| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG099943 |
Definition |
Mycobacterium phage Familton, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Corndogvirus; unclassified Corndogvirus. |
DB of origin |
NUCCORE |
Length |
71807 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
129 |
%GC |
65.43 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATW60548.1 | MG099943_p66 | hypothetical protein | phrog_12052 | unknown function | unknown function | 1 | 42034 | 42153 |
| ATW60490.1 | MG099943_p8 | hypothetical protein | phrog_11562 | unknown function | unknown function | -1 | 2144 | 2338 |
| ATW60500.1 | MG099943_p18 | hypothetical protein | phrog_11308 | unknown function | unknown function | 1 | 7071 | 7298 |
| ATW60522.1 | MG099943_p40 | major capsid protein | phrog_2263 | major head protein | head and packaging | 1 | 20093 | 21325 |
| ATW60520.1 | MG099943_p38 | capsid maturation protease | phrog_80 | head maturation protease | head and packaging | 1 | 19142 | 19807 |
| ATW60510.1 | MG099943_p28 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 11975 | 12328 |
| ATW60541.1 | MG099943_p59 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 36102 | 38612 |
| ATW60560.1 | MG099943_p78 | hypothetical protein | phrog_10893 | unknown function | unknown function | -1 | 48070 | 48501 |
| ATW60509.1 | MG099943_p27 | hypothetical protein | phrog_21173 | unknown function | unknown function | 1 | 11706 | 11978 |
| ATW60543.1 | MG099943_p61 | minor tail protein | phrog_644 | unknown function | unknown function | 1 | 40107 | 40508 |
| ATW60602.1 | MG099943_p120 | hypothetical protein | phrog_10868 | unknown function | unknown function | -1 | 67955 | 68056 |
| ATW60576.1 | MG099943_p94 | hypothetical protein | phrog_11784 | unknown function | unknown function | -1 | 57577 | 57918 |
| ATW60495.1 | MG099943_p13 | exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 4748 | 5497 |
| ATW60512.1 | MG099943_p30 | hypothetical protein | phrog_1459 | terminase small subunit | head and packaging | 1 | 12824 | 13123 |
| ATW60592.1 | MG099943_p110 | hypothetical protein | phrog_21921 | unknown function | unknown function | -1 | 65197 | 65433 |
| ATW60502.1 | MG099943_p20 | DNA primase/polymerase | phrog_11515 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 7522 | 9885 |
| ATW60504.1 | MG099943_p22 | hypothetical protein | phrog_5892 | unknown function | unknown function | 1 | 10087 | 10281 |
| ATW60593.1 | MG099943_p111 | hypothetical protein | phrog_11340 | unknown function | unknown function | -1 | 65519 | 65842 |
| ATW60605.1 | MG099943_p123 | hypothetical protein | phrog_11310 | unknown function | unknown function | -1 | 68475 | 68882 |
| ATW60521.1 | MG099943_p39 | hypothetical protein | phrog_5492 | unknown function | unknown function | 1 | 19804 | 19941 |
| ATW60583.1 | MG099943_p101 | hypothetical protein | phrog_6237 | unknown function | unknown function | -1 | 61903 | 62337 |
| ATW60544.1 | MG099943_p62 | minor tail protein | phrog_8501 | minor tail protein | tail | 1 | 40512 | 40913 |
| ATW60561.1 | MG099943_p79 | hypothetical protein | phrog_4776 | unknown function | unknown function | -1 | 48498 | 49223 |
| ATW60581.1 | MG099943_p99 | hypothetical protein | phrog_2903 | unknown function | unknown function | -1 | 61190 | 61510 |
| ATW60511.1 | MG099943_p29 | hypothetical protein | phrog_11114 | unknown function | unknown function | 1 | 12325 | 12822 |
| ATW60573.1 | MG099943_p91 | hypothetical protein | phrog_6218 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | -1 | 55135 | 56643 |
| ATW60546.1 | MG099943_p64 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 41160 | 41348 |
| ATW60565.1 | MG099943_p83 | hypothetical protein | phrog_16746 | unknown function | unknown function | -1 | 52144 | 52410 |
| ATW60589.1 | MG099943_p107 | hypothetical protein | phrog_11675 | unknown function | unknown function | -1 | 64079 | 64486 |
| ATW60599.1 | MG099943_p117 | hypothetical protein | phrog_20426 | unknown function | unknown function | -1 | 67345 | 67530 |
| ATW60506.1 | MG099943_p24 | WhiB family transcription factor | phrog_11069 | transcriptional regulator WhiB-like | transcription regulation | -1 | 10702 | 11001 |
| ATW60563.1 | MG099943_p81 | DNA polymerase III sliding clamp beta | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | -1 | 50014 | 51192 |
| ATW60498.1 | MG099943_p16 | hypothetical protein | phrog_10414 | unknown function | unknown function | 1 | 6396 | 6770 |
| ATW60557.1 | MG099943_p75 | hypothetical protein | phrog_5798 | unknown function | unknown function | -1 | 46937 | 47170 |
| ATW60484.1 | MG099943_p2 | hypothetical protein | phrog_10880 | unknown function | unknown function | -1 | 153 | 359 |
| ATW60604.1 | MG099943_p122 | hypothetical protein | phrog_11387 | unknown function | unknown function | -1 | 68250 | 68429 |
| ATW60559.1 | MG099943_p77 | hypothetical protein | phrog_762 | unknown function | unknown function | -1 | 47593 | 48024 |
| ATW60524.1 | MG099943_p42 | head-to-tail connector protein | phrog_442 | head-tail adaptor | connector | 1 | 21583 | 22188 |
| ATW60527.1 | MG099943_p45 | hypothetical protein | phrog_11597 | unknown function | unknown function | 1 | 22713 | 23018 |
| ATW60514.1 | MG099943_p32 | HNH endonuclease | phrog_826 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 14624 | 15094 |
| ATW60487.1 | MG099943_p5 | hypothetical protein | phrog_6910 | unknown function | unknown function | -1 | 822 | 1199 |
| ATW60501.1 | MG099943_p19 | hypothetical protein | phrog_11004 | unknown function | unknown function | 1 | 7295 | 7525 |
| ATW60483.1 | MG099943_p1 | hypothetical protein | singleton | unknown function | unknown function | -1 | 14 | 175 |
| ATW60537.1 | MG099943_p55 | tape measure protein | phrog_2337 | tail length tape measure protein | tail | 1 | 26704 | 31728 |
| ATW60542.1 | MG099943_p60 | D-ala-D-ala carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 38605 | 40095 |
| ATW60515.1 | MG099943_p33 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 15095 | 16324 |
| ATW60607.1 | MG099943_p125 | hypothetical protein | phrog_9101 | unknown function | unknown function | -1 | 69180 | 69320 |
| ATW60574.1 | MG099943_p92 | hypothetical protein | phrog_10921 | unknown function | unknown function | -1 | 56640 | 56978 |
| ATW60555.1 | MG099943_p73 | hypothetical protein | phrog_11086 | unknown function | unknown function | 1 | 46042 | 46482 |
| ATW60594.1 | MG099943_p112 | hypothetical protein | phrog_25334 | unknown function | unknown function | -1 | 65839 | 66048 |
| ATW60493.1 | MG099943_p11 | hypothetical protein | phrog_11799 | unknown function | unknown function | -1 | 3148 | 3978 |
| ATW60554.1 | MG099943_p72 | hypothetical protein | phrog_5552 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 45548 | 46045 |
| ATW60577.1 | MG099943_p95 | hypothetical protein | phrog_11085 | unknown function | unknown function | -1 | 57908 | 58180 |
| ATW60529.1 | MG099943_p47 | head-to-tail connector protein | phrog_813 | head-tail adaptor | connector | 1 | 23381 | 23833 |
| ATW60572.1 | MG099943_p90 | hypothetical protein | phrog_13372 | unknown function | unknown function | -1 | 54683 | 54958 |
| ATW60516.1 | MG099943_p34 | O-methyltransferase | phrog_6608 | methyltransferase | other | 1 | 16321 | 16905 |
| ATW60550.1 | MG099943_p68 | lysin B | phrog_102 | endolysin | lysis | 1 | 43425 | 44465 |
| ATW60568.1 | MG099943_p86 | hypothetical protein | phrog_17118 | unknown function | unknown function | -1 | 52899 | 53216 |
| ATW60497.1 | MG099943_p15 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 5677 | 6372 |
| ATW60494.1 | MG099943_p12 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 4468 | 4755 |
| ATW60596.1 | MG099943_p114 | hypothetical protein | phrog_11047 | unknown function | unknown function | -1 | 66374 | 66628 |
| ATW60533.1 | MG099943_p51 | hypothetical protein | phrog_11719 | unknown function | unknown function | -1 | 25039 | 25230 |
| ATW60562.1 | MG099943_p80 | hypothetical protein | phrog_11268 | unknown function | unknown function | -1 | 49266 | 49898 |
| ATW60486.1 | MG099943_p4 | hypothetical protein | phrog_10119 | unknown function | unknown function | -1 | 679 | 819 |
| ATW60567.1 | MG099943_p85 | hypothetical protein | phrog_11365 | unknown function | unknown function | -1 | 52624 | 52902 |
| ATW60570.1 | MG099943_p88 | dsDNA break-binding protein | phrog_4873 | Ku-like DNA end binding | DNA, RNA and nucleotide metabolism | -1 | 53540 | 54394 |
| ATW60538.1 | MG099943_p56 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 31733 | 33484 |
| ATW60564.1 | MG099943_p82 | hypothetical protein | phrog_200 | lipoprotein | other | -1 | 51182 | 52147 |
| ATW60519.1 | MG099943_p37 | glycosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 18453 | 19073 |
| ATW60540.1 | MG099943_p58 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 35257 | 36105 |
| ATW60518.1 | MG099943_p36 | glycosyltransferase | phrog_1721 | galactosyl transferase | moron, auxiliary metabolic gene and host takeover | 1 | 17764 | 18456 |
| ATW60485.1 | MG099943_p3 | hypothetical protein | phrog_11270 | unknown function | unknown function | -1 | 359 | 676 |
| ATW60609.1 | MG099943_p127 | hypothetical protein | phrog_15054 | unknown function | unknown function | -1 | 69592 | 69822 |
| ATW60545.1 | MG099943_p63 | hypothetical protein | phrog_8357 | unknown function | unknown function | 1 | 40923 | 41147 |
| ATW60549.1 | MG099943_p67 | lysin A | phrog_700 | endolysin | lysis | 1 | 42203 | 43423 |
| ATW60496.1 | MG099943_p14 | hypothetical protein | phrog_11773 | unknown function | unknown function | 1 | 5497 | 5652 |
| ATW60534.1 | MG099943_p52 | helix-turn-helix DNA binding domain protein | phrog_11503 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25227 | 25682 |
| ATW60603.1 | MG099943_p121 | hypothetical protein | phrog_11514 | unknown function | unknown function | -1 | 68053 | 68253 |
| ATW60606.1 | MG099943_p124 | hypothetical protein | phrog_11204 | unknown function | unknown function | -1 | 68896 | 69183 |
| ATW60597.1 | MG099943_p115 | hypothetical protein | phrog_11392 | unknown function | unknown function | -1 | 66625 | 66846 |
| ATW60587.1 | MG099943_p105 | hypothetical protein | phrog_11120 | unknown function | unknown function | -1 | 63346 | 63675 |
| ATW60553.1 | MG099943_p71 | hypothetical protein | phrog_11815 | unknown function | unknown function | 1 | 45081 | 45557 |
| ATW60525.1 | MG099943_p43 | hypothetical protein | phrog_11160 | unknown function | unknown function | 1 | 22202 | 22339 |
| ATW60503.1 | MG099943_p21 | hypothetical protein | phrog_4656 | unknown function | unknown function | 1 | 9878 | 10090 |
| ATW60588.1 | MG099943_p106 | hypothetical protein | phrog_6351 | unknown function | unknown function | -1 | 63672 | 64079 |
| ATW60536.1 | MG099943_p53 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 25753 | 26704 |
| ATW60489.1 | MG099943_p7 | DNA methylase | phrog_363 | DNA methyltransferase | other | -1 | 1557 | 2147 |
| ATW60558.1 | MG099943_p76 | hypothetical protein | phrog_549 | unknown function | unknown function | -1 | 47167 | 47544 |
| ATW60551.1 | MG099943_p69 | holin | phrog_11087 | holin | lysis | 1 | 44478 | 44774 |
| ATW60526.1 | MG099943_p44 | head-to-tail connector protein | phrog_1531 | head closure | connector | 1 | 22342 | 22701 |
| ATW60601.1 | MG099943_p119 | hypothetical protein | phrog_11863 | unknown function | unknown function | -1 | 67803 | 67958 |
| ATW60531.1 | MG099943_p49 | hypothetical protein | phrog_14205 | unknown function | unknown function | -1 | 24774 | 24869 |
| ATW60488.1 | MG099943_p6 | DNA methylase | phrog_1008 | DNA methyltransferase | other | -1 | 1196 | 1765 |
| ATW60491.1 | MG099943_p9 | hypothetical protein | phrog_6074 | unknown function | unknown function | -1 | 2331 | 2669 |
| ATW60492.1 | MG099943_p10 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 2666 | 3151 |
| ATW60539.1 | MG099943_p57 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 33481 | 35217 |
| ATW60582.1 | MG099943_p100 | hypothetical protein | phrog_7960 | unknown function | unknown function | -1 | 61517 | 61906 |
| ATW60566.1 | MG099943_p84 | hypothetical protein | phrog_13187 | unknown function | unknown function | -1 | 52407 | 52583 |
| ATW60552.1 | MG099943_p70 | hypothetical protein | phrog_3888 | unknown function | unknown function | 1 | 44771 | 45070 |
| ATW60523.1 | MG099943_p41 | hypothetical protein | phrog_11246 | unknown function | unknown function | 1 | 21325 | 21573 |
| ATW60505.1 | MG099943_p23 | MPME 1 protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 10327 | 10701 |
| ATW60508.1 | MG099943_p26 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 11477 | 11713 |
| ATW60598.1 | MG099943_p116 | hypothetical protein | phrog_2164 | unknown function | unknown function | -1 | 66833 | 67348 |
| ATW60532.1 | MG099943_p50 | hypothetical protein | phrog_2906 | unknown function | unknown function | -1 | 24866 | 25042 |
| ATW60547.1 | MG099943_p65 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 41348 | 42034 |
| ATW60569.1 | MG099943_p87 | helix-turn-helix DNA binding protein | phrog_2511 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 53213 | 53524 |
| ATW60535.1 | MG099943_p54 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 25753 | 26307 |
| ATW60571.1 | MG099943_p89 | hypothetical protein | phrog_12859 | unknown function | unknown function | -1 | 54448 | 54675 |
| ATW60575.1 | MG099943_p93 | hypothetical protein | phrog_11147 | unknown function | unknown function | -1 | 57022 | 57471 |
| ATW60608.1 | MG099943_p126 | hypothetical protein | phrog_17181 | unknown function | unknown function | -1 | 69317 | 69472 |
| ATW60584.1 | MG099943_p102 | hypothetical protein | phrog_889 | unknown function | unknown function | -1 | 62413 | 62844 |
| ATW60507.1 | MG099943_p25 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 11046 | 11480 |
| ATW60578.1 | MG099943_p96 | hypothetical protein | phrog_11021 | unknown function | unknown function | -1 | 58177 | 58980 |
| ATW60611.1 | MG099943_p129 | hypothetical protein | phrog_11142 | unknown function | unknown function | 1 | 70973 | 71695 |
| ATW60590.1 | MG099943_p108 | helix-turn-helix DNA binding domain protein | phrog_2590 | unknown function | unknown function | -1 | 64527 | 64841 |
| ATW60586.1 | MG099943_p104 | hypothetical protein | phrog_11545 | unknown function | unknown function | -1 | 63174 | 63353 |
| ATW60579.1 | MG099943_p97 | AAA-ATPase | phrog_8638 | unknown function | unknown function | -1 | 59072 | 60772 |
| ATW60610.1 | MG099943_p128 | hypothetical protein | phrog_13622 | unknown function | unknown function | -1 | 69946 | 70512 |
| ATW60595.1 | MG099943_p113 | hypothetical protein | phrog_18163 | unknown function | unknown function | -1 | 66045 | 66377 |
| ATW60585.1 | MG099943_p103 | hypothetical protein | phrog_11313 | unknown function | unknown function | -1 | 62887 | 63177 |
| ATW60513.1 | MG099943_p31 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 13080 | 14594 |
| ATW60530.1 | MG099943_p48 | major tail protein | phrog_476 | major tail protein | tail | 1 | 23862 | 24677 |
| ATW60528.1 | MG099943_p46 | hypothetical protein | phrog_2325 | minor tail protein | tail | 1 | 23002 | 23388 |
| ATW60580.1 | MG099943_p98 | hypothetical protein | phrog_2939 | unknown function | unknown function | -1 | 60903 | 61193 |
| ATW60517.1 | MG099943_p35 | hypothetical protein | phrog_4447 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 16898 | 17767 |
| ATW60499.1 | MG099943_p17 | hypothetical protein | phrog_10983 | unknown function | unknown function | 1 | 6763 | 7074 |
| ATW60591.1 | MG099943_p109 | hypothetical protein | phrog_3207 | unknown function | unknown function | -1 | 64834 | 65103 |
| ATW60600.1 | MG099943_p118 | hypothetical protein | phrog_8253 | unknown function | unknown function | -1 | 67534 | 67806 |
| ATW60556.1 | MG099943_p74 | helix-turn-helix DNA binding protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 46451 | 46858 |