| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG198777 |
Definition |
Corynebacterium phage Darwin, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Ceetrepovirus; Corynebacterium virus Darwin. |
DB of origin |
NUCCORE |
Length |
67743 |
Host Name |
Corynebacterium vitaeruminis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
94 |
%GC |
52.08 |
Number of singletons |
7 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATW58599.1 | MG198777_p49 | thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 42882 | 43178 |
| ATW58535.1 | MG198777_p32 | tapemeasure protein | phrog_6090 | tail length tape measure protein | tail | 1 | 20868 | 27299 |
| ATW58541.1 | MG198777_p77 | hypothetical protein | phrog_27887 | unknown function | unknown function | -1 | 59299 | 59466 |
| ATW58627.1 | MG198777_p30 | tail assembly chaperone | phrog_2624 | tail assembly chaperone | tail | 1 | 19987 | 20807 |
| ATW58617.1 | MG198777_p20 | major capsid protein | phrog_29 | major head protein | head and packaging | 1 | 13339 | 14403 |
| ATW58563.1 | MG198777_p2 | hypothetical protein | phrog_23468 | unknown function | unknown function | 1 | 644 | 1006 |
| ATW58581.1 | MG198777_p52 | hypothetical protein | phrog_19903 | unknown function | unknown function | -1 | 44608 | 44877 |
| ATW58585.1 | MG198777_p24 | hypothetical protein | phrog_24645 | unknown function | unknown function | 1 | 15718 | 16203 |
| ATW58572.1 | MG198777_p46 | hypothetical protein | phrog_1981 | unknown function | unknown function | -1 | 37944 | 38531 |
| ATW58548.1 | MG198777_p90 | hypothetical protein | phrog_23376 | unknown function | unknown function | 1 | 64733 | 64894 |
| ATW58600.1 | MG198777_p50 | hypothetical protein | phrog_9460 | methyltransferase | other | -1 | 43171 | 43791 |
| ATW58554.1 | MG198777_p28 | hypothetical protein | phrog_26941 | tail protein | tail | 1 | 17591 | 19402 |
| ATW58624.1 | MG198777_p66 | hypothetical protein | phrog_23403 | unknown function | unknown function | -1 | 49767 | 49838 |
| ATW58616.1 | MG198777_p19 | capsid decoration protein | phrog_3583 | head decoration | head and packaging | 1 | 12905 | 13324 |
| ATW58547.1 | MG198777_p89 | hypothetical protein | phrog_22795 | unknown function | unknown function | 1 | 64044 | 64733 |
| ATW58574.1 | MG198777_p13 | hypothetical protein | phrog_7785 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 6857 | 7273 |
| ATW58579.1 | MG198777_p56 | hypothetical protein | phrog_30188 | unknown function | unknown function | -1 | 45648 | 45848 |
| ATW58542.1 | MG198777_p78 | hypothetical protein | phrog_29553 | unknown function | unknown function | -1 | 59459 | 59650 |
| ATW58539.1 | MG198777_p75 | hypothetical protein | phrog_236 | nucleotide kinase | other | -1 | 58484 | 58699 |
| ATW58573.1 | MG198777_p11 | HNH endonuclease | phrog_1492 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 6015 | 6593 |
| ATW58587.1 | MG198777_p63 | hypothetical protein | phrog_27271 | unknown function | unknown function | -1 | 48112 | 48450 |
| ATW58619.1 | MG198777_p59 | hypothetical protein | phrog_27510 | unknown function | unknown function | -1 | 46322 | 46738 |
| ATW58628.1 | MG198777_p31 | tail assembly chaperone | phrog_8963 | tail assembly chaperone | tail | 1 | 19987 | 20316 |
| ATW58559.1 | MG198777_p72 | ribonucleotide reductase | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | -1 | 54907 | 57975 |
| ATW58568.1 | MG198777_p42 | DNA primase/polymerase | phrog_1156 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 34501 | 37044 |
| ATW58550.1 | MG198777_p93 | hypothetical protein | phrog_25657 | unknown function | unknown function | 1 | 66212 | 66376 |
| ATW58558.1 | MG198777_p71 | HNH endonuclease | phrog_1492 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 54362 | 54919 |
| ATW58592.1 | MG198777_p6 | hypothetical protein | phrog_21130 | unknown function | unknown function | -1 | 2234 | 3547 |
| ATW58594.1 | MG198777_p8 | hypothetical protein | phrog_24750 | unknown function | unknown function | 1 | 4526 | 4741 |
| ATW58556.1 | MG198777_p69 | ribonucleotide reductase | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | -1 | 51967 | 53913 |
| ATW58536.1 | MG198777_p33 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 27301 | 28167 |
| ATW58586.1 | MG198777_p25 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 16196 | 16639 |
| ATW58610.1 | MG198777_p84 | hypothetical protein | phrog_26937 | unknown function | unknown function | -1 | 61179 | 61337 |
| ATW58596.1 | MG198777_p10 | hypothetical protein | phrog_671 | nucleotide pyrophosphohydrolase | other | 1 | 5554 | 5970 |
| ATW58545.1 | MG198777_p87 | hypothetical protein | phrog_22440 | unknown function | unknown function | 1 | 62975 | 63340 |
| ATW58580.1 | MG198777_p57 | hypothetical protein | singleton | unknown function | unknown function | -1 | 45800 | 45991 |
| ATW58569.1 | MG198777_p43 | hypothetical protein | phrog_25610 | transcriptional regulator WhiB-like | transcription regulation | -1 | 37025 | 37276 |
| ATW58566.1 | MG198777_p5 | hypothetical protein | phrog_26769 | unknown function | unknown function | 1 | 1832 | 2038 |
| ATW58612.1 | MG198777_p15 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 7903 | 9510 |
| ATW58609.1 | MG198777_p83 | hypothetical protein | phrog_26901 | unknown function | unknown function | -1 | 60890 | 61186 |
| ATW58560.1 | MG198777_p73 | hypothetical protein | phrog_22962 | unknown function | unknown function | -1 | 57954 | 58187 |
| ATW58538.1 | MG198777_p35 | hypothetical protein | phrog_19576 | unknown function | unknown function | 1 | 29765 | 30280 |
| ATW58618.1 | MG198777_p58 | hypothetical protein | phrog_26827 | unknown function | unknown function | -1 | 46060 | 46329 |
| ATW58578.1 | MG198777_p55 | hypothetical protein | phrog_17374 | unknown function | unknown function | -1 | 45470 | 45661 |
| ATW58546.1 | MG198777_p88 | hypothetical protein | phrog_25985 | unknown function | unknown function | 1 | 63404 | 63964 |
| ATW58597.1 | MG198777_p47 | DNA polymerase III alpha subunit | phrog_405 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 38537 | 41830 |
| ATW58570.1 | MG198777_p44 | hypothetical protein | phrog_26692 | unknown function | unknown function | -1 | 37254 | 37541 |
| ATW58565.1 | MG198777_p4 | hypothetical protein | phrog_26131 | unknown function | unknown function | 1 | 1556 | 1804 |
| ATW58602.1 | MG198777_p36 | hypothetical protein | phrog_8672 | unknown function | unknown function | 1 | 30273 | 30731 |
| ATW58561.1 | MG198777_p74 | hypothetical protein | phrog_27426 | unknown function | unknown function | -1 | 58187 | 58417 |
| ATW58549.1 | MG198777_p92 | hypothetical protein | phrog_22592 | unknown function | unknown function | 1 | 65857 | 66150 |
| ATW58564.1 | MG198777_p3 | hypothetical protein | phrog_883 | flavodoxin | moron, auxiliary metabolic gene and host takeover | 1 | 1055 | 1531 |
| ATW58621.1 | MG198777_p61 | hypothetical protein | phrog_25349 | unknown function | unknown function | -1 | 47165 | 47728 |
| ATW58626.1 | MG198777_p91 | hypothetical protein | singleton | unknown function | unknown function | 1 | 65608 | 65733 |
| ATW58622.1 | MG198777_p62 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | -1 | 47745 | 48122 |
| ATW58606.1 | MG198777_p40 | holin | phrog_3428 | holin | lysis | 1 | 33818 | 34177 |
| ATW58557.1 | MG198777_p70 | hypothetical protein | phrog_22420 | unknown function | unknown function | -1 | 53972 | 54277 |
| ATW58591.1 | MG198777_p68 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 50040 | 51965 |
| ATW58598.1 | MG198777_p48 | hypothetical protein | phrog_24686 | unknown function | unknown function | -1 | 41861 | 42031 |
| ATW58595.1 | MG198777_p9 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 4738 | 5511 |
| ATW58562.1 | MG198777_p1 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 94 | 618 |
| ATW58620.1 | MG198777_p60 | hypothetical protein | phrog_2131 | unknown function | unknown function | -1 | 46731 | 47120 |
| ATW58625.1 | MG198777_p85 | hypothetical protein | phrog_24222 | unknown function | unknown function | 1 | 62330 | 62416 |
| ATW58577.1 | MG198777_p54 | hypothetical protein | singleton | unknown function | unknown function | -1 | 45136 | 45477 |
| ATW58615.1 | MG198777_p18 | hypothetical protein | phrog_26148 | unknown function | unknown function | 1 | 12408 | 12896 |
| ATW58552.1 | MG198777_p26 | major tail protein | phrog_476 | major tail protein | tail | 1 | 16706 | 17368 |
| ATW58614.1 | MG198777_p17 | capsid maturation protease | phrog_1522 | head maturation protease | head and packaging | 1 | 11087 | 12415 |
| ATW58544.1 | MG198777_p80 | hypothetical protein | phrog_27364 | unknown function | unknown function | -1 | 60251 | 60463 |
| ATW58567.1 | MG198777_p41 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34223 | 34378 |
| ATW58607.1 | MG198777_p81 | hypothetical protein | phrog_27383 | unknown function | unknown function | -1 | 60460 | 60684 |
| ATW58623.1 | MG198777_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6697 | 6756 |
| ATW58551.1 | MG198777_p94 | hypothetical protein | phrog_25451 | unknown function | unknown function | 1 | 66409 | 66681 |
| ATW58605.1 | MG198777_p39 | lysin A | phrog_1519 | endolysin | lysis | 1 | 32370 | 33815 |
| ATW58543.1 | MG198777_p79 | hypothetical protein | phrog_24895 | unknown function | unknown function | -1 | 59647 | 60162 |
| ATW58555.1 | MG198777_p29 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19405 | 19797 |
| ATW58582.1 | MG198777_p21 | hypothetical protein | phrog_6587 | head-tail connector protein | connector | 1 | 14405 | 14755 |
| ATW58603.1 | MG198777_p37 | hypothetical protein | phrog_20965 | unknown function | unknown function | 1 | 30731 | 31099 |
| ATW58593.1 | MG198777_p7 | hypothetical protein | phrog_19678 | unknown function | unknown function | 1 | 4141 | 4551 |
| ATW58613.1 | MG198777_p16 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 9510 | 11087 |
| ATW58576.1 | MG198777_p53 | excise | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 44874 | 45092 |
| ATW58601.1 | MG198777_p51 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 43795 | 44559 |
| ATW58588.1 | MG198777_p64 | hypothetical protein | phrog_27019 | unknown function | unknown function | -1 | 48447 | 48656 |
| ATW58608.1 | MG198777_p82 | hypothetical protein | phrog_27696 | unknown function | unknown function | -1 | 60677 | 60811 |
| ATW58575.1 | MG198777_p14 | HNH endonuclease | phrog_1492 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 7286 | 7858 |
| ATW58537.1 | MG198777_p34 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 28167 | 29765 |
| ATW58583.1 | MG198777_p22 | hypothetical protein | phrog_20694 | unknown function | unknown function | 1 | 14820 | 15293 |
| ATW58571.1 | MG198777_p45 | hypothetical protein | phrog_24873 | unknown function | unknown function | -1 | 37531 | 37899 |
| ATW58590.1 | MG198777_p67 | hypothetical protein | phrog_25590 | unknown function | unknown function | -1 | 49835 | 50050 |
| ATW58611.1 | MG198777_p86 | hypothetical protein | phrog_22440 | unknown function | unknown function | 1 | 62497 | 62862 |
| ATW58584.1 | MG198777_p23 | hypothetical protein | phrog_19417 | unknown function | unknown function | 1 | 15293 | 15718 |
| ATW58589.1 | MG198777_p65 | hypothetical protein | phrog_1218 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 48662 | 49774 |
| ATW58540.1 | MG198777_p76 | hypothetical protein | phrog_1384 | Mom-like DNA modification protein | other | -1 | 58708 | 59286 |
| ATW58553.1 | MG198777_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17398 | 17523 |
| ATW58604.1 | MG198777_p38 | hypothetical protein | phrog_16352 | unknown function | unknown function | 1 | 31080 | 32369 |