| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG201401 |
Definition |
Escherichia phage PGT2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Ermolevavirus; Escherichia virus PGT2. |
DB of origin |
NUCCORE |
Length |
42686 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
46 |
%GC |
51.64 |
Number of singletons |
13 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATS92458.1 | MG201401_p40 | tail fiber protein | phrog_13173 | tail fiber protein | tail | 1 | 35754 | 38516 |
| ATS92459.1 | MG201401_p41 | hypothetical protein | phrog_34686 | unknown function | unknown function | 1 | 38526 | 38897 |
| ATS92425.1 | MG201401_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3505 | 3618 |
| ATS92435.1 | MG201401_p17 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 7451 | 7852 |
| ATS92423.1 | MG201401_p5 | hypothetical protein | phrog_2226 | SAM-dependent methyltransferase | other | 1 | 2683 | 3177 |
| ATS92457.1 | MG201401_p39 | internal virion protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 31510 | 35712 |
| ATS92437.1 | MG201401_p19 | deoxyribonucleoside 5'-monophosphate phosphatase | phrog_318 | deoxyribonucleoside 5' monophosphate phosphatase | other | 1 | 9129 | 9716 |
| ATS92422.1 | MG201401_p4 | hypothetical protein | phrog_9817 | unknown function | unknown function | 1 | 2374 | 2640 |
| ATS92440.1 | MG201401_p22 | hypothetical protein | phrog_862 | unknown function | unknown function | 1 | 12392 | 13330 |
| ATS92431.1 | MG201401_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5471 | 5761 |
| ATS92444.1 | MG201401_p26 | hypothetical protein | phrog_1035 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 15795 | 16292 |
| ATS92450.1 | MG201401_p32 | head-to-tail joining protein | phrog_449 | head-tail adaptor | connector | 1 | 21503 | 23056 |
| ATS92451.1 | MG201401_p33 | scaffold-like protein | phrog_1018 | head scaffolding protein | head and packaging | 1 | 23066 | 23986 |
| ATS92455.1 | MG201401_p37 | hypothetical protein | phrog_37425 | unknown function | unknown function | 1 | 28335 | 29162 |
| ATS92443.1 | MG201401_p25 | hypothetical protein | phrog_221 | metallo-phosphoesterase | other | 1 | 14783 | 15772 |
| ATS92441.1 | MG201401_p23 | 5'-3' exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 13332 | 14282 |
| ATS92429.1 | MG201401_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4623 | 5132 |
| ATS92448.1 | MG201401_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19949 | 20551 |
| ATS92453.1 | MG201401_p35 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 25084 | 25698 |
| ATS92461.1 | MG201401_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40958 | 41245 |
| ATS92464.1 | MG201401_p46 | hypothetical protein | phrog_175 | holin | lysis | 1 | 41867 | 42250 |
| ATS92424.1 | MG201401_p6 | hypothetical protein | phrog_10124 | unknown function | unknown function | 1 | 3179 | 3427 |
| ATS92433.1 | MG201401_p15 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6370 | 6645 |
| ATS92419.1 | MG201401_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 453 | 656 |
| ATS92462.1 | MG201401_p44 | endolysin | phrog_7 | endolysin | lysis | 1 | 41242 | 41694 |
| ATS92426.1 | MG201401_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3683 | 3862 |
| ATS92420.1 | MG201401_p2 | hypothetical protein | phrog_25588 | unknown function | unknown function | 1 | 1699 | 1857 |
| ATS92427.1 | MG201401_p9 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3855 | 4103 |
| ATS92460.1 | MG201401_p42 | DNA maturase B | phrog_38 | terminase large subunit | head and packaging | 1 | 38888 | 40696 |
| ATS92447.1 | MG201401_p29 | hypothetical protein | phrog_37045 | unknown function | unknown function | 1 | 19510 | 19938 |
| ATS92463.1 | MG201401_p45 | hypothetical protein | phrog_35982 | unknown function | unknown function | 1 | 41687 | 41857 |
| ATS92430.1 | MG201401_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5151 | 5462 |
| ATS92439.1 | MG201401_p21 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 9996 | 12389 |
| ATS92436.1 | MG201401_p18 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 7849 | 9132 |
| ATS92432.1 | MG201401_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5965 | 6270 |
| ATS92438.1 | MG201401_p20 | replication initiation protein | phrog_154 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 9703 | 9996 |
| ATS92428.1 | MG201401_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4285 | 4620 |
| ATS92449.1 | MG201401_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20553 | 21491 |
| ATS92442.1 | MG201401_p24 | exonuclease VII | phrog_423 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 14293 | 14775 |
| ATS92421.1 | MG201401_p3 | hypothetical protein | phrog_871 | unknown function | unknown function | 1 | 2123 | 2362 |
| ATS92445.1 | MG201401_p27 | dNMP kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 16333 | 17052 |
| ATS92446.1 | MG201401_p28 | RNA polymerase | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 17006 | 18976 |
| ATS92456.1 | MG201401_p38 | hypothetical protein | phrog_3883 | internal virion protein | head and packaging | 1 | 29172 | 31490 |
| ATS92452.1 | MG201401_p34 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 24036 | 25019 |
| ATS92434.1 | MG201401_p16 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 6645 | 7466 |
| ATS92454.1 | MG201401_p36 | tail tubular protein B | phrog_457 | tail protein | tail | 1 | 25702 | 28332 |