| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG099939 |
Definition |
Gordonia phage BENtherdunthat, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Langleyhallvirinae; Getalongvirus; Gordonia virus BENtherdunthat. |
DB of origin |
NUCCORE |
Length |
54867 |
Host Name |
Gordonia terrae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
102 |
%GC |
63.36 |
Number of singletons |
28 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATW60852.1 | MG099939_p82 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46359 | 46736 |
| ATW60799.1 | MG099939_p29 | hypothetical protein | phrog_2683 | minor tail protein | tail | 1 | 22118 | 23152 |
| ATW60790.1 | MG099939_p20 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16428 | 18125 |
| ATW60835.1 | MG099939_p65 | nucleotide pyrophosphohydrolase | phrog_4826 | unknown function | unknown function | 1 | 39869 | 40288 |
| ATW60837.1 | MG099939_p67 | hypothetical protein | phrog_23212 | unknown function | unknown function | 1 | 40515 | 40748 |
| ATW60834.1 | MG099939_p64 | hypothetical protein | phrog_34964 | unknown function | unknown function | 1 | 39645 | 39872 |
| ATW60868.1 | MG099939_p98 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53066 | 53254 |
| ATW60777.1 | MG099939_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4897 | 5835 |
| ATW60776.1 | MG099939_p6 | scaffolding protein | phrog_3760 | head scaffolding protein | head and packaging | 1 | 4327 | 4878 |
| ATW60805.1 | MG099939_p35 | minor tail protein | phrog_17388 | minor tail protein | tail | 1 | 25903 | 28089 |
| ATW60786.1 | MG099939_p15 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 8335 | 9014 |
| ATW60846.1 | MG099939_p76 | hypothetical protein | phrog_8105 | unknown function | unknown function | 1 | 43974 | 44288 |
| ATW60771.1 | MG099939_p1 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 39 | 371 |
| ATW60791.1 | MG099939_p21 | minor tail protein | singleton | unknown function | unknown function | 1 | 18134 | 18616 |
| ATW60858.1 | MG099939_p88 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 48114 | 48911 |
| ATW60775.1 | MG099939_p5 | capsid assembly protease | phrog_193 | head maturation protease | head and packaging | 1 | 3599 | 4243 |
| ATW60772.1 | MG099939_p2 | terminase small subunit | phrog_4479 | terminase small subunit | head and packaging | 1 | 441 | 701 |
| ATW60841.1 | MG099939_p71 | hypothetical protein | phrog_27511 | unknown function | unknown function | 1 | 41774 | 42160 |
| ATW60795.1 | MG099939_p25 | hypothetical protein | phrog_4511 | unknown function | unknown function | 1 | 20565 | 20864 |
| ATW60871.1 | MG099939_p101 | hypothetical protein | phrog_6439 | unknown function | unknown function | 1 | 53776 | 53982 |
| ATW60843.1 | MG099939_p73 | exonuclease | phrog_149 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 42342 | 43160 |
| ATW60808.1 | MG099939_p38 | HTH DNA binding protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 28513 | 28707 |
| ATW60797.1 | MG099939_p27 | hypothetical protein | phrog_3798 | unknown function | unknown function | 1 | 21061 | 21501 |
| ATW60867.1 | MG099939_p97 | HTH DNA binding domain protein | phrog_908 | unknown function | unknown function | 1 | 52077 | 52805 |
| ATW60830.1 | MG099939_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38681 | 38797 |
| ATW60800.1 | MG099939_p30 | hypothetical protein | phrog_2235 | minor tail protein | tail | 1 | 23156 | 23521 |
| ATW60850.1 | MG099939_p80 | hypothetical protein | phrog_24727 | unknown function | unknown function | 1 | 45237 | 45578 |
| ATW60866.1 | MG099939_p96 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51490 | 52080 |
| ATW60839.1 | MG099939_p69 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41041 | 41157 |
| ATW60783.1 | MG099939_p13 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7514 | 8086 |
| ATW60812.1 | MG099939_p42 | hypothetical protein | phrog_5392 | unknown function | unknown function | -1 | 29441 | 29776 |
| ATW60818.1 | MG099939_p48 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31262 | 31546 |
| ATW60856.1 | MG099939_p86 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47569 | 47898 |
| ATW60861.1 | MG099939_p91 | hypothetical protein | phrog_29686 | unknown function | unknown function | 1 | 49611 | 49940 |
| ATW60801.1 | MG099939_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23518 | 23880 |
| ATW60853.1 | MG099939_p83 | hypothetical protein | phrog_7793 | unknown function | unknown function | 1 | 46733 | 46858 |
| ATW60785.1 | MG099939_p16 | tail assembly chaperone | phrog_8595 | tail assembly chaperone | tail | 1 | 8335 | 8613 |
| ATW60854.1 | MG099939_p84 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46855 | 47151 |
| ATW60804.1 | MG099939_p34 | minor tail protein | phrog_7114 | minor tail protein | tail | 1 | 24366 | 25889 |
| ATW60844.1 | MG099939_p74 | hypothetical protein | phrog_11517 | unknown function | unknown function | 1 | 43163 | 43717 |
| ATW60829.1 | MG099939_p59 | hypothetical protein | phrog_4285 | transposase | integration and excision | 1 | 37414 | 38688 |
| ATW60774.1 | MG099939_p4 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2191 | 3627 |
| ATW60796.1 | MG099939_p26 | hypothetical protein | phrog_6071 | unknown function | unknown function | 1 | 20861 | 21064 |
| ATW60863.1 | MG099939_p93 | hypothetical protein | phrog_1667 | unknown function | unknown function | 1 | 50252 | 50641 |
| ATW60833.1 | MG099939_p63 | hypothetical protein | phrog_1840 | excisionase | integration and excision | 1 | 39358 | 39648 |
| ATW60847.1 | MG099939_p77 | hypothetical protein | phrog_23378 | unknown function | unknown function | 1 | 44288 | 44659 |
| ATW60811.1 | MG099939_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29243 | 29386 |
| ATW60802.1 | MG099939_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23873 | 24019 |
| ATW60814.1 | MG099939_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30178 | 30330 |
| ATW60870.1 | MG099939_p100 | hypothetical protein | phrog_24399 | unknown function | unknown function | 1 | 53548 | 53763 |
| ATW60798.1 | MG099939_p28 | lysin B | phrog_102 | endolysin | lysis | 1 | 21498 | 22121 |
| ATW60872.1 | MG099939_p102 | HNH endonuclease domain protein | phrog_1271 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 54067 | 54810 |
| ATW60842.1 | MG099939_p72 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42136 | 42345 |
| ATW60836.1 | MG099939_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40285 | 40518 |
| ATW60773.1 | MG099939_p3 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 673 | 2190 |
| ATW60782.1 | MG099939_p12 | head to tail connector | phrog_123 | tail terminator | connector | 1 | 7041 | 7451 |
| ATW60778.1 | MG099939_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5855 | 6010 |
| ATW60819.1 | MG099939_p49 | hydrolase | singleton | unknown function | unknown function | 1 | 31546 | 31782 |
| ATW60780.1 | MG099939_p10 | head to tail connector | phrog_763 | head-tail adaptor | connector | 1 | 6480 | 6827 |
| ATW60849.1 | MG099939_p79 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44974 | 45240 |
| ATW60851.1 | MG099939_p81 | hypothetical protein | phrog_33312 | unknown function | unknown function | 1 | 45571 | 46362 |
| ATW60793.1 | MG099939_p23 | lysin A, glycosyl hydrolase domain | phrog_3084 | endolysin | lysis | 1 | 19217 | 20194 |
| ATW60803.1 | MG099939_p33 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 24021 | 24365 |
| ATW60781.1 | MG099939_p11 | head to tail connector | phrog_387 | neck protein | connector | 1 | 6824 | 7048 |
| ATW60816.1 | MG099939_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30492 | 30647 |
| ATW60840.1 | MG099939_p70 | WhiB-like regulatory protein | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 41154 | 41777 |
| ATW60794.1 | MG099939_p24 | holin | phrog_565 | holin | lysis | 1 | 20197 | 20568 |
| ATW60845.1 | MG099939_p75 | hypothetical protein | phrog_13001 | unknown function | unknown function | 1 | 43714 | 43977 |
| ATW60865.1 | MG099939_p95 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51302 | 51493 |
| ATW60860.1 | MG099939_p90 | resolvase | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 49249 | 49614 |
| ATW60823.1 | MG099939_p53 | petallopeptidase domain protein | phrog_87 | metallo-protease | other | -1 | 33820 | 34239 |
| ATW60832.1 | MG099939_p62 | hypothetical protein | phrog_7723 | unknown function | unknown function | 1 | 39104 | 39361 |
| ATW60822.1 | MG099939_p52 | HTH DNA binding protein | phrog_5316 | unknown function | unknown function | -1 | 33614 | 33823 |
| ATW60862.1 | MG099939_p92 | hypothetical protein | phrog_27870 | unknown function | unknown function | 1 | 50050 | 50259 |
| ATW60810.1 | MG099939_p40 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28972 | 29163 |
| ATW60869.1 | MG099939_p99 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53251 | 53433 |
| ATW60784.1 | MG099939_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8083 | 8229 |
| ATW60806.1 | MG099939_p36 | hypothetical protein | phrog_6153 | unknown function | unknown function | -1 | 28131 | 28355 |
| ATW60828.1 | MG099939_p58 | hypothetical protein | phrog_4604 | unknown function | unknown function | 1 | 36926 | 37417 |
| ATW60787.1 | MG099939_p17 | hypothetical protein | phrog_12638 | unknown function | unknown function | -1 | 9018 | 9812 |
| ATW60813.1 | MG099939_p43 | HTH DNA binding domain protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 29876 | 30163 |
| ATW60827.1 | MG099939_p57 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36215 | 36790 |
| ATW60848.1 | MG099939_p78 | hypothetical protein | phrog_780 | unknown function | unknown function | 1 | 44652 | 44984 |
| ATW60838.1 | MG099939_p68 | hypothetical protein | phrog_2857 | tail fiber protein | tail | 1 | 40745 | 41044 |
| ATW60831.1 | MG099939_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38790 | 39107 |
| ATW60821.1 | MG099939_p51 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 32830 | 33462 |
| ATW60857.1 | MG099939_p87 | ATPase | singleton | unknown function | unknown function | 1 | 47895 | 48110 |
| ATW60824.1 | MG099939_p54 | immunity repressor | phrog_19579 | transcriptional regulator | transcription regulation | -1 | 34299 | 35027 |
| ATW60779.1 | MG099939_p9 | head to tail connector | phrog_1290 | head-tail adaptor | connector | 1 | 6026 | 6490 |
| ATW60859.1 | MG099939_p89 | hypothetical protein | phrog_37378 | unknown function | unknown function | 1 | 48908 | 49252 |
| ATW60826.1 | MG099939_p56 | antirepressor-like protein | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 35508 | 36218 |
| ATW60864.1 | MG099939_p94 | hypothetical protein | phrog_14446 | unknown function | unknown function | 1 | 50856 | 51305 |
| ATW60825.1 | MG099939_p55 | Cro protein | phrog_3642 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 35269 | 35508 |
| ATW60815.1 | MG099939_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30323 | 30499 |
| ATW60817.1 | MG099939_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30647 | 30814 |
| ATW60855.1 | MG099939_p85 | hypothetical protein | phrog_2164 | unknown function | unknown function | 1 | 47138 | 47569 |
| ATW60807.1 | MG099939_p37 | hypothetical protein | phrog_24196 | unknown function | unknown function | 1 | 28409 | 28489 |
| ATW60809.1 | MG099939_p39 | hypothetical protein | phrog_34830 | unknown function | unknown function | -1 | 28736 | 28906 |
| ATW60792.1 | MG099939_p22 | lysin A, peptidase M15 domain | phrog_1512 | endolysin | lysis | 1 | 18682 | 19215 |
| ATW60820.1 | MG099939_p50 | integrase | phrog_1 | integrase | integration and excision | 1 | 31782 | 32852 |
| ATW60789.1 | MG099939_p19 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 15508 | 16431 |
| ATW60788.1 | MG099939_p18 | tape measure protein | phrog_4197 | tail length tape measure protein | tail | 1 | 9881 | 15508 |