW69977.1 | MG030347_p94 | hypothetical protein | phrog_16673 | unknown function | unknown function | -1 | 95247 | 96440 |
| ATW69984.1 | MG030347_p101 | hypothetical protein | singleton | unknown function | unknown function | -1 | 103465 | 103740 |
| ATW69930.1 | MG030347_p47 | anaerobic ribonucleoside-triphosphate reductase large subunit | phrog_487 | NrdD-like anaerobic ribonucleotide reductase large subunit | moron, auxiliary metabolic gene and host takeover | -1 | 50507 | 52372 |
| ATW69974.1 | MG030347_p91 | hypothetical protein | singleton | unknown function | unknown function | 1 | 88596 | 89054 |
| ATW69887.1 | MG030347_p4 | nicking site-specific endonuclease | phrog_3497 | unknown function | unknown function | 1 | 4098 | 4634 |
| ATW69972.1 | MG030347_p89 | hypothetical protein | phrog_4605 | unknown function | unknown function | 1 | 84837 | 85313 |
| ATW69909.1 | MG030347_p26 | recombinase | phrog_100 | SbcD-like subunit of palindrome specific endonuclease | DNA, RNA and nucleotide metabolism | -1 | 29384 | 30391 |
| ATW69932.1 | MG030347_p49 | aerobic ribonucleoside diphosphate reductase large subunit | singleton | unknown function | unknown function | 1 | 53400 | 53606 |
| ATW69920.1 | MG030347_p37 | DNA ligase subunit B | phrog_3498 | NAD-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 40641 | 41393 |
| ATW69938.1 | MG030347_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 60990 | 61340 |
| ATW69950.1 | MG030347_p67 | hypothetical protein | phrog_7042 | unknown function | unknown function | 1 | 70441 | 70611 |
| ATW69906.1 | MG030347_p23 | flap endonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 26195 | 27061 |
| ATW69959.1 | MG030347_p76 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | 1 | 75227 | 75619 |
| ATW69941.1 | MG030347_p58 | cell wall hydrolase | phrog_938 | endolysin | lysis | 1 | 62717 | 63148 |
| ATW69935.1 | MG030347_p52 | dihydrofolate reductase | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | 1 | 58873 | 59412 |
| ATW69967.1 | MG030347_p84 | peptidoglycan hydrolase | phrog_1259 | baseplate hub subunit and tail lysozyme | tail | 1 | 80102 | 80608 |
| ATW69958.1 | MG030347_p75 | hypothetical protein | singleton | unknown function | unknown function | 1 | 74837 | 75223 |
| ATW69939.1 | MG030347_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 61312 | 61506 |
| ATW69936.1 | MG030347_p53 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 59413 | 60282 |
| ATW69954.1 | MG030347_p71 | hypothetical protein | phrog_25347 | unknown function | unknown function | 1 | 72590 | 72982 |
| ATW69963.1 | MG030347_p80 | hypothetical protein | phrog_812 | Rz-like spanin | lysis | 1 | 77625 | 77939 |
| ATW69976.1 | MG030347_p93 | hypothetical protein | singleton | unknown function | unknown function | -1 | 93549 | 94034 |
| ATW69896.1 | MG030347_p13 | minor tail protein | phrog_3889 | base plate tail tube protein | tail | 1 | 11434 | 12342 |
| ATW69890.1 | MG030347_p7 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 6413 | 7018 |
| ATW69912.1 | MG030347_p29 | ATP-dependent helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 31709 | 33103 |
| ATW69900.1 | MG030347_p17 | distal tail protein | phrog_1302 | distal tail protein | tail | 1 | 17112 | 17726 |
| ATW69897.1 | MG030347_p14 | hypothetical protein | phrog_313 | Tail assembly chaperone | tail | 1 | 12339 | 12764 |
| ATW69901.1 | MG030347_p18 | tail length tape-measure protein | phrog_31 | central tail fiber J | tail | 1 | 17726 | 20602 |
| ATW69926.1 | MG030347_p43 | D2 protein | phrog_3611 | helicase | DNA, RNA and nucleotide metabolism | -1 | 44869 | 45588 |
| ATW69919.1 | MG030347_p36 | D5 protein | phrog_323 | transcriptional regulator, D5-like | transcription regulation | -1 | 39869 | 40636 |
| ATW69951.1 | MG030347_p68 | hypothetical protein | singleton | unknown function | unknown function | 1 | 70608 | 70790 |
| ATW69981.1 | MG030347_p98 | deoxynucleoside-5'-monophosphatase | phrog_415 | polynucleotide kinase | other | 1 | 101306 | 102025 |
| ATW69940.1 | MG030347_p57 | metallopeptidase | phrog_255 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 61537 | 62295 |
| ATW69937.1 | MG030347_p54 | ribonuclease H | phrog_531 | Rnase H | DNA, RNA and nucleotide metabolism | 1 | 60383 | 60856 |
| ATW69892.1 | MG030347_p9 | head completion protein | phrog_442 | head-tail adaptor | connector | 1 | 8504 | 9004 |
| ATW69978.1 | MG030347_p95 | A2 protein | phrog_1725 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 98018 | 98467 |
| ATW69886.1 | MG030347_p3 | receptor-binding tail protein | phrog_4815 | receptor binding tail protein | tail | 1 | 1917 | 3977 |
| ATW69923.1 | MG030347_p40 | hypothetical protein | phrog_768 | DprA-like DNA recombination-mediator protein | DNA, RNA and nucleotide metabolism | -1 | 42736 | 43368 |
| ATW69888.1 | MG030347_p5 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 4790 | 5905 |
| ATW69895.1 | MG030347_p12 | Ig-like domain protein | phrog_3575 | major tail protein | tail | 1 | 10288 | 11430 |
| ATW69968.1 | MG030347_p85 | hypothetical protein | phrog_4328 | unknown function | unknown function | 1 | 81262 | 81675 |
| ATW69908.1 | MG030347_p25 | nuclease | phrog_77 | SbcC-like subunit of palindrome specific endonuclease | DNA, RNA and nucleotide metabolism | -1 | 27544 | 29397 |
| ATW69889.1 | MG030347_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5898 | 6413 |
| ATW69971.1 | MG030347_p88 | hypothetical protein | phrog_4215 | unknown function | unknown function | 1 | 84424 | 84840 |
| ATW69955.1 | MG030347_p72 | hypothetical protein | phrog_21538 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 72999 | 73190 |
| ATW69899.1 | MG030347_p16 | pore-forming tail tip protein | phrog_3779 | tail length tape measure protein | tail | 1 | 13300 | 16998 |
| ATW69961.1 | MG030347_p78 | hypothetical protein | phrog_27961 | unknown function | unknown function | 1 | 76842 | 77267 |
| ATW69983.1 | MG030347_p100 | hypothetical protein | singleton | unknown function | unknown function | -1 | 103226 | 103465 |
| ATW69929.1 | MG030347_p46 | replication origin binding protein | phrog_3712 | replication origin binding | DNA, RNA and nucleotide metabolism | -1 | 46199 | 48976 |
| ATW69973.1 | MG030347_p90 | hypothetical protein | singleton | unknown function | unknown function | 1 | 87880 | 88269 |
| ATW69910.1 | MG030347_p27 | D11 protein | phrog_1607 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 30438 | 31220 |
| ATW69917.1 | MG030347_p34 | DNA replication primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 37387 | 38268 |
| ATW69980.1 | MG030347_p97 | hypothetical protein | singleton | unknown function | unknown function | 1 | 100414 | 100716 |
| ATW69894.1 | MG030347_p11 | tail terminator protein | phrog_3907 | tail terminator | connector | 1 | 9774 | 10271 |
| ATW69953.1 | MG030347_p70 | hypothetical protein | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 71403 | 71924 |
| ATW69918.1 | MG030347_p35 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 38265 | 39770 |
| ATW69922.1 | MG030347_p39 | DNA ligase subunit A | phrog_3359 | NAD-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 41738 | 42736 |
| ATW69915.1 | MG030347_p32 | hypothetical protein | phrog_4645 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 34479 | 35264 |
| ATW69931.1 | MG030347_p48 | phosphate starvation-inducible protein | phrog_170 | PhoH-like phosphate starvation-inducible | other | 1 | 52672 | 53400 |
| ATW69965.1 | MG030347_p82 | ATP-dependent Clp protease | phrog_1827 | ATP-dependent protease | other | 1 | 78684 | 79277 |
| ATW69985.1 | MG030347_p102 | hypothetical protein | phrog_17187 | unknown function | unknown function | -1 | 103743 | 104300 |
| ATW69949.1 | MG030347_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 69478 | 69735 |
| ATW69898.1 | MG030347_p15 | tape measure chaperone | phrog_3914 | tail assembly chaperone | tail | 1 | 12835 | 13212 |
| ATW69975.1 | MG030347_p92 | hypothetical protein | singleton | unknown function | unknown function | 1 | 89667 | 90650 |
| ATW69982.1 | MG030347_p99 | hypothetical protein | singleton | unknown function | unknown function | -1 | 102474 | 102821 |
| ATW69960.1 | MG030347_p77 | hypothetical protein | phrog_8729 | unknown function | unknown function | 1 | 76116 | 76388 |
| ATW69904.1 | MG030347_p21 | tail fiber protein | phrog_22285 | tail fiber protein | tail | 1 | 23104 | 25689 |
| ATW69902.1 | MG030347_p19 | straight tail fibers protein | phrog_3890 | straight fibre tail protein | tail | 1 | 20595 | 22700 |
| ATW69913.1 | MG030347_p30 | hypothetical protein | phrog_4386 | unknown function | unknown function | -1 | 33100 | 33600 |
| ATW69921.1 | MG030347_p38 | hypothetical protein | singleton | unknown function | unknown function | -1 | 41578 | 41745 |
| ATW69933.1 | MG030347_p50 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57102 | 57437 |
| ATW69928.1 | MG030347_p45 | hypothetical protein | singleton | unknown function | unknown function | -1 | 45958 | 46107 |
| ATW69911.1 | MG030347_p28 | hypothetical protein | phrog_4258 | unknown function | unknown function | -1 | 31222 | 31500 |
| ATW69903.1 | MG030347_p20 | L-shaped tail fiber assembly protein | phrog_1084 | unknown function | unknown function | 1 | 22697 | 23107 |
| ATW69944.1 | MG030347_p61 | hypothetical protein | phrog_8792 | unknown function | unknown function | 1 | 66555 | 66902 |
| ATW69962.1 | MG030347_p79 | hypothetical protein | singleton | unknown function | unknown function | 1 | 77251 | 77661 |
| ATW69925.1 | MG030347_p42 | hypothetical protein | phrog_3696 | unknown function | unknown function | -1 | 43767 | 44096 |
| ATW69916.1 | MG030347_p33 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 35516 | 37321 |
| ATW69927.1 | MG030347_p44 | hypothetical protein | phrog_464 | unknown function | unknown function | -1 | 45581 | 45925 |
| ATW69893.1 | MG030347_p10 | tail completion protein | phrog_3725 | tail completion or Neck1 protein | connector | 1 | 9004 | 9777 |