| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG099946 |
Definition |
Mycobacterium phage LouisV14, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Liefievirus; unclassified Liefievirus. |
DB of origin |
NUCCORE |
Length |
44145 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
65 |
%GC |
66.57 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATW60267.1 | MG099946_p39 | hypothetical protein | phrog_10116 | unknown function | unknown function | 1 | 33014 | 33196 |
| ATW60234.1 | MG099946_p6 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 6514 | 7056 |
| ATW60276.1 | MG099946_p48 | hypothetical protein | phrog_14897 | unknown function | unknown function | 1 | 37393 | 37785 |
| ATW60252.1 | MG099946_p24 | hypothetical protein | phrog_8923 | unknown function | unknown function | 1 | 23173 | 23355 |
| ATW60293.1 | MG099946_p56 | hypothetical protein | phrog_10006 | unknown function | unknown function | 1 | 40313 | 40471 |
| ATW60230.1 | MG099946_p2 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 455 | 1891 |
| ATW60277.1 | MG099946_p50 | hypothetical protein | phrog_7826 | unknown function | unknown function | 1 | 38159 | 38404 |
| ATW60272.1 | MG099946_p44 | exonuclease | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 34172 | 35257 |
| ATW60288.1 | MG099946_p63 | hypothetical protein | phrog_7328 | unknown function | unknown function | 1 | 43103 | 43345 |
| ATW60233.1 | MG099946_p5 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 6189 | 6395 |
| ATW60262.1 | MG099946_p34 | transposase | phrog_5749 | transposase | integration and excision | 1 | 29604 | 30926 |
| ATW60292.1 | MG099946_p60 | MPME 1 protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 42118 | 42489 |
| ATW60245.1 | MG099946_p17 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 15477 | 16649 |
| ATW60253.1 | MG099946_p25 | hypothetical protein | phrog_9511 | unknown function | unknown function | 1 | 23352 | 23630 |
| ATW60261.1 | MG099946_p33 | immunity repressor | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 28914 | 29324 |
| ATW60280.1 | MG099946_p53 | resolvase | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 39179 | 39769 |
| ATW60287.1 | MG099946_p62 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 42669 | 43004 |
| ATW60232.1 | MG099946_p4 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 3403 | 6192 |
| ATW60235.1 | MG099946_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7103 | 8038 |
| ATW60282.1 | MG099946_p55 | hypothetical protein | phrog_9043 | unknown function | unknown function | 1 | 39873 | 40316 |
| ATW60251.1 | MG099946_p23 | hypothetical protein | phrog_7598 | unknown function | unknown function | 1 | 22850 | 23170 |
| ATW60264.1 | MG099946_p36 | excise | phrog_7506 | recombination directionality factor | integration and excision | 1 | 31739 | 32020 |
| ATW60241.1 | MG099946_p13 | major tail protein | phrog_117 | major tail protein | tail | 1 | 9854 | 10468 |
| ATW60231.1 | MG099946_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1888 | 3402 |
| ATW60281.1 | MG099946_p54 | hypothetical protein | phrog_13172 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 39766 | 39876 |
| ATW60247.1 | MG099946_p19 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 18403 | 18864 |
| ATW60248.1 | MG099946_p20 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 18861 | 19997 |
| ATW60242.1 | MG099946_p15 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 10569 | 11078 |
| ATW60290.1 | MG099946_p65 | hypothetical protein | phrog_3468 | unknown function | unknown function | 1 | 43789 | 44010 |
| ATW60275.1 | MG099946_p47 | hypothetical protein | phrog_17287 | unknown function | unknown function | 1 | 37211 | 37429 |
| ATW60266.1 | MG099946_p38 | membrane protein | phrog_549 | unknown function | unknown function | 1 | 32415 | 33014 |
| ATW60243.1 | MG099946_p14 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 10569 | 11464 |
| ATW60254.1 | MG099946_p26 | hypothetical protein | phrog_8517 | unknown function | unknown function | 1 | 23630 | 23824 |
| ATW60244.1 | MG099946_p16 | tape measure protein | phrog_971 | endolysin | lysis | 1 | 11464 | 15477 |
| ATW60273.1 | MG099946_p45 | ssDNA binding protein | phrog_4171 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 35254 | 36663 |
| ATW60274.1 | MG099946_p46 | hypothetical protein | phrog_7227 | unknown function | unknown function | 1 | 36660 | 37214 |
| ATW60259.1 | MG099946_p31 | membrane protein | phrog_798 | unknown function | unknown function | 1 | 27107 | 27724 |
| ATW60249.1 | MG099946_p21 | minor tail protein | phrog_1736 | minor tail protein | tail | 1 | 20008 | 20442 |
| ATW60265.1 | MG099946_p37 | hypothetical protein | phrog_5081 | unknown function | unknown function | 1 | 32017 | 32415 |
| ATW60237.1 | MG099946_p9 | head-to-tail connector protein | phrog_1290 | head-tail adaptor | connector | 1 | 8314 | 8811 |
| ATW60260.1 | MG099946_p32 | integrase | phrog_1 | integrase | integration and excision | -1 | 27721 | 28917 |
| ATW60278.1 | MG099946_p51 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 38401 | 38745 |
| ATW60285.1 | MG099946_p59 | hypothetical protein | phrog_5436 | unknown function | unknown function | 1 | 41234 | 42031 |
| ATW60268.1 | MG099946_p40 | ASC-1 transciption coactivator | phrog_986 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 33193 | 33543 |
| ATW60238.1 | MG099946_p10 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 8808 | 9167 |
| ATW60270.1 | MG099946_p42 | hypothetical protein | phrog_7392 | unknown function | unknown function | 1 | 33689 | 34039 |
| ATW60286.1 | MG099946_p61 | hypothetical protein | phrog_5505 | unknown function | unknown function | 1 | 42476 | 42637 |
| ATW60271.1 | MG099946_p43 | hypothetical protein | phrog_6734 | unknown function | unknown function | 1 | 34023 | 34175 |
| ATW60258.1 | MG099946_p30 | membrane protein | phrog_1177 | unknown function | unknown function | 1 | 26790 | 27110 |
| ATW60283.1 | MG099946_p57 | hypothetical protein | phrog_7600 | unknown function | unknown function | 1 | 40471 | 40896 |
| ATW60256.1 | MG099946_p28 | lysin B | phrog_102 | endolysin | lysis | 1 | 25201 | 26409 |
| ATW60284.1 | MG099946_p58 | hypothetical protein | phrog_11054 | unknown function | unknown function | 1 | 40953 | 41237 |
| ATW60236.1 | MG099946_p8 | head-to-tail connector protein | phrog_3101 | unknown function | unknown function | 1 | 8075 | 8302 |
| ATW60240.1 | MG099946_p12 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 9414 | 9857 |
| ATW60246.1 | MG099946_p18 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16649 | 18403 |
| ATW60269.1 | MG099946_p41 | membrane protein | phrog_7486 | unknown function | unknown function | 1 | 33540 | 33689 |
| ATW60255.1 | MG099946_p27 | lysin A | phrog_880 | endolysin | lysis | 1 | 23870 | 25201 |
| ATW60229.1 | MG099946_p1 | terminase small subunit | phrog_1459 | terminase small subunit | head and packaging | 1 | 43 | 387 |
| ATW60289.1 | MG099946_p64 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 43369 | 43695 |
| ATW60250.1 | MG099946_p22 | minor tail protein | phrog_7565 | minor tail protein | tail | 1 | 20442 | 22835 |
| ATW60263.1 | MG099946_p35 | resolvase | singleton | unknown function | unknown function | -1 | 30934 | 31686 |
| ATW60291.1 | MG099946_p49 | hypothetical protein | phrog_15494 | unknown function | unknown function | 1 | 37782 | 38171 |
| ATW60239.1 | MG099946_p11 | head-to-tail connector protein | phrog_387 | neck protein | connector | 1 | 9154 | 9417 |
| ATW60257.1 | MG099946_p29 | holin | phrog_7198 | holin | lysis | 1 | 26435 | 26785 |
| ATW60279.1 | MG099946_p52 | hypothetical protein | phrog_7576 | unknown function | unknown function | 1 | 38742 | 39182 |