| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG099951 |
Definition |
Mycobacterium phage Wilkins, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
NUCCORE |
Length |
50907 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
94 |
%GC |
63.93 |
Number of singletons |
2 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATW59798.1 | MG099951_p13 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 9862 | 10743 |
| ATW59820.1 | MG099951_p35 | minor tail protein | phrog_553 | minor tail protein | tail | 1 | 27862 | 28548 |
| ATW59787.1 | MG099951_p2 | hypothetical protein | phrog_14140 | unknown function | unknown function | 1 | 902 | 1093 |
| ATW59823.1 | MG099951_p38 | hypothetical protein | phrog_2387 | nucleotide kinase | other | -1 | 30736 | 31125 |
| ATW59799.1 | MG099951_p14 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 10802 | 11314 |
| ATW59862.1 | MG099951_p77 | membrane protein | phrog_1155 | unknown function | unknown function | -1 | 46041 | 46229 |
| ATW59830.1 | MG099951_p45 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 34258 | 34488 |
| ATW59852.1 | MG099951_p67 | DNA methylase | phrog_111 | DNA methyltransferase | other | -1 | 42014 | 42541 |
| ATW59819.1 | MG099951_p34 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 27653 | 27862 |
| ATW59854.1 | MG099951_p69 | exonuclease/helicase | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 42764 | 43588 |
| ATW59796.1 | MG099951_p11 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 6738 | 8426 |
| ATW59874.1 | MG099951_p89 | hypothetical protein | phrog_2985 | unknown function | unknown function | 1 | 49010 | 49165 |
| ATW59865.1 | MG099951_p80 | hypothetical protein | phrog_18314 | unknown function | unknown function | -1 | 46518 | 46700 |
| ATW59805.1 | MG099951_p20 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 13845 | 14291 |
| ATW59879.1 | MG099951_p94 | hypothetical protein | phrog_13308 | unknown function | unknown function | -1 | 50232 | 50507 |
| ATW59807.1 | MG099951_p23 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15272 | 15643 |
| ATW59833.1 | MG099951_p48 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 35373 | 35555 |
| ATW59869.1 | MG099951_p84 | hypothetical protein | phrog_3414 | unknown function | unknown function | -1 | 47498 | 47782 |
| ATW59803.1 | MG099951_p18 | head-to-tail connector protein | phrog_320 | head closure Hc1 | connector | 1 | 13084 | 13446 |
| ATW59861.1 | MG099951_p76 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 45844 | 46044 |
| ATW59840.1 | MG099951_p55 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38349 | 38864 |
| ATW59876.1 | MG099951_p91 | hypothetical protein | phrog_11620 | unknown function | unknown function | 1 | 49451 | 49591 |
| ATW59873.1 | MG099951_p88 | membrane protein | phrog_2212 | unknown function | unknown function | -1 | 48775 | 48858 |
| ATW59816.1 | MG099951_p31 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 23904 | 25757 |
| ATW59867.1 | MG099951_p82 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 46944 | 47096 |
| ATW59838.1 | MG099951_p53 | hypothetical protein | phrog_1167 | phosphofructokinase | other | -1 | 37419 | 37985 |
| ATW59794.1 | MG099951_p9 | lysin A | phrog_317 | endolysin | lysis | 1 | 4348 | 5760 |
| ATW59793.1 | MG099951_p8 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 4091 | 4348 |
| ATW59853.1 | MG099951_p68 | hypothetical protein | phrog_5961 | unknown function | unknown function | -1 | 42576 | 42734 |
| ATW59818.1 | MG099951_p33 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 27275 | 27643 |
| ATW59860.1 | MG099951_p75 | hypothetical protein | phrog_6510 | unknown function | unknown function | -1 | 45665 | 45847 |
| ATW59878.1 | MG099951_p93 | hypothetical protein | phrog_11177 | unknown function | unknown function | 1 | 49912 | 50124 |
| ATW59797.1 | MG099951_p12 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 8423 | 9865 |
| ATW59815.1 | MG099951_p30 | minor tail protein | phrog_1397 | unknown function | unknown function | 1 | 23579 | 23878 |
| ATW59870.1 | MG099951_p85 | hypothetical protein | phrog_11359 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 47912 | 48085 |
| ATW59786.1 | MG099951_p1 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 598 | 894 |
| ATW59842.1 | MG099951_p57 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 38998 | 39132 |
| ATW59841.1 | MG099951_p56 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 38843 | 39001 |
| ATW59855.1 | MG099951_p70 | membrane protein | phrog_1584 | unknown function | unknown function | -1 | 43581 | 43895 |
| ATW59812.1 | MG099951_p27 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 20952 | 22754 |
| ATW59801.1 | MG099951_p16 | head-to-tail connector protein | phrog_1857 | head-tail connector protein | connector | 1 | 12408 | 12635 |
| ATW59868.1 | MG099951_p83 | hypothetical protein | singleton | unknown function | unknown function | -1 | 47119 | 47268 |
| ATW59863.1 | MG099951_p78 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 46229 | 46396 |
| ATW59789.1 | MG099951_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1611 | 1886 |
| ATW59825.1 | MG099951_p40 | hypothetical protein | phrog_15070 | unknown function | unknown function | -1 | 31484 | 31582 |
| ATW59809.1 | MG099951_p24 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 16077 | 18692 |
| ATW59788.1 | MG099951_p3 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 1130 | 1564 |
| ATW59827.1 | MG099951_p42 | hypothetical protein | phrog_9480 | unknown function | unknown function | -1 | 31743 | 32021 |
| ATW59826.1 | MG099951_p41 | hypothetical protein | phrog_1860 | unknown function | unknown function | -1 | 31651 | 31746 |
| ATW59872.1 | MG099951_p87 | hypothetical protein | phrog_5542 | unknown function | unknown function | -1 | 48416 | 48778 |
| ATW59839.1 | MG099951_p54 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 37982 | 38503 |
| ATW59817.1 | MG099951_p32 | D-ala-D-ala carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 25750 | 27231 |
| ATW59828.1 | MG099951_p43 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 32018 | 32398 |
| ATW59814.1 | MG099951_p29 | minor tail protein | phrog_981 | minor tail protein | tail | 1 | 23235 | 23582 |
| ATW59810.1 | MG099951_p25 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18716 | 20773 |
| ATW59806.1 | MG099951_p21 | major tail protein | phrog_117 | major tail protein | tail | 1 | 14300 | 15151 |
| ATW59849.1 | MG099951_p64 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 41194 | 41487 |
| ATW59858.1 | MG099951_p73 | membrane protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 45103 | 45402 |
| ATW59791.1 | MG099951_p6 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 3108 | 3809 |
| ATW59800.1 | MG099951_p15 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 11325 | 12329 |
| ATW59795.1 | MG099951_p10 | lysin B | phrog_102 | endolysin | lysis | 1 | 5750 | 6718 |
| ATW59821.1 | MG099951_p36 | integrase | phrog_95 | integrase | integration and excision | 1 | 28845 | 30344 |
| ATW59877.1 | MG099951_p92 | hypothetical protein | phrog_13961 | unknown function | unknown function | -1 | 49645 | 49842 |
| ATW59856.1 | MG099951_p71 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 43892 | 44287 |
| ATW59832.1 | MG099951_p47 | hypothetical protein | phrog_2094 | unknown function | unknown function | -1 | 35040 | 35372 |
| ATW59845.1 | MG099951_p60 | hypothetical protein | phrog_3472 | unknown function | unknown function | -1 | 39708 | 39962 |
| ATW59813.1 | MG099951_p28 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 22792 | 23238 |
| ATW59836.1 | MG099951_p51 | metallophosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 36476 | 37243 |
| ATW59848.1 | MG099951_p63 | hypothetical protein | phrog_1705 | unknown function | unknown function | -1 | 41051 | 41197 |
| ATW59831.1 | MG099951_p46 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 34519 | 35010 |
| ATW59871.1 | MG099951_p86 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 48219 | 48419 |
| ATW59811.1 | MG099951_p26 | minor tail protein | phrog_1543 | minor tail protein | tail | 1 | 20770 | 20952 |
| ATW59866.1 | MG099951_p81 | hypothetical protein | phrog_2974 | unknown function | unknown function | -1 | 46697 | 46918 |
| ATW59846.1 | MG099951_p61 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 39959 | 40255 |
| ATW59804.1 | MG099951_p19 | head-to-tail connector protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 13446 | 13841 |
| ATW59790.1 | MG099951_p5 | minor tail protein | phrog_1197 | tail protein | tail | 1 | 2028 | 3098 |
| ATW59824.1 | MG099951_p39 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 31122 | 31484 |
| ATW59835.1 | MG099951_p50 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36336 | 36476 |
| ATW59851.1 | MG099951_p66 | helix-turn-helix DNA binding domain protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 41787 | 41969 |
| ATW59834.1 | MG099951_p49 | helix-turn-helix DNA binding domain protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 35552 | 36343 |
| ATW59859.1 | MG099951_p74 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 45399 | 45668 |
| ATW59864.1 | MG099951_p79 | hypothetical protein | phrog_2093 | unknown function | unknown function | -1 | 46393 | 46521 |
| ATW59808.1 | MG099951_p22 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15272 | 16065 |
| ATW59843.1 | MG099951_p58 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39129 | 39605 |
| ATW59847.1 | MG099951_p62 | dsDNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 40255 | 41064 |
| ATW59857.1 | MG099951_p72 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 44329 | 44841 |
| ATW59792.1 | MG099951_p7 | hypothetical protein | phrog_1718 | tail protein | tail | 1 | 3823 | 4083 |
| ATW59875.1 | MG099951_p90 | membrane protein | phrog_828 | unknown function | unknown function | 1 | 49248 | 49454 |
| ATW59837.1 | MG099951_p52 | hypothetical protein | phrog_1503 | unknown function | unknown function | -1 | 37240 | 37422 |
| ATW59822.1 | MG099951_p37 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 30467 | 30739 |
| ATW59844.1 | MG099951_p59 | membrane protein | phrog_1019 | unknown function | unknown function | -1 | 39592 | 39711 |
| ATW59802.1 | MG099951_p17 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 12635 | 13084 |
| ATW59829.1 | MG099951_p44 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 32395 | 34221 |
| ATW59850.1 | MG099951_p65 | hypothetical protein | phrog_2184 | unknown function | unknown function | -1 | 41484 | 41783 |