Genomic map of Mycobacterium phage Youngblood (MG099953)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG099953
Definition
Mycobacterium phage Youngblood, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus.
DB of origin
NUCCORE
Length
75896
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
148
%GC
62.94
Number of singletons
1
Number of paralogs
5

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATW59641.1 MG099953_p93 hypothetical protein phrog_2844 unknown function unknown function 1 55297 55419
ATW59635.1 MG099953_p87 hypothetical protein phrog_2747 unknown function unknown function 1 52624 52845
ATW59581.1 MG099953_p33 holin phrog_526 holin lysis 1 31307 31690
ATW59661.1 MG099953_p113 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 64179 64553
ATW59610.1 MG099953_p62 hypothetical protein phrog_2800 unknown function unknown function 1 42513 42791
ATW59578.1 MG099953_p30 helix-turn-helix DNA binding domain protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 29125 29310
ATW59557.1 MG099953_p9 hypothetical protein phrog_2845 unknown function unknown function 1 4570 4791
ATW59591.1 MG099953_p43 hypothetical protein phrog_722 unknown function unknown function -1 35174 35542
ATW59614.1 MG099953_p66 hypothetical protein phrog_2147 unknown function unknown function 1 43774 44073
ATW59554.1 MG099953_p6 hypothetical protein phrog_4101 unknown function unknown function -1 1309 1548
ATW59655.1 MG099953_p107 hypothetical protein phrog_2757 unknown function unknown function 1 62281 62571
ATW59695.1 MG099953_p147 hypothetical protein phrog_2762 unknown function unknown function 1 75131 75325
ATW59621.1 MG099953_p73 hypothetical protein phrog_2750 unknown function unknown function 1 47094 47405
ATW59631.1 MG099953_p83 hypothetical protein phrog_572 unknown function unknown function 1 50617 50952
ATW59583.1 MG099953_p35 lysin B phrog_102 endolysin lysis 1 32018 32875
ATW59626.1 MG099953_p78 hypothetical protein phrog_2793 unknown function unknown function 1 48790 49023
ATW59630.1 MG099953_p82 hypothetical protein phrog_1882 unknown function unknown function 1 49970 50620
ATW59654.1 MG099953_p106 hypothetical protein phrog_2785 unknown function unknown function 1 61925 62284
ATW59694.1 MG099953_p146 hypothetical protein phrog_2904 unknown function unknown function 1 74682 75029
ATW59605.1 MG099953_p57 immunity repressor phrog_2745 transcriptional repressor transcription regulation -1 40637 40984
ATW59658.1 MG099953_p110 hypothetical protein phrog_15491 unknown function unknown function 1 63203 63319
ATW59680.1 MG099953_p132 hypothetical protein phrog_2942 unknown function unknown function -1 70265 70525
ATW59589.1 MG099953_p41 hypothetical protein phrog_647 unknown function unknown function -1 34555 34902
ATW59628.1 MG099953_p80 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 49430 49747
ATW59565.1 MG099953_p17 head-to-tail connector protein phrog_813 head-tail adaptor connector 1 10582 10986
ATW59684.1 MG099953_p136 hypothetical protein phrog_4006 unknown function unknown function -1 71694 72218
ATW59608.1 MG099953_p60 pentapeptide repeat protein phrog_923 unknown function unknown function 1 41523 42368
ATW59617.1 MG099953_p69 hypothetical protein phrog_762 unknown function unknown function 1 44685 45014
ATW59598.1 MG099953_p50 hypothetical protein phrog_2702 unknown function unknown function -1 36917 37132
ATW59568.1 MG099953_p21 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 12641 13102
ATW59650.1 MG099953_p102 DNA methylase phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 59838 60401
ATW59629.1 MG099953_p81 hypothetical protein phrog_1673 unknown function unknown function 1 49737 49973
ATW59573.1 MG099953_p25 minor tail protein phrog_732 minor tail protein tail 1 21614 22435
ATW59604.1 MG099953_p56 hypothetical protein phrog_950 unknown function unknown function -1 39769 40542
ATW59667.1 MG099953_p119 hypothetical protein phrog_2755 unknown function unknown function 1 67161 67334
ATW59682.1 MG099953_p134 hypothetical protein phrog_1915 unknown function unknown function -1 70887 71345
ATW59637.1 MG099953_p89 holliday-junction resolvase phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 53200 53562
ATW59644.1 MG099953_p96 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 57596 57856
ATW59663.1 MG099953_p115 DNA polymerase III subunit phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 65046 65831
ATW59572.1 MG099953_p24 minor tail protein phrog_110 minor tail protein tail 1 19998 21593
ATW59662.1 MG099953_p114 hypothetical protein phrog_2252 endolysin; inhibits RNA polymerase lysis 1 64556 65035
ATW59590.1 MG099953_p42 hypothetical protein phrog_3472 unknown function unknown function -1 34923 35177
ATW59659.1 MG099953_p111 hypothetical protein phrog_2846 unknown function unknown function 1 63684 63908
ATW59562.1 MG099953_p14 head-to-tail connector protein phrog_442 head-tail adaptor connector 1 9311 9877
ATW59549.1 MG099953_p1 hypothetical protein phrog_3456 unknown function unknown function 1 34 270
ATW59600.1 MG099953_p52 hypothetical protein phrog_2759 unknown function unknown function -1 37297 37692
ATW59651.1 MG099953_p103 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 60394 60834
ATW59648.1 MG099953_p100 hypothetical protein phrog_2788 unknown function unknown function 1 58929 59264
ATW59687.1 MG099953_p139 hypothetical protein phrog_2883 unknown function unknown function -1 72611 73147
ATW59574.1 MG099953_p26 minor tail protein phrog_346 minor tail protein tail 1 22452 24848
ATW59671.1 MG099953_p123 hypothetical protein phrog_2764 unknown function unknown function 1 68181 68348
ATW59552.1 MG099953_p4 hypothetical protein phrog_2775 unknown function unknown function 1 601 783
ATW59579.1 MG099953_p31 hypothetical protein phrog_411 unknown function unknown function 1 29443 29727
ATW59580.1 MG099953_p32 lysin A phrog_317 endolysin lysis 1 29801 31303
ATW59570.1 MG099953_p22 tape measure protein phrog_2723 tail length tape measure protein tail 1 13505 18235
ATW59676.1 MG099953_p128 hypothetical protein phrog_3016 unknown function unknown function 1 68984 69118
ATW59673.1 MG099953_p125 hypothetical protein phrog_2296 unknown function unknown function 1 68529 68666
ATW59594.1 MG099953_p46 hypothetical protein phrog_6127 unknown function unknown function -1 36241 36354
ATW59672.1 MG099953_p124 hypothetical protein phrog_2823 unknown function unknown function 1 68332 68532
ATW59674.1 MG099953_p126 hypothetical protein phrog_2925 unknown function unknown function 1 68663 68842
ATW59627.1 MG099953_p79 hypothetical protein phrog_289 GTP-binding domain other 1 49020 49433
ATW59592.1 MG099953_p44 hypothetical protein phrog_1573 DNA methyltransferase other -1 35539 35976
ATW59686.1 MG099953_p138 hypothetical protein phrog_2287 unknown function unknown function -1 72359 72595
ATW59571.1 MG099953_p23 minor tail protein phrog_106 minor tail protein tail 1 18265 19926
ATW59597.1 MG099953_p49 hypothetical protein phrog_2893 unknown function unknown function -1 36688 36858
ATW59649.1 MG099953_p101 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 59297 59797
ATW59599.1 MG099953_p51 hypothetical protein phrog_2815 unknown function unknown function -1 37151 37297
ATW59678.1 MG099953_p130 helix-turn-helix DNA binding domain protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 69497 69760
ATW59576.1 MG099953_p28 minor tail protein phrog_553 minor tail protein tail 1 27686 28630
ATW59566.1 MG099953_p18 major tail protein phrog_476 major tail protein tail 1 11013 11987
ATW59677.1 MG099953_p129 hypothetical protein phrog_6448 unknown function unknown function 1 69120 69233
ATW59575.1 MG099953_p27 D-ala-D-ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 24845 27685
ATW59643.1 MG099953_p95 helix-turn-helix DNA binding protein phrog_1590 unknown function unknown function 1 56778 57599
ATW59685.1 MG099953_p137 hypothetical protein phrog_3730 unknown function unknown function -1 72244 72369
ATW59692.1 MG099953_p144 hypothetical protein phrog_5970 unknown function unknown function -1 74166 74429
ATW59561.1 MG099953_p13 head-to-tail connector protein phrog_2796 head-tail connector protein connector 1 9132 9311
ATW59606.1 MG099953_p58 hypothetical protein phrog_3071 unknown function unknown function 1 41294 41392
ATW59690.1 MG099953_p142 hypothetical protein phrog_2772 unknown function unknown function -1 73709 73945
ATW59675.1 MG099953_p127 hypothetical protein phrog_2897 unknown function unknown function 1 68842 68973
ATW59633.1 MG099953_p85 hypothetical protein phrog_1091 unknown function unknown function 1 52204 52392
ATW59613.1 MG099953_p65 hypothetical protein phrog_3463 unknown function unknown function 1 43659 43766
ATW59660.1 MG099953_p112 hypothetical protein phrog_1042 unknown function unknown function 1 63905 64168
ATW59551.1 MG099953_p3 hypothetical protein phrog_2829 unknown function unknown function 1 446 604
ATW59588.1 MG099953_p40 hypothetical protein singleton unknown function unknown function -1 34394 34558
ATW59669.1 MG099953_p121 hypothetical protein phrog_3062 unknown function unknown function 1 67520 67774
ATW59642.1 MG099953_p94 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 55416 56741
ATW59693.1 MG099953_p145 hypothetical protein phrog_5130 unknown function unknown function -1 74426 74638
ATW59683.1 MG099953_p135 hypothetical protein phrog_1587 unknown function unknown function -1 71360 71689
ATW59550.1 MG099953_p2 hypothetical protein phrog_4110 unknown function unknown function 1 267 449
ATW59652.1 MG099953_p104 protease phrog_94 head maturation protease head and packaging 1 60923 61729
ATW59622.1 MG099953_p74 hypothetical protein phrog_2771 unknown function unknown function 1 47405 47875
ATW59585.1 MG099953_p37 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 33295 33540
ATW59689.1 MG099953_p141 hypothetical protein phrog_1438 unknown function unknown function -1 73539 73697
ATW59639.1 MG099953_p91 polynucleotide kinase phrog_505 polynucleotide kinase other 1 53908 54849
ATW59563.1 MG099953_p15 head-to-tail connector protein phrog_1531 head closure connector 1 9892 10227
ATW59595.1 MG099953_p47 hypothetical protein phrog_1155 unknown function unknown function -1 36351 36524
ATW59601.1 MG099953_p53 membrane domain protein phrog_2847 unknown function unknown function -1 37979 38281
ATW59558.1 MG099953_p10 portal protein phrog_12 portal protein head and packaging 1 4778 6334
ATW59555.1 MG099953_p7 hypothetical protein phrog_2202 unknown function unknown function -1 1548 1856
ATW59656.1 MG099953_p108 helix-turn-helix DNA binding protein phrog_1969 unknown function unknown function 1 62576 62887
ATW59584.1 MG099953_p36 hypothetical protein phrog_726 unknown function unknown function 1 32872 33288
ATW59603.1 MG099953_p55 hypothetical protein phrog_2842 unknown function unknown function 1 39552 39791
ATW59679.1 MG099953_p131 hypothetical protein phrog_2579 ParB C-terminal domain DNA, RNA and nucleotide metabolism -1 69757 70146
ATW59691.1 MG099953_p143 hypothetical protein phrog_2795 unknown function unknown function -1 73951 74148
ATW59668.1 MG099953_p120 hypothetical protein phrog_2279 unknown function unknown function 1 67327 67539
ATW59618.1 MG099953_p70 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 45011 45979
ATW59587.1 MG099953_p39 hypothetical protein phrog_4396 unknown function unknown function -1 34256 34384
ATW59593.1 MG099953_p45 hypothetical protein phrog_722 unknown function unknown function -1 35973 36248
ATW59696.1 MG099953_p148 HNH endonuclease phrog_589 HNH endonuclease DNA, RNA and nucleotide metabolism 1 75315 75662
ATW59688.1 MG099953_p140 hypothetical protein phrog_3174 unknown function unknown function -1 73151 73534
ATW59623.1 MG099953_p75 hypothetical protein phrog_1389 unknown function unknown function 1 47875 48243
ATW59569.1 MG099953_p20 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 12641 13512
ATW59607.1 MG099953_p59 hypothetical protein phrog_2852 unknown function unknown function 1 41389 41526
ATW59666.1 MG099953_p118 hypothetical protein phrog_2965 unknown function unknown function 1 67037 67174
ATW59616.1 MG099953_p68 hypothetical protein phrog_301 secreted protein other 1 44356 44688
ATW59596.1 MG099953_p48 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 36524 36691
ATW59611.1 MG099953_p63 hypothetical protein phrog_4633 unknown function unknown function 1 43100 43288
ATW59681.1 MG099953_p133 hypothetical protein phrog_3034 unknown function unknown function -1 70522 70890
ATW59664.1 MG099953_p116 hypothetical protein phrog_1941 unknown function unknown function 1 65828 66070
ATW59624.1 MG099953_p76 hypothetical protein phrog_572 unknown function unknown function 1 48246 48614
ATW59657.1 MG099953_p109 HNH endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 62940 63230
ATW59609.1 MG099953_p61 hypothetical protein phrog_2463 unknown function unknown function 1 42370 42516
ATW59619.1 MG099953_p71 hypothetical protein phrog_572 unknown function unknown function 1 45976 46386
ATW59638.1 MG099953_p90 hypothetical protein phrog_2894 unknown function unknown function 1 53559 53753
ATW59586.1 MG099953_p38 DNA bridging protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 33737 34123
ATW59634.1 MG099953_p86 WhiB family transcription factor phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 52374 52649
ATW59670.1 MG099953_p122 hypothetical protein phrog_2174 unknown function unknown function 1 67723 68184
ATW59567.1 MG099953_p19 hypothetical protein phrog_5711 head fiber protein head and packaging 1 12047 12520
ATW59602.1 MG099953_p54 integrase phrog_1 integrase integration and excision 1 38532 39413
ATW59582.1 MG099953_p34 hypothetical protein phrog_2424 unknown function unknown function 1 31683 32021
ATW59556.1 MG099953_p8 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1895 4558
ATW59559.1 MG099953_p11 capsid maturation protease phrog_2753 head maturation protease head and packaging 1 6337 7428
ATW59612.1 MG099953_p64 hypothetical protein phrog_2744 unknown function unknown function 1 43335 43640
ATW59665.1 MG099953_p117 DNA recombinase phrog_97 UvsX-like recombinase other 1 66078 67040
ATW59647.1 MG099953_p99 hypothetical protein phrog_889 unknown function unknown function 1 58484 58927
ATW59564.1 MG099953_p16 head-to-tail connector protein phrog_2805 minor tail protein tail 1 10224 10604
ATW59560.1 MG099953_p12 major capsid protein phrog_10 major head protein head and packaging 1 7516 9009
ATW59640.1 MG099953_p92 hypothetical protein phrog_2495 unknown function unknown function 1 54956 55324
ATW59553.1 MG099953_p5 terminase small subunit phrog_83 terminase small subunit head and packaging 1 776 1237
ATW59632.1 MG099953_p84 dsDNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 50945 52207
ATW59653.1 MG099953_p105 hypothetical protein phrog_1454 unknown function unknown function 1 61731 61928
ATW59645.1 MG099953_p97 hypothetical protein phrog_2853 unknown function unknown function 1 57873 58031
ATW59615.1 MG099953_p67 hypothetical protein phrog_2221 unknown function unknown function 1 44039 44167
ATW59625.1 MG099953_p77 hypothetical protein phrog_1622 unknown function unknown function 1 48614 48793
ATW59646.1 MG099953_p98 hypothetical protein phrog_889 unknown function unknown function 1 58028 58480
ATW59577.1 MG099953_p29 hypothetical protein phrog_644 unknown function unknown function 1 28710 29138
ATW59620.1 MG099953_p72 hypothetical protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 46379 47101
ATW59636.1 MG099953_p88 hypothetical protein phrog_3836 unknown function unknown function 1 52838 53203