Genomic map of Stenotrophomonas phage vB_SmaS_DLP_5 (MG189906)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG189906
Definition
Stenotrophomonas phage vB_SmaS_DLP_5, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Delepquintavirus; Stenotrophomonas virus DLP5.
DB of origin
NUCCORE
Length
96542
Host Name
Stenotrophomonas maltophilia
Host domain
Bacteria
Is prophage?
undef
Number of proteins
149
%GC
58.36
Number of singletons
90
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATS92309.1 MG189906_p74 SPFH domain-containing protein phrog_200 lipoprotein other 1 52692 53489
ATS92334.1 MG189906_p30 hypothetical protein singleton unknown function unknown function 1 26661 27149
ATS92332.1 MG189906_p64 RuvC phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 46571 47068
ATS92388.1 MG189906_p86 hypothetical protein singleton unknown function unknown function 1 59527 59781
ATS92401.1 MG189906_p45 hypothetical protein singleton unknown function unknown function 1 33098 33286
ATS92396.1 MG189906_p84 hypothetical protein singleton unknown function unknown function 1 58941 59162
ATS92390.1 MG189906_p111 hypothetical protein singleton unknown function unknown function 1 74696 74938
ATS92286.1 MG189906_p119 hypothetical protein singleton unknown function unknown function 1 76961 78133
ATS92275.1 MG189906_p1 portal protein phrog_12 portal protein head and packaging 1 78 1892
ATS92300.1 MG189906_p46 hypothetical protein singleton unknown function unknown function 1 33347 34273
ATS92402.1 MG189906_p127 hypothetical protein phrog_11659 unknown function unknown function 1 80981 81163
ATS92347.1 MG189906_p10 tail protein phrog_26 tail completion or Neck1 protein connector 1 8127 8549
ATS92351.1 MG189906_p110 DUF3310 containing protein phrog_11324 nucleotide kinase other 1 74224 74634
ATS92375.1 MG189906_p133 hypothetical protein singleton unknown function unknown function 1 83356 83649
ATS92412.1 MG189906_p117 hypothetical protein singleton unknown function unknown function 1 76419 76571
ATS92414.1 MG189906_p71 hypothetical protein singleton unknown function unknown function -1 50616 50741
ATS92394.1 MG189906_p75 hypothetical protein singleton unknown function unknown function 1 53585 53812
ATS92410.1 MG189906_p37 hypothetical protein singleton unknown function unknown function 1 29262 29426
ATS92365.1 MG189906_p77 hypothetical protein phrog_36680 unknown function unknown function 1 54246 54596
ATS92364.1 MG189906_p120 hypothetical protein phrog_38499 unknown function unknown function 1 78133 78483
ATS92408.1 MG189906_p33 hypothetical protein singleton unknown function unknown function 1 28163 28333
ATS92374.1 MG189906_p40 hypothetical protein singleton unknown function unknown function 1 30170 30472
ATS92329.1 MG189906_p52 hypothetical protein singleton unknown function unknown function 1 37496 38056
ATS92377.1 MG189906_p22 hypothetical protein phrog_1180 tail assembly chaperone tail 1 20016 20303
ATS92304.1 MG189906_p63 hypothetical protein phrog_2506 exonuclease DNA, RNA and nucleotide metabolism 1 45690 46574
ATS92288.1 MG189906_p78 hypothetical protein singleton unknown function unknown function 1 54589 55743
ATS92352.1 MG189906_p32 hypothetical protein singleton unknown function unknown function 1 27708 28112
ATS92313.1 MG189906_p72 hypothetical protein singleton unknown function unknown function 1 51339 52109
ATS92340.1 MG189906_p121 hypothetical protein phrog_26039 unknown function unknown function 1 78509 78970
ATS92418.1 MG189906_p113 hypothetical protein singleton unknown function unknown function 1 75401 75499
ATS92341.1 MG189906_p43 phosphoglycerate kinase singleton unknown function unknown function 1 32407 32859
ATS92319.1 MG189906_p92 hypothetical protein singleton unknown function unknown function 1 61278 61922
ATS92295.1 MG189906_p19 hypothetical protein phrog_687 structural protein head and packaging 1 16548 17525
ATS92330.1 MG189906_p31 lysozyme phrog_315 endolysin lysis 1 27146 27706
ATS92283.1 MG189906_p5 hypothetical protein singleton unknown function unknown function 1 4125 5351
ATS92272.1 MG189906_p146 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 92618 94903
ATS92315.1 MG189906_p8 ribonuclease E singleton unknown function unknown function 1 6741 7493
ATS92391.1 MG189906_p44 hypothetical protein singleton unknown function unknown function 1 32859 33101
ATS92337.1 MG189906_p128 DUF1643 containing protein phrog_3230 unknown function unknown function 1 81163 81636
ATS92398.1 MG189906_p39 hypothetical protein singleton unknown function unknown function 1 29958 30167
ATS92314.1 MG189906_p14 hypothetical protein phrog_807 major tail protein with Ig-like domain tail 1 9746 10501
ATS92358.1 MG189906_p116 hypothetical protein singleton unknown function unknown function 1 76054 76428
ATS92298.1 MG189906_p99 WcaG phrog_540 nucleotide-sugar epimerase DNA, RNA and nucleotide metabolism 1 64875 65816
ATS92343.1 MG189906_p76 hypothetical protein singleton unknown function unknown function 1 53809 54249
ATS92273.1 MG189906_p136 pyruvate phosphate dikinase phrog_18609 kinase other 1 85583 87520
ATS92285.1 MG189906_p61 RecA phrog_97 UvsX-like recombinase other 1 44117 45319
ATS92271.1 MG189906_p24 tail protein phrog_1101 tail protein tail 1 20499 22979
ATS92404.1 MG189906_p123 hypothetical protein singleton unknown function unknown function 1 79163 79342
ATS92292.1 MG189906_p141 hypothetical protein phrog_20946 unknown function unknown function 1 89194 90210
ATS92369.1 MG189906_p79 hypothetical protein singleton unknown function unknown function 1 55743 56084
ATS92356.1 MG189906_p126 hypothetical protein singleton unknown function unknown function 1 80599 80988
ATS92409.1 MG189906_p4 hypothetical protein singleton unknown function unknown function 1 3883 4053
ATS92289.1 MG189906_p81 UDP-glucose 4-epimerase phrog_540 nucleotide-sugar epimerase DNA, RNA and nucleotide metabolism 1 56363 57469
ATS92316.1 MG189906_p125 hypothetical protein phrog_6452 unknown function unknown function 1 79868 80602
ATS92399.1 MG189906_p23 hypothetical protein phrog_1196 tail assembly chaperone tail 1 20300 20509
ATS92297.1 MG189906_p55 primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 39905 40870
ATS92353.1 MG189906_p59 transcriptional regulator phrog_19880 transcriptional regulator transcription regulation 1 43342 43743
ATS92323.1 MG189906_p42 hypothetical protein singleton unknown function unknown function 1 31794 32414
ATS92270.1 MG189906_p17 tape measure protein phrog_1107 tail length tape measure protein tail 1 11203 14958
ATS92355.1 MG189906_p112 hypothetical protein singleton unknown function unknown function 1 74940 75332
ATS92303.1 MG189906_p109 hypothetical protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 73334 74227
ATS92389.1 MG189906_p118 hypothetical protein singleton unknown function unknown function 1 76654 76905
ATS92392.1 MG189906_p94 hypothetical protein singleton unknown function unknown function 1 62204 62443
ATS92415.1 MG189906_p16 hypothetical protein singleton unknown function unknown function 1 11075 11197
ATS92382.1 MG189906_p91 hypothetical protein singleton unknown function unknown function 1 60974 61249
ATS92387.1 MG189906_p115 hypothetical protein singleton unknown function unknown function 1 75810 76064
ATS92306.1 MG189906_p143 hypothetical protein singleton unknown function unknown function 1 91099 91932
ATS92331.1 MG189906_p54 hypothetical protein singleton unknown function unknown function 1 39403 39912
ATS92291.1 MG189906_p100 WecE phrog_3139 aminotransferase other 1 65816 66862
ATS92379.1 MG189906_p148 hypothetical protein singleton unknown function unknown function 1 95447 95728
ATS92301.1 MG189906_p49 hypothetical protein phrog_428 replication initiation protein DNA, RNA and nucleotide metabolism 1 36063 36983
ATS92407.1 MG189906_p51 hypothetical protein singleton unknown function unknown function 1 37323 37496
ATS92328.1 MG189906_p73 hypothetical protein singleton unknown function unknown function 1 52106 52672
ATS92311.1 MG189906_p142 thymidylate synthase phrog_17568 thymidylate synthase DNA, RNA and nucleotide metabolism 1 90207 90995
ATS92321.1 MG189906_p65 hypothetical protein phrog_229 MazG-like pyrophosphatase other 1 47046 47678
ATS92393.1 MG189906_p122 hypothetical protein singleton unknown function unknown function 1 78936 79166
ATS92281.1 MG189906_p2 ParB-like nuclease domain protein singleton unknown function unknown function 1 1892 3232
ATS92280.1 MG189906_p58 superfamily II DNA or RNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 41981 43345
ATS92344.1 MG189906_p38 hypothetical protein singleton unknown function unknown function 1 29426 29854
ATS92371.1 MG189906_p114 hypothetical protein phrog_21015 unknown function unknown function 1 75496 75813
ATS92367.1 MG189906_p129 hypothetical protein phrog_26100 unknown function unknown function 1 81633 81974
ATS92293.1 MG189906_p28 tail fiber protein phrog_24534 tail fiber protein tail 1 25139 26155
ATS92397.1 MG189906_p50 hypothetical protein singleton unknown function unknown function 1 37121 37333
ATS92312.1 MG189906_p56 hypothetical protein phrog_17226 unknown function unknown function 1 40948 41721
ATS92290.1 MG189906_p83 hypothetical protein singleton unknown function unknown function 1 57890 58948
ATS92274.1 MG189906_p108 terminase large subunit phrog_2 terminase large subunit head and packaging 1 71409 73322
ATS92363.1 MG189906_p89 hypothetical protein singleton unknown function unknown function 1 60148 60513
ATS92318.1 MG189906_p107 hypothetical protein singleton unknown function unknown function 1 70799 71446
ATS92278.1 MG189906_p104 n-acetyl-alpha-d-glucosaminyl l-malate synthase singleton unknown function unknown function 1 68211 69665
ATS92317.1 MG189906_p101 methyltransferase singleton unknown function unknown function 1 66859 67539
ATS92380.1 MG189906_p35 hypothetical protein singleton unknown function unknown function 1 28747 29028
ATS92336.1 MG189906_p69 hypothetical protein singleton unknown function unknown function 1 49108 49584
ATS92366.1 MG189906_p138 hypothetical protein singleton unknown function unknown function 1 87984 88325
ATS92416.1 MG189906_p130 hypothetical protein singleton unknown function unknown function -1 81954 82067
ATS92359.1 MG189906_p62 hypothetical protein phrog_2002 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 45319 45693
ATS92381.1 MG189906_p93 hypothetical protein singleton unknown function unknown function 1 61929 62207
ATS92368.1 MG189906_p80 hypothetical protein singleton unknown function unknown function 1 56097 56438
ATS92348.1 MG189906_p137 hypothetical protein singleton unknown function unknown function 1 87566 87982
ATS92305.1 MG189906_p106 ParBc phrog_26387 ParB-like partition nuclease DNA, RNA and nucleotide metabolism 1 69945 70799
ATS92405.1 MG189906_p87 hypothetical protein singleton unknown function unknown function 1 59778 59954
ATS92296.1 MG189906_p27 tail assembly protein phrog_9600 tail assembly protein tail 1 24164 25135
ATS92362.1 MG189906_p60 hypothetical protein singleton unknown function unknown function 1 43746 44117
ATS92326.1 MG189906_p96 hypothetical protein phrog_1372 unknown function unknown function 1 63306 63899
ATS92302.1 MG189906_p131 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 82047 82943
ATS92322.1 MG189906_p95 rhomboid membrane protein singleton unknown function unknown function 1 62627 63247
ATS92417.1 MG189906_p68 hypothetical protein singleton unknown function unknown function 1 48912 49025
ATS92308.1 MG189906_p66 hypothetical protein phrog_17202 unknown function unknown function 1 47761 48564
ATS92350.1 MG189906_p34 DUF2500 containing protein singleton unknown function unknown function 1 28353 28769
ATS92383.1 MG189906_p7 hypothetical protein singleton unknown function unknown function 1 6400 6669
ATS92339.1 MG189906_p90 hypothetical protein singleton unknown function unknown function 1 60510 60977
ATS92324.1 MG189906_p9 hypothetical protein singleton unknown function unknown function 1 7516 8127
ATS92282.1 MG189906_p53 helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 38053 39342
ATS92284.1 MG189906_p134 hypothetical protein phrog_10401 ATPase other 1 83709 84920
ATS92384.1 MG189906_p147 hypothetical protein singleton unknown function unknown function 1 95076 95336
ATS92376.1 MG189906_p12 hypothetical protein singleton unknown function unknown function 1 9068 9361
ATS92338.1 MG189906_p140 tyrosine phosphatase family protein phrog_17568 thymidylate synthase DNA, RNA and nucleotide metabolism 1 88682 89152
ATS92403.1 MG189906_p88 hypothetical protein singleton unknown function unknown function 1 59963 60145
ATS92335.1 MG189906_p145 hypothetical protein singleton unknown function unknown function 1 92173 92655
ATS92386.1 MG189906_p144 hypothetical protein singleton unknown function unknown function 1 91922 92176
ATS92342.1 MG189906_p11 hypothetical protein singleton unknown function unknown function 1 8546 8995
ATS92373.1 MG189906_p124 hypothetical protein singleton unknown function unknown function 1 79534 79842
ATS92325.1 MG189906_p3 serine protease phrog_15223 protease other 1 3288 3890
ATS92413.1 MG189906_p36 hypothetical protein singleton unknown function unknown function 1 29128 29262
ATS92345.1 MG189906_p29 hypothetical protein phrog_28727 holin lysis 1 26232 26660
ATS92299.1 MG189906_p6 major capsid protein phrog_1623 virion structural protein head and packaging 1 5387 6319
ATS92370.1 MG189906_p82 hypothetical protein singleton unknown function unknown function 1 57504 57824
ATS92276.1 MG189906_p20 hypothetical protein phrog_1082 tail assembly protein tail 1 17525 19201
ATS92354.1 MG189906_p139 transcriptional repressor singleton unknown function unknown function 1 88294 88692
ATS92307.1 MG189906_p21 minor tail protein phrog_778 tail assembly protein tail 1 19198 20016
ATS92395.1 MG189906_p57 hypothetical protein phrog_8389 unknown function unknown function 1 41757 41984
ATS92310.1 MG189906_p149 hypothetical protein singleton unknown function unknown function 1 95725 96516
ATS92294.1 MG189906_p25 tail assembly protein phrog_19976 tail assembly protein tail 1 22979 23977
ATS92411.1 MG189906_p67 hypothetical protein singleton unknown function unknown function 1 48749 48907
ATS92400.1 MG189906_p102 hypothetical protein singleton unknown function unknown function 1 67595 67795
ATS92360.1 MG189906_p13 hypothetical protein singleton unknown function unknown function 1 9372 9746
ATS92357.1 MG189906_p70 hypothetical protein singleton unknown function unknown function 1 49873 50262
ATS92327.1 MG189906_p135 hypothetical protein singleton unknown function unknown function 1 84917 85489
ATS92320.1 MG189906_p98 PIG-L family deacetylase phrog_11796 unknown function unknown function 1 64232 64870
ATS92346.1 MG189906_p103 hypothetical protein singleton unknown function unknown function 1 67792 68214
ATS92279.1 MG189906_p47 hypothetical protein singleton unknown function unknown function 1 34387 35778
ATS92378.1 MG189906_p48 hypothetical protein singleton unknown function unknown function 1 35778 36062
ATS92406.1 MG189906_p26 tail assembly protein phrog_26999 tail assembly protein tail 1 23980 24156
ATS92361.1 MG189906_p85 hypothetical protein singleton unknown function unknown function 1 59159 59530
ATS92349.1 MG189906_p132 hypothetical protein singleton unknown function unknown function 1 82940 83356
ATS92385.1 MG189906_p97 hypothetical protein singleton unknown function unknown function 1 63899 64156
ATS92333.1 MG189906_p15 hypothetical protein phrog_1442 tail assembly chaperone tail 1 10518 11012
ATS92277.1 MG189906_p18 hypothetical protein phrog_687 structural protein head and packaging 1 14965 16548
ATS92287.1 MG189906_p41 hypothetical protein phrog_10401 ATPase other 1 30532 31689
ATS92372.1 MG189906_p105 hypothetical protein singleton unknown function unknown function 1 69662 69973