Genomic map of Escherichia phage PGT2 (MG201401)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG201401
Definition
Escherichia phage PGT2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Ermolevavirus; Escherichia virus PGT2.
DB of origin
NUCCORE
Length
42686
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
46
%GC
51.64
Number of singletons
13
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATS92458.1 MG201401_p40 tail fiber protein phrog_13173 tail fiber protein tail 1 35754 38516
ATS92459.1 MG201401_p41 hypothetical protein phrog_34686 unknown function unknown function 1 38526 38897
ATS92425.1 MG201401_p7 hypothetical protein singleton unknown function unknown function 1 3505 3618
ATS92435.1 MG201401_p17 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 7451 7852
ATS92423.1 MG201401_p5 hypothetical protein phrog_2226 SAM-dependent methyltransferase other 1 2683 3177
ATS92457.1 MG201401_p39 internal virion protein phrog_342 internal virion protein with endolysin domain head and packaging 1 31510 35712
ATS92437.1 MG201401_p19 deoxyribonucleoside 5'-monophosphate phosphatase phrog_318 deoxyribonucleoside 5' monophosphate phosphatase other 1 9129 9716
ATS92422.1 MG201401_p4 hypothetical protein phrog_9817 unknown function unknown function 1 2374 2640
ATS92440.1 MG201401_p22 hypothetical protein phrog_862 unknown function unknown function 1 12392 13330
ATS92431.1 MG201401_p13 hypothetical protein singleton unknown function unknown function 1 5471 5761
ATS92444.1 MG201401_p26 hypothetical protein phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 15795 16292
ATS92450.1 MG201401_p32 head-to-tail joining protein phrog_449 head-tail adaptor connector 1 21503 23056
ATS92451.1 MG201401_p33 scaffold-like protein phrog_1018 head scaffolding protein head and packaging 1 23066 23986
ATS92455.1 MG201401_p37 hypothetical protein phrog_37425 unknown function unknown function 1 28335 29162
ATS92443.1 MG201401_p25 hypothetical protein phrog_221 metallo-phosphoesterase other 1 14783 15772
ATS92441.1 MG201401_p23 5'-3' exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 13332 14282
ATS92429.1 MG201401_p11 hypothetical protein singleton unknown function unknown function 1 4623 5132
ATS92448.1 MG201401_p30 hypothetical protein singleton unknown function unknown function 1 19949 20551
ATS92453.1 MG201401_p35 tail tubular protein A phrog_446 tail protein tail 1 25084 25698
ATS92461.1 MG201401_p43 hypothetical protein singleton unknown function unknown function 1 40958 41245
ATS92464.1 MG201401_p46 hypothetical protein phrog_175 holin lysis 1 41867 42250
ATS92424.1 MG201401_p6 hypothetical protein phrog_10124 unknown function unknown function 1 3179 3427
ATS92433.1 MG201401_p15 hypothetical protein singleton unknown function unknown function 1 6370 6645
ATS92419.1 MG201401_p1 hypothetical protein singleton unknown function unknown function 1 453 656
ATS92462.1 MG201401_p44 endolysin phrog_7 endolysin lysis 1 41242 41694
ATS92426.1 MG201401_p8 hypothetical protein singleton unknown function unknown function 1 3683 3862
ATS92420.1 MG201401_p2 hypothetical protein phrog_25588 unknown function unknown function 1 1699 1857
ATS92427.1 MG201401_p9 hypothetical protein singleton unknown function unknown function 1 3855 4103
ATS92460.1 MG201401_p42 DNA maturase B phrog_38 terminase large subunit head and packaging 1 38888 40696
ATS92447.1 MG201401_p29 hypothetical protein phrog_37045 unknown function unknown function 1 19510 19938
ATS92463.1 MG201401_p45 hypothetical protein phrog_35982 unknown function unknown function 1 41687 41857
ATS92430.1 MG201401_p12 hypothetical protein singleton unknown function unknown function 1 5151 5462
ATS92439.1 MG201401_p21 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 9996 12389
ATS92436.1 MG201401_p18 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 7849 9132
ATS92432.1 MG201401_p14 hypothetical protein singleton unknown function unknown function 1 5965 6270
ATS92438.1 MG201401_p20 replication initiation protein phrog_154 replication initiation protein DNA, RNA and nucleotide metabolism 1 9703 9996
ATS92428.1 MG201401_p10 hypothetical protein singleton unknown function unknown function 1 4285 4620
ATS92449.1 MG201401_p31 hypothetical protein singleton unknown function unknown function 1 20553 21491
ATS92442.1 MG201401_p24 exonuclease VII phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 14293 14775
ATS92421.1 MG201401_p3 hypothetical protein phrog_871 unknown function unknown function 1 2123 2362
ATS92445.1 MG201401_p27 dNMP kinase phrog_139 deoxynucleoside monophosphate kinase other 1 16333 17052
ATS92446.1 MG201401_p28 RNA polymerase phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism 1 17006 18976
ATS92456.1 MG201401_p38 hypothetical protein phrog_3883 internal virion protein head and packaging 1 29172 31490
ATS92452.1 MG201401_p34 major capsid protein phrog_267 major head protein head and packaging 1 24036 25019
ATS92434.1 MG201401_p16 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 6645 7466
ATS92454.1 MG201401_p36 tail tubular protein B phrog_457 tail protein tail 1 25702 28332