| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG099936 |
Definition |
Mycobacterium phage Andies, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nclasvirinae; Charlievirus; unclassified Charlievirus. |
DB of origin |
NUCCORE |
Length |
43779 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
65 |
%GC |
66.17 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATW61040.1 | MG099936_p7 | head-to-tail connector protein | phrog_7530 | unknown function | unknown function | 1 | 5730 | 5963 |
| ATW61050.1 | MG099936_p17 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 13265 | 14986 |
| ATW61064.1 | MG099936_p31 | membrane protein | phrog_16337 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 25991 | 26518 |
| ATW61051.1 | MG099936_p18 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14986 | 16695 |
| ATW61060.1 | MG099936_p27 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 23908 | 24288 |
| ATW61045.1 | MG099936_p12 | head-to-tail connector protein | phrog_813 | head-tail adaptor | connector | 1 | 7343 | 7762 |
| ATW61048.1 | MG099936_p14 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 9036 | 9942 |
| ATW61069.1 | MG099936_p36 | hypothetical protein | phrog_3507 | unknown function | unknown function | 1 | 28648 | 28995 |
| ATW61090.1 | MG099936_p57 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 39441 | 39602 |
| ATW61088.1 | MG099936_p55 | HNH endonuclease | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 38900 | 39301 |
| ATW61085.1 | MG099936_p52 | DNA helicase/methylase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 35603 | 38227 |
| ATW61057.1 | MG099936_p24 | membrane protein | phrog_1172 | unknown function | unknown function | 1 | 21768 | 21941 |
| ATW61052.1 | MG099936_p19 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 16711 | 17553 |
| ATW61046.1 | MG099936_p13 | major tail protein | phrog_476 | major tail protein | tail | 1 | 7877 | 8935 |
| ATW61041.1 | MG099936_p8 | head-to-tail connector protein | phrog_442 | head-tail adaptor | connector | 1 | 5956 | 6441 |
| ATW61087.1 | MG099936_p54 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 38349 | 38900 |
| ATW61055.1 | MG099936_p22 | hypothetical protein | phrog_6374 | unknown function | unknown function | 1 | 21243 | 21392 |
| ATW61086.1 | MG099936_p53 | hypothetical protein | phrog_2001 | unknown function | unknown function | 1 | 38224 | 38349 |
| ATW61081.1 | MG099936_p48 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 34452 | 34700 |
| ATW61067.1 | MG099936_p34 | immunity repressor | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 27913 | 28284 |
| ATW61070.1 | MG099936_p37 | membrane protein | phrog_26034 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 28992 | 29165 |
| ATW61037.1 | MG099936_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2249 | 3538 |
| ATW61047.1 | MG099936_p15 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9036 | 9566 |
| ATW61076.1 | MG099936_p43 | WhiB family transcription factor | phrog_1333 | unknown function | unknown function | 1 | 30998 | 31630 |
| ATW61074.1 | MG099936_p41 | hypothetical protein | phrog_16008 | unknown function | unknown function | 1 | 30361 | 30732 |
| ATW61094.1 | MG099936_p61 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 41666 | 42331 |
| ATW61042.1 | MG099936_p9 | head-to-tail connector protein | phrog_1531 | head closure | connector | 1 | 6438 | 6782 |
| ATW61035.1 | MG099936_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 501 | 2036 |
| ATW61079.1 | MG099936_p46 | hypothetical protein | phrog_4387 | unknown function | unknown function | 1 | 33704 | 34066 |
| ATW61038.1 | MG099936_p5 | capsid maturation protease | phrog_80 | head maturation protease | head and packaging | 1 | 3538 | 4344 |
| ATW61098.1 | MG099936_p65 | HNH endonuclease | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 43293 | 43592 |
| ATW61044.1 | MG099936_p11 | head-to-tail connector protein | phrog_2325 | minor tail protein | tail | 1 | 6975 | 7346 |
| ATW61072.1 | MG099936_p39 | hypothetical protein | phrog_9601 | unknown function | unknown function | 1 | 29715 | 29969 |
| ATW61066.1 | MG099936_p33 | integrase | phrog_1 | integrase | integration and excision | -1 | 26936 | 27907 |
| ATW61092.1 | MG099936_p59 | hypothetical protein | phrog_3599 | unknown function | unknown function | 1 | 40492 | 41094 |
| ATW61082.1 | MG099936_p49 | hypothetical protein | phrog_6650 | unknown function | unknown function | 1 | 34697 | 35098 |
| ATW61080.1 | MG099936_p47 | resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 34063 | 34455 |
| ATW61039.1 | MG099936_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4372 | 5664 |
| ATW61089.1 | MG099936_p56 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 39301 | 39444 |
| ATW61053.1 | MG099936_p20 | minor tail protein | phrog_746 | minor tail protein | tail | 1 | 17553 | 20192 |
| ATW61084.1 | MG099936_p51 | hypothetical protein | phrog_5505 | unknown function | unknown function | 1 | 35388 | 35606 |
| ATW61034.1 | MG099936_p1 | terminase small subunit | phrog_6975 | unknown function | unknown function | 1 | 64 | 504 |
| ATW61061.1 | MG099936_p28 | hypothetical protein | phrog_3243 | unknown function | unknown function | 1 | 24562 | 25494 |
| ATW61062.1 | MG099936_p29 | membrane protein | phrog_12868 | unknown function | unknown function | 1 | 25454 | 25657 |
| ATW61096.1 | MG099936_p63 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 42675 | 43073 |
| ATW61043.1 | MG099936_p10 | head-to-tail connector protein | phrog_8006 | neck protein | connector | 1 | 6794 | 6988 |
| ATW61054.1 | MG099936_p21 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 20194 | 21228 |
| ATW61091.1 | MG099936_p58 | hypothetical protein | phrog_2149 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 39602 | 40495 |
| ATW61071.1 | MG099936_p38 | hypothetical protein | phrog_5081 | unknown function | unknown function | 1 | 29162 | 29656 |
| ATW61068.1 | MG099936_p35 | excise | phrog_4583 | transcriptional repressor | transcription regulation | 1 | 28370 | 28651 |
| ATW61075.1 | MG099936_p42 | hypothetical protein | phrog_8273 | unknown function | unknown function | 1 | 30729 | 31001 |
| ATW61065.1 | MG099936_p32 | membrane protein | phrog_1712 | unknown function | unknown function | -1 | 26561 | 26902 |
| ATW61073.1 | MG099936_p40 | membrane protein | phrog_549 | unknown function | unknown function | 1 | 29966 | 30364 |
| ATW61095.1 | MG099936_p62 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 42454 | 42678 |
| ATW61078.1 | MG099936_p45 | ssDNA binding protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 32643 | 33707 |
| ATW61093.1 | MG099936_p60 | hypothetical protein | phrog_15405 | unknown function | unknown function | 1 | 41091 | 41669 |
| ATW61056.1 | MG099936_p23 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 21409 | 21771 |
| ATW61063.1 | MG099936_p30 | hypothetical protein | phrog_16062 | unknown function | unknown function | -1 | 25679 | 25876 |
| ATW61049.1 | MG099936_p16 | tape measure protein | phrog_2337 | tail length tape measure protein | tail | 1 | 10123 | 13263 |
| ATW61083.1 | MG099936_p50 | hypothetical protein | phrog_11218 | unknown function | unknown function | 1 | 35095 | 35388 |
| ATW61058.1 | MG099936_p25 | lysin A | phrog_1519 | endolysin | lysis | 1 | 22011 | 23510 |
| ATW61077.1 | MG099936_p44 | endonuclease | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 31627 | 32637 |
| ATW61036.1 | MG099936_p3 | hypothetical protein | phrog_6750 | unknown function | unknown function | 1 | 2029 | 2235 |
| ATW61097.1 | MG099936_p64 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 43070 | 43315 |
| ATW61059.1 | MG099936_p26 | holin | phrog_526 | holin | lysis | 1 | 23507 | 23911 |