Genomic map of Gordonia phage Mahdia (MG198783)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG198783
Definition
Gordonia phage Mahdia, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gustavvirus; Gordonia virus Mahdia.
DB of origin
NUCCORE
Length
42475
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
61
%GC
67.24
Number of singletons
11
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATW59026.1 MG198783_p27 hypothetical protein phrog_240 head protein head and packaging 1 20874 21230
ATW59015.1 MG198783_p16 tapemeasure protein phrog_8927 tail length tape measure protein tail 1 9733 13983
ATW59046.1 MG198783_p47 hypothetical protein singleton unknown function unknown function -1 35611 35973
ATW59005.1 MG198783_p6 hypothetical protein phrog_4850 unknown function unknown function 1 5826 6041
ATW59045.1 MG198783_p46 hypothetical protein phrog_37793 unknown function unknown function -1 35236 35508
ATW59054.1 MG198783_p55 hypothetical protein phrog_33707 unknown function unknown function -1 39343 39792
ATW59041.1 MG198783_p42 hypothetical protein singleton unknown function unknown function -1 32187 32468
ATW59016.1 MG198783_p17 hypothetical protein phrog_106 minor tail protein tail 1 13987 14814
ATW59056.1 MG198783_p57 hypothetical protein phrog_38156 unknown function unknown function 1 40678 41157
ATW59032.1 MG198783_p33 hypothetical protein phrog_37375 unknown function unknown function -1 24866 25531
ATW59008.1 MG198783_p9 hypothetical protein phrog_8079 neck protein connector 1 6893 7174
ATW59033.1 MG198783_p34 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 25536 27314
ATW59051.1 MG198783_p52 hypothetical protein singleton unknown function unknown function -1 38209 38496
ATW59060.1 MG198783_p61 hypothetical protein phrog_31087 unknown function unknown function 1 42127 42396
ATW59019.1 MG198783_p20 hypothetical protein phrog_33260 minor tail protein tail 1 16665 17096
ATW59031.1 MG198783_p32 hypothetical protein phrog_11324 nucleotide kinase other -1 24492 24869
ATW59023.1 MG198783_p24 membrane protein phrog_33440 unknown function unknown function 1 19375 19656
ATW59048.1 MG198783_p49 hypothetical protein singleton unknown function unknown function -1 36286 37080
ATW59004.1 MG198783_p5 major capsid protein phrog_10 major head protein head and packaging 1 4537 5790
ATW59011.1 MG198783_p12 hypothetical protein phrog_34879 unknown function unknown function 1 8190 8435
ATW59001.1 MG198783_p2 terminase phrog_9 terminase large subunit head and packaging 1 553 2121
ATW59035.1 MG198783_p36 hypothetical protein phrog_15923 unknown function unknown function -1 28168 28365
ATW59058.1 MG198783_p59 resolvase phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 41385 41786
ATW59025.1 MG198783_p26 hypothetical protein phrog_1126 unknown function unknown function 1 20538 20870
ATW59017.1 MG198783_p18 minor tail protein phrog_110 minor tail protein tail 1 14818 16428
ATW59006.1 MG198783_p7 hypothetical protein phrog_442 head-tail adaptor connector 1 6047 6601
ATW59043.1 MG198783_p44 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 32724 34961
ATW59007.1 MG198783_p8 hypothetical protein phrog_763 head-tail adaptor connector 1 6589 6891
ATW59024.1 MG198783_p25 hypothetical protein phrog_12076 unknown function unknown function 1 19653 20525
ATW59018.1 MG198783_p19 hypothetical protein phrog_5120 unknown function unknown function 1 16436 16672
ATW59038.1 MG198783_p39 hypothetical protein singleton unknown function unknown function -1 31106 31423
ATW59036.1 MG198783_p37 RepA phrog_906 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 28362 30848
ATW59009.1 MG198783_p10 hypothetical protein phrog_6485 tail terminator connector 1 7171 7596
ATW59034.1 MG198783_p35 lysin B phrog_102 endolysin lysis 1 27405 28184
ATW59022.1 MG198783_p23 membrane protein phrog_8672 unknown function unknown function 1 18947 19378
ATW59052.1 MG198783_p53 hypothetical protein singleton unknown function unknown function -1 38493 39089
ATW59055.1 MG198783_p56 hypothetical protein singleton unknown function unknown function 1 40358 40681
ATW59029.1 MG198783_p30 hypothetical protein singleton unknown function unknown function -1 23087 23401
ATW59013.1 MG198783_p14 tail assembly chaperone phrog_17338 tail assembly chaperone tail 1 8824 9300
ATW59039.1 MG198783_p40 hypothetical protein singleton unknown function unknown function -1 31420 31815
ATW59057.1 MG198783_p58 hypothetical protein phrog_31258 unknown function unknown function 1 41147 41392
ATW59037.1 MG198783_p38 hypothetical protein phrog_3424 unknown function unknown function -1 30855 31109
ATW59020.1 MG198783_p21 lysin A phrog_2998 endolysin lysis 1 17103 18704
ATW59002.1 MG198783_p3 portal protein phrog_12 portal protein head and packaging 1 2134 3525
ATW59027.1 MG198783_p28 hypothetical protein phrog_34086 unknown function unknown function 1 21227 22375
ATW59012.1 MG198783_p13 hypothetical protein phrog_18254 unknown function unknown function 1 8477 8827
ATW59049.1 MG198783_p50 hypothetical protein phrog_636 unknown function unknown function -1 37172 37783
ATW59003.1 MG198783_p4 capsid maturation protease phrog_3244 head maturation protease head and packaging 1 3528 4496
ATW59047.1 MG198783_p48 DNA binding protein singleton unknown function unknown function -1 35943 36278
ATW59028.1 MG198783_p29 hypothetical protein phrog_870 unknown function unknown function -1 22475 23020
ATW59044.1 MG198783_p45 hypothetical protein phrog_34835 unknown function unknown function -1 34958 35239
ATW59059.1 MG198783_p60 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41790 42113
ATW59050.1 MG198783_p51 hypothetical protein phrog_32658 unknown function unknown function -1 37877 38212
ATW59040.1 MG198783_p41 hypothetical protein phrog_1570 unknown function unknown function -1 31843 32100
ATW59030.1 MG198783_p31 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism -1 23398 24495
ATW59053.1 MG198783_p54 hypothetical protein phrog_34184 unknown function unknown function -1 39086 39346
ATW59014.1 MG198783_p15 tail assembly chaperone phrog_35384 tail assembly chaperone tail 1 9351 9743
ATW59021.1 MG198783_p22 membrane protein phrog_443 holin lysis 1 18708 18950
ATW59042.1 MG198783_p43 hypothetical protein singleton unknown function unknown function -1 32546 32731
ATW59010.1 MG198783_p11 major tail protein phrog_117 major tail protein tail 1 7651 8193
ATW59000.1 MG198783_p1 hypothetical protein phrog_37254 unknown function unknown function 1 125 556