| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG099944 |
Definition |
Mycobacterium phage ForGetIt, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
NUCCORE |
Length |
51050 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
87 |
%GC |
60.57 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATW60398.1 | MG099944_p3 | minor tail protein | phrog_1260 | minor tail protein | tail | 1 | 1453 | 2415 |
| ATW60462.1 | MG099944_p69 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 43288 | 43818 |
| ATW60423.1 | MG099944_p30 | membrane protein | phrog_733 | excisionase | integration and excision | 1 | 25878 | 26297 |
| ATW60458.1 | MG099944_p65 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 41637 | 41888 |
| ATW60457.1 | MG099944_p64 | dsDNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 40788 | 41594 |
| ATW60418.1 | MG099944_p25 | minor tail protein | phrog_981 | minor tail protein | tail | 1 | 21859 | 22161 |
| ATW60463.1 | MG099944_p70 | membrane protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 44082 | 44378 |
| ATW60419.1 | MG099944_p26 | minor tail protein | phrog_404 | minor tail protein | tail | 1 | 22158 | 22478 |
| ATW60449.1 | MG099944_p56 | hypothetical protein | phrog_10096 | unknown function | unknown function | -1 | 39091 | 39315 |
| ATW60466.1 | MG099944_p73 | hypothetical protein | phrog_6322 | unknown function | unknown function | -1 | 44875 | 45027 |
| ATW60435.1 | MG099944_p42 | ribonucleotide reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | -1 | 32358 | 34427 |
| ATW60405.1 | MG099944_p10 | capsid maturation protein | phrog_193 | head maturation protease | head and packaging | 1 | 9213 | 10052 |
| ATW60399.1 | MG099944_p4 | minor tail protein | phrog_1197 | tail protein | tail | 1 | 2412 | 3467 |
| ATW60425.1 | MG099944_p32 | hypothetical protein | phrog_6992 | unknown function | unknown function | -1 | 26903 | 27076 |
| ATW60467.1 | MG099944_p74 | hypothetical protein | phrog_5561 | unknown function | unknown function | -1 | 45040 | 45219 |
| ATW60470.1 | MG099944_p77 | hypothetical protein | phrog_6186 | unknown function | unknown function | -1 | 45780 | 46406 |
| ATW60453.1 | MG099944_p60 | hypothetical protein | phrog_4539 | unknown function | unknown function | -1 | 40070 | 40168 |
| ATW60455.1 | MG099944_p62 | hypothetical protein | phrog_1498 | unknown function | unknown function | -1 | 40241 | 40393 |
| ATW60478.1 | MG099944_p85 | hypothetical protein | phrog_6340 | unknown function | unknown function | -1 | 48900 | 49313 |
| ATW60417.1 | MG099944_p24 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 21402 | 21866 |
| ATW60396.1 | MG099944_p1 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 561 | 860 |
| ATW60432.1 | MG099944_p39 | helix-turn-helix DNA binding domain protein | phrog_517 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 30768 | 31031 |
| ATW60474.1 | MG099944_p81 | ArdA-like antirestriction protein | phrog_2059 | anti-restriction protein | moron, auxiliary metabolic gene and host takeover | -1 | 46961 | 47476 |
| ATW60443.1 | MG099944_p50 | hypothetical protein | phrog_5242 | unknown function | unknown function | -1 | 37188 | 37454 |
| ATW60430.1 | MG099944_p37 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 28527 | 30371 |
| ATW60420.1 | MG099944_p27 | minor tail protein | phrog_2683 | minor tail protein | tail | 1 | 22475 | 23872 |
| ATW60442.1 | MG099944_p49 | hypothetical protein | phrog_4195 | unknown function | unknown function | -1 | 36772 | 37191 |
| ATW60471.1 | MG099944_p78 | hypothetical protein | phrog_1477 | unknown function | unknown function | -1 | 46403 | 46528 |
| ATW60450.1 | MG099944_p57 | hypothetical protein | phrog_4670 | unknown function | unknown function | -1 | 39312 | 39446 |
| ATW60406.1 | MG099944_p11 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 10107 | 10616 |
| ATW60434.1 | MG099944_p41 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 31799 | 32332 |
| ATW60407.1 | MG099944_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 10643 | 11572 |
| ATW60433.1 | MG099944_p40 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 31024 | 31743 |
| ATW60409.1 | MG099944_p14 | head-to-tail connector protein | phrog_2348 | unknown function | unknown function | 1 | 12021 | 12164 |
| ATW60452.1 | MG099944_p59 | hypothetical protein | phrog_13032 | unknown function | unknown function | -1 | 39925 | 40080 |
| ATW60482.1 | MG099944_p19 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 14296 | 15089 |
| ATW60448.1 | MG099944_p55 | hypothetical protein | phrog_6549 | unknown function | unknown function | -1 | 38873 | 39091 |
| ATW60475.1 | MG099944_p82 | hypothetical protein | phrog_5927 | unknown function | unknown function | -1 | 47494 | 47709 |
| ATW60408.1 | MG099944_p13 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 11650 | 12024 |
| ATW60402.1 | MG099944_p7 | lysin B | phrog_102 | endolysin | lysis | 1 | 5199 | 6008 |
| ATW60446.1 | MG099944_p53 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38207 | 38617 |
| ATW60404.1 | MG099944_p9 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 7783 | 9216 |
| ATW60413.1 | MG099944_p18 | major tail protein | phrog_117 | major tail protein | tail | 1 | 13358 | 14185 |
| ATW60428.1 | MG099944_p35 | hypothetical protein | phrog_5282 | unknown function | unknown function | -1 | 27783 | 28067 |
| ATW60472.1 | MG099944_p79 | hypothetical protein | phrog_34907 | unknown function | unknown function | -1 | 46525 | 46788 |
| ATW60421.1 | MG099944_p28 | hypothetical protein | phrog_2235 | minor tail protein | tail | 1 | 23882 | 24166 |
| ATW60481.1 | MG099944_p20 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 14296 | 14676 |
| ATW60422.1 | MG099944_p29 | integrase | phrog_95 | integrase | integration and excision | -1 | 24218 | 25711 |
| ATW60429.1 | MG099944_p36 | hypothetical protein | phrog_2650 | unknown function | unknown function | -1 | 28064 | 28507 |
| ATW60436.1 | MG099944_p43 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 34424 | 34594 |
| ATW60464.1 | MG099944_p71 | hypothetical protein | phrog_1178 | unknown function | unknown function | -1 | 44379 | 44624 |
| ATW60410.1 | MG099944_p15 | head-to-tail connector protein | phrog_320 | head closure Hc1 | connector | 1 | 12161 | 12523 |
| ATW60427.1 | MG099944_p34 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 27332 | 27793 |
| ATW60401.1 | MG099944_p6 | lysin A | phrog_1512 | endolysin | lysis | 1 | 4288 | 5202 |
| ATW60412.1 | MG099944_p17 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 12936 | 13343 |
| ATW60454.1 | MG099944_p61 | hypothetical protein | phrog_6893 | unknown function | unknown function | -1 | 40161 | 40244 |
| ATW60451.1 | MG099944_p58 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39466 | 39924 |
| ATW60414.1 | MG099944_p21 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 15094 | 18435 |
| ATW60403.1 | MG099944_p8 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 6005 | 7783 |
| ATW60477.1 | MG099944_p84 | hypothetical protein | phrog_6093 | unknown function | unknown function | -1 | 48751 | 48897 |
| ATW60411.1 | MG099944_p16 | head-to-tail connector protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 12523 | 12936 |
| ATW60424.1 | MG099944_p31 | deoxycytidylate deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | -1 | 26397 | 26906 |
| ATW60473.1 | MG099944_p80 | hypothetical protein | phrog_2124 | unknown function | unknown function | -1 | 46804 | 46944 |
| ATW60456.1 | MG099944_p63 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | -1 | 40390 | 40779 |
| ATW60445.1 | MG099944_p52 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 37738 | 38397 |
| ATW60469.1 | MG099944_p76 | hypothetical protein | phrog_6649 | unknown function | unknown function | -1 | 45560 | 45769 |
| ATW60480.1 | MG099944_p87 | hypothetical protein | phrog_8568 | unknown function | unknown function | -1 | 50325 | 50498 |
| ATW60438.1 | MG099944_p45 | hypothetical protein | phrog_5897 | unknown function | unknown function | -1 | 34823 | 34918 |
| ATW60468.1 | MG099944_p75 | hypothetical protein | phrog_5476 | unknown function | unknown function | -1 | 45222 | 45563 |
| ATW60439.1 | MG099944_p46 | helix-turn-helix DNA binding domain protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 34918 | 35544 |
| ATW60476.1 | MG099944_p83 | hypothetical protein | phrog_3906 | unknown function | unknown function | -1 | 47826 | 48659 |
| ATW60444.1 | MG099944_p51 | hypothetical protein | phrog_5270 | unknown function | unknown function | -1 | 37451 | 37741 |
| ATW60397.1 | MG099944_p2 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 898 | 1347 |
| ATW60415.1 | MG099944_p22 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18499 | 19512 |
| ATW60459.1 | MG099944_p66 | hypothetical protein | phrog_642 | unknown function | unknown function | -1 | 41863 | 42165 |
| ATW60465.1 | MG099944_p72 | hypothetical protein | phrog_5066 | unknown function | unknown function | -1 | 44621 | 44875 |
| ATW60431.1 | MG099944_p38 | hypothetical protein | phrog_762 | unknown function | unknown function | -1 | 30385 | 30771 |
| ATW60479.1 | MG099944_p86 | hypothetical protein | phrog_1445 | unknown function | unknown function | -1 | 49369 | 49530 |
| ATW60400.1 | MG099944_p5 | hypothetical protein | phrog_356 | minor tail protein | tail | 1 | 3473 | 4114 |
| ATW60440.1 | MG099944_p47 | phosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 35541 | 36311 |
| ATW60447.1 | MG099944_p54 | hypothetical protein | phrog_5993 | unknown function | unknown function | -1 | 38619 | 38876 |
| ATW60441.1 | MG099944_p48 | hypothetical protein | phrog_1167 | phosphofructokinase | other | -1 | 36308 | 36775 |
| ATW60426.1 | MG099944_p33 | hypothetical protein | phrog_542 | unknown function | unknown function | -1 | 27085 | 27243 |
| ATW60437.1 | MG099944_p44 | hypothetical protein | phrog_1454 | unknown function | unknown function | -1 | 34594 | 34830 |
| ATW60460.1 | MG099944_p67 | exonuclease/helicase | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 42169 | 42984 |
| ATW60461.1 | MG099944_p68 | hypothetical protein | phrog_5957 | unknown function | unknown function | -1 | 42981 | 43271 |
| ATW60416.1 | MG099944_p23 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 19589 | 21388 |