Genomic map of Escherichia phage DTL (MG050172)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG050172
Definition
Escherichia phage DTL, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Braunvirinae; Loudonvirus; Escherichia virus DTL.
DB of origin
NUCCORE
Length
45814
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
60
%GC
44.25
Number of singletons
3
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATW61778.1 MG050172_p1 hypothetical protein phrog_2817 unknown function unknown function 1 1 249
ATW61832.1 MG050172_p55 hypothetical protein phrog_2856 transcriptional regulator transcription regulation -1 41496 41969
ATW61804.1 MG050172_p27 hypothetical protein phrog_1989 unknown function unknown function 1 16957 17475
ATW61787.1 MG050172_p10 hypothetical protein phrog_2684 unknown function unknown function -1 5734 6087
ATW61805.1 MG050172_p28 hypothetical protein singleton unknown function unknown function 1 18608 18784
ATW61800.1 MG050172_p23 terminase small subunit phrog_606 terminase small subunit head and packaging 1 12464 12970
ATW61836.1 MG050172_p59 hypothetical protein phrog_6031 unknown function unknown function 1 45040 45234
ATW61831.1 MG050172_p54 endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 40964 41443
ATW61811.1 MG050172_p34 hypothetical protein phrog_179 tail terminator connector 1 21387 21788
ATW61827.1 MG050172_p50 recombinase phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 36620 37270
ATW61819.1 MG050172_p42 minor tail protein phrog_30 minor tail protein tail 1 28358 29116
ATW61812.1 MG050172_p35 major tail protein singleton unknown function unknown function 1 22080 22472
ATW61780.1 MG050172_p3 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 586 1722
ATW61785.1 MG050172_p8 hypothetical protein phrog_2794 unknown function unknown function -1 3737 4072
ATW61806.1 MG050172_p29 major capsid protein phrog_264 major head protein head and packaging 1 18877 19818
ATW61823.1 MG050172_p46 hypothetical protein phrog_4281 unknown function unknown function -1 34124 34321
ATW61779.1 MG050172_p2 hypothetical protein phrog_4596 unknown function unknown function 1 252 503
ATW61781.1 MG050172_p4 hypothetical protein phrog_4788 unknown function unknown function 1 2349 2525
ATW61802.1 MG050172_p25 portal protein phrog_146 portal protein head and packaging 1 14610 15875
ATW61783.1 MG050172_p6 endolysin phrog_7 endolysin lysis 1 2872 3357
ATW61814.1 MG050172_p37 hypothetical protein phrog_569 tail length tape measure protein tail 1 22870 23184
ATW61817.1 MG050172_p40 minor tail protein phrog_14 minor tail protein tail 1 26547 26897
ATW61821.1 MG050172_p44 tail fiber protein phrog_31 central tail fiber J tail 1 29711 33136
ATW61830.1 MG050172_p53 primase phrog_510 DNA primase DNA, RNA and nucleotide metabolism -1 40044 40967
ATW61834.1 MG050172_p57 endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44067 44540
ATW61829.1 MG050172_p52 tail fiber protein phrog_16641 tail fiber protein tail -1 38580 39956
ATW61791.1 MG050172_p14 hypothetical protein phrog_9053 unknown function unknown function -1 7340 7516
ATW61782.1 MG050172_p5 holin phrog_2877 holin lysis 1 2578 2871
ATW61803.1 MG050172_p26 prohead protease phrog_530 head maturation protease head and packaging 1 15856 16944
ATW61786.1 MG050172_p9 hypothetical protein phrog_2373 DNA helicase DNA, RNA and nucleotide metabolism -1 4076 5659
ATW61825.1 MG050172_p48 endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 35110 35583
ATW61789.1 MG050172_p12 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 6569 7090
ATW61816.1 MG050172_p39 tape measure protein phrog_24 tail length tape measure protein tail 1 23540 26515
ATW61790.1 MG050172_p13 hypothetical protein phrog_4448 unknown function unknown function -1 7090 7329
ATW61793.1 MG050172_p16 hypothetical protein phrog_7327 unknown function unknown function 1 8671 9093
ATW61799.1 MG050172_p22 hypothetical protein singleton unknown function unknown function 1 12092 12352
ATW61822.1 MG050172_p45 hypothetical protein phrog_1265 membrane protein moron, auxiliary metabolic gene and host takeover -1 33168 34124
ATW61833.1 MG050172_p56 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 42071 44065
ATW61837.1 MG050172_p60 hypothetical protein phrog_2676 unknown function unknown function 1 45328 45693
ATW61815.1 MG050172_p38 hypothetical protein phrog_680 tail length tape measure protein tail 1 23193 23504
ATW61828.1 MG050172_p51 hypothetical protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 37312 37734
ATW61795.1 MG050172_p18 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 10339 10722
ATW61810.1 MG050172_p33 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 20960 21397
ATW61792.1 MG050172_p15 hypothetical protein phrog_4841 unknown function unknown function 1 8192 8671
ATW61796.1 MG050172_p19 hypothetical protein phrog_16063 unknown function unknown function 1 10796 11026
ATW61809.1 MG050172_p32 hypothetical protein phrog_161 head closure Hc1 connector 1 20596 20967
ATW61824.1 MG050172_p47 hypothetical protein phrog_5247 unknown function unknown function 1 34860 35108
ATW61818.1 MG050172_p41 endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 27879 28364
ATW61801.1 MG050172_p24 terminase large subunit phrog_38 terminase large subunit head and packaging 1 12990 14561
ATW61820.1 MG050172_p43 tail assembly protein phrog_32 tail assembly protein tail 1 29097 29669
ATW61807.1 MG050172_p30 hypothetical protein phrog_2716 unknown function unknown function 1 19911 20156
ATW61798.1 MG050172_p21 hypothetical protein phrog_303 unknown function unknown function 1 11247 11486
ATW61797.1 MG050172_p20 hypothetical protein phrog_3955 unknown function unknown function 1 11023 11172
ATW61784.1 MG050172_p7 hypothetical protein phrog_1804 Rz-like spanin lysis 1 3360 3722
ATW61808.1 MG050172_p31 hypothetical protein phrog_302 virion structural protein head and packaging 1 20198 20599
ATW61788.1 MG050172_p11 hypothetical protein phrog_4548 unknown function unknown function -1 6399 6566
ATW61813.1 MG050172_p36 hypothetical protein phrog_22925 unknown function unknown function 1 22583 22831
ATW61826.1 MG050172_p49 exonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 35573 36550
ATW61794.1 MG050172_p17 hypothetical protein phrog_31701 unknown function unknown function 1 10075 10326
ATW61835.1 MG050172_p58 hypothetical protein phrog_824 unknown function unknown function 1 44530 44961