Genomic map of Mycobacterium phage AgentM (MG099934)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG099934
Definition
Mycobacterium phage AgentM, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
50503
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
85
%GC
60.88
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATW61267.1 MG099934_p78 hypothetical protein phrog_2124 unknown function unknown function -1 46257 46397
ATW61238.1 MG099934_p49 hypothetical protein phrog_5242 unknown function unknown function -1 36921 37187
ATW61245.1 MG099934_p56 hypothetical protein phrog_4670 unknown function unknown function -1 39045 39179
ATW61265.1 MG099934_p76 hypothetical protein phrog_6186 unknown function unknown function -1 45512 46138
ATW61262.1 MG099934_p73 hypothetical protein phrog_5561 unknown function unknown function -1 44775 44954
ATW61201.1 MG099934_p12 major capsid protein phrog_10 major head protein head and packaging 1 10877 11809
ATW61258.1 MG099934_p69 membrane protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 43817 44113
ATW61243.1 MG099934_p54 hypothetical protein phrog_6549 unknown function unknown function -1 38606 38824
ATW61240.1 MG099934_p51 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37471 38130
ATW61271.1 MG099934_p82 hypothetical protein phrog_6093 unknown function unknown function -1 48204 48350
ATW61263.1 MG099934_p74 hypothetical protein phrog_5476 unknown function unknown function -1 44957 45298
ATW61275.1 MG099934_p1 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 504 803
ATW61246.1 MG099934_p57 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39199 39657
ATW61228.1 MG099934_p39 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 30757 31476
ATW61248.1 MG099934_p59 hypothetical protein phrog_4539 unknown function unknown function -1 39803 39901
ATW61221.1 MG099934_p32 hypothetical protein phrog_6992 unknown function unknown function -1 27048 27221
ATW61259.1 MG099934_p70 hypothetical protein phrog_1178 unknown function unknown function -1 44114 44359
ATW61268.1 MG099934_p79 ArdA-like antirestriction protein phrog_2059 anti-restriction protein moron, auxiliary metabolic gene and host takeover -1 46414 46929
ATW61241.1 MG099934_p52 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 37940 38350
ATW61219.1 MG099934_p30 membrane protein phrog_733 excisionase integration and excision 1 26023 26442
ATW61234.1 MG099934_p45 helix-turn-helix DNA binding domain protein phrog_354 sigma-K factor transcription regulation -1 34651 35277
ATW61222.1 MG099934_p33 hypothetical protein phrog_542 unknown function unknown function -1 27230 27388
ATW61212.1 MG099934_p23 minor tail protein phrog_110 minor tail protein tail 1 19734 21533
ATW61232.1 MG099934_p43 hypothetical protein phrog_1454 unknown function unknown function -1 34327 34563
ATW61198.1 MG099934_p9 portal protein phrog_104 portal protein head and packaging 1 8017 9450
ATW61197.1 MG099934_p8 terminase phrog_9 terminase large subunit head and packaging 1 6239 8017
ATW61249.1 MG099934_p60 hypothetical protein phrog_6893 unknown function unknown function -1 39894 39977
ATW61273.1 MG099934_p84 hypothetical protein phrog_1445 unknown function unknown function -1 48822 48983
ATW61237.1 MG099934_p48 hypothetical protein phrog_4195 unknown function unknown function -1 36505 36924
ATW61255.1 MG099934_p66 exonuclease/helicase phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 41902 42717
ATW61196.1 MG099934_p7 lysin B phrog_102 endolysin lysis 1 5433 6242
ATW61207.1 MG099934_p18 major tail protein phrog_117 major tail protein tail 1 13583 14410
ATW61252.1 MG099934_p63 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 40521 41327
ATW61229.1 MG099934_p40 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 31532 32065
ATW61215.1 MG099934_p26 minor tail protein phrog_404 minor tail protein tail 1 22303 22623
ATW61217.1 MG099934_p28 hypothetical protein phrog_2235 minor tail protein tail 1 24027 24311
ATW61203.1 MG099934_p14 head-to-tail connector protein phrog_2348 unknown function unknown function 1 12249 12389
ATW61236.1 MG099934_p47 hypothetical protein phrog_1167 phosphofructokinase other -1 36041 36508
ATW61195.1 MG099934_p6 lysin A phrog_1512 endolysin lysis 1 4522 5436
ATW61231.1 MG099934_p42 hypothetical protein phrog_499 unknown function unknown function -1 34157 34327
ATW61192.1 MG099934_p3 minor tail protein phrog_1260 minor tail protein tail 1 1396 2358
ATW61224.1 MG099934_p35 hypothetical protein phrog_5282 unknown function unknown function -1 27928 28212
ATW61191.1 MG099934_p2 hypothetical protein phrog_226 minor tail protein tail 1 841 1290
ATW61208.1 MG099934_p20 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 14521 14901
ATW61270.1 MG099934_p81 hypothetical protein phrog_3906 unknown function unknown function -1 47279 48112
ATW61199.1 MG099934_p10 capsid maturation protease phrog_193 head maturation protease head and packaging 1 9447 10286
ATW61211.1 MG099934_p22 minor tail protein phrog_106 minor tail protein tail 1 18724 19737
ATW61239.1 MG099934_p50 hypothetical protein phrog_5270 unknown function unknown function -1 37184 37474
ATW61254.1 MG099934_p65 hypothetical protein phrog_642 unknown function unknown function -1 41596 41898
ATW61269.1 MG099934_p80 hypothetical protein phrog_5927 unknown function unknown function -1 46947 47162
ATW61257.1 MG099934_p68 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 43021 43551
ATW61210.1 MG099934_p21 tape measure protein phrog_305 tail length tape measure protein tail 1 15319 18660
ATW61220.1 MG099934_p31 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 26542 27051
ATW61205.1 MG099934_p16 head-to-tail connector protein phrog_321 tail completion or Neck1 protein connector 1 12748 13161
ATW61214.1 MG099934_p25 minor tail protein phrog_981 minor tail protein tail 1 22004 22306
ATW61260.1 MG099934_p71 hypothetical protein phrog_5066 unknown function unknown function -1 44356 44610
ATW61266.1 MG099934_p77 hypothetical protein phrog_1477 unknown function unknown function -1 46135 46275
ATW61253.1 MG099934_p64 hypothetical protein phrog_520 unknown function unknown function -1 41370 41621
ATW61227.1 MG099934_p38 helix-turn-helix DNA binding domain protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 30501 30764
ATW61274.1 MG099934_p85 hypothetical protein phrog_8568 unknown function unknown function -1 49778 50011
ATW61226.1 MG099934_p37 hypothetical protein phrog_762 unknown function unknown function -1 30118 30504
ATW61261.1 MG099934_p72 hypothetical protein phrog_6322 unknown function unknown function -1 44610 44762
ATW61250.1 MG099934_p61 hypothetical protein phrog_1498 unknown function unknown function -1 39974 40126
ATW61247.1 MG099934_p58 hypothetical protein phrog_13032 unknown function unknown function -1 39658 39813
ATW61251.1 MG099934_p62 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 40123 40512
ATW61213.1 MG099934_p24 minor tail protein phrog_352 minor tail protein tail 1 21547 22011
ATW61223.1 MG099934_p34 hypothetical protein phrog_383 unknown function unknown function -1 27477 27938
ATW61264.1 MG099934_p75 hypothetical protein phrog_6649 unknown function unknown function -1 45295 45501
ATW61204.1 MG099934_p15 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 12386 12748
ATW61216.1 MG099934_p27 minor tail protein phrog_2683 minor tail protein tail 1 22620 24017
ATW61256.1 MG099934_p67 hypothetical protein phrog_5957 unknown function unknown function -1 42714 43004
ATW61218.1 MG099934_p29 integrase phrog_95 integrase integration and excision -1 24363 25856
ATW61233.1 MG099934_p44 hypothetical protein phrog_5897 unknown function unknown function -1 34556 34651
ATW61206.1 MG099934_p17 head-to-tail connector protein phrog_123 tail terminator connector 1 13161 13568
ATW61209.1 MG099934_p19 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 14521 15314
ATW61230.1 MG099934_p41 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 32091 34160
ATW61235.1 MG099934_p46 phosphoesterase phrog_221 metallo-phosphoesterase other -1 35274 36044
ATW61193.1 MG099934_p4 minor tail protein phrog_1197 tail protein tail 1 2343 3680
ATW61200.1 MG099934_p11 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 10341 10850
ATW61194.1 MG099934_p5 hypothetical protein phrog_356 minor tail protein tail 1 3698 4345
ATW61272.1 MG099934_p83 hypothetical protein phrog_6340 unknown function unknown function -1 48353 48766
ATW61244.1 MG099934_p55 hypothetical protein phrog_10096 unknown function unknown function -1 38824 39048
ATW61225.1 MG099934_p36 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 28245 30104
ATW61202.1 MG099934_p13 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 11878 12252
ATW61242.1 MG099934_p53 hypothetical protein phrog_5993 unknown function unknown function -1 38352 38609