| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG208881 |
Definition |
Escherichia phage St11Ph5, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Gamaleyavirus; unclassified Gamaleyavirus. |
DB of origin |
NUCCORE |
Length |
72444 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
89 |
%GC |
42.64 |
Number of singletons |
6 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATS92516.1 | MG208881_p53 | DNS protein | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 28746 | 30899 |
| ATS92505.1 | MG208881_p42 | hypothetical protein | phrog_7471 | unknown function | unknown function | 1 | 16851 | 17042 |
| ATS92493.1 | MG208881_p30 | hypothetical protein | phrog_11132 | unknown function | unknown function | 1 | 10512 | 10841 |
| ATS92535.1 | MG208881_p72 | Rz/RzI spanin protein | phrog_6197 | Rz-like spanin | lysis | -1 | 59780 | 60286 |
| ATS92496.1 | MG208881_p33 | dCTP deaminase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | 1 | 13111 | 13617 |
| ATS92510.1 | MG208881_p47 | DNA helicase | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 22560 | 23870 |
| ATS92492.1 | MG208881_p29 | hypothetical protein | phrog_7665 | unknown function | unknown function | 1 | 10326 | 10511 |
| ATS92526.1 | MG208881_p63 | structural protein | phrog_6126 | virion structural protein | head and packaging | -1 | 47996 | 49942 |
| ATS92507.1 | MG208881_p44 | rIIB-like protein | phrog_2886 | RIIB lysis inhibitor | lysis | 1 | 19642 | 21690 |
| ATS92497.1 | MG208881_p34 | hypothetical protein | phrog_7594 | unknown function | unknown function | 1 | 13627 | 13836 |
| ATS92475.1 | MG208881_p11 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 3100 | 3414 |
| ATS92480.1 | MG208881_p16 | hypothetical protein | phrog_7827 | unknown function | unknown function | 1 | 4477 | 4791 |
| ATS92536.1 | MG208881_p74 | N-acetylmuramidase | phrog_315 | endolysin | lysis | -1 | 60267 | 60902 |
| ATS92498.1 | MG208881_p35 | membrane immunity protein | phrog_1039 | immunity to superinfection | moron, auxiliary metabolic gene and host takeover | 1 | 13910 | 14161 |
| ATS92532.1 | MG208881_p69 | hypothetical protein | phrog_2120 | tail length tape measure protein | tail | -1 | 55909 | 57129 |
| ATS92540.1 | MG208881_p78 | hypothetical protein | phrog_2423 | unknown function | unknown function | -1 | 63886 | 64035 |
| ATS92545.1 | MG208881_p83 | hypothetical protein | phrog_7213 | unknown function | unknown function | 1 | 70035 | 70313 |
| ATS92491.1 | MG208881_p28 | hypothetical protein | phrog_19185 | unknown function | unknown function | 1 | 10069 | 10329 |
| ATS92515.1 | MG208881_p52 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 27769 | 28749 |
| ATS92465.1 | MG208881_p1 | hypothetical protein | phrog_5020 | unknown function | unknown function | 1 | 141 | 464 |
| ATS92544.1 | MG208881_p82 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 69162 | 69851 |
| ATZ35296.1 | MG208881_p73 | Rz/RzI spanin protein | singleton | unknown function | unknown function | -1 | 59833 | 60120 |
| ATZ35295.1 | MG208881_p24 | hypothetical protein | phrog_12530 | unknown function | unknown function | 1 | 8312 | 8494 |
| ATS92484.1 | MG208881_p20 | hypothetical protein | phrog_14487 | unknown function | unknown function | 1 | 5696 | 5956 |
| ATS92509.1 | MG208881_p46 | hypothetical protein | phrog_671 | nucleotide pyrophosphohydrolase | other | 1 | 22165 | 22527 |
| ATS92485.1 | MG208881_p21 | RNA polymerase 1 subunit B | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 6010 | 6828 |
| ATS92476.1 | MG208881_p12 | hypothetical protein | phrog_10124 | unknown function | unknown function | 1 | 3401 | 3646 |
| ATS92500.1 | MG208881_p37 | hypothetical protein | phrog_9867 | unknown function | unknown function | 1 | 14656 | 15099 |
| ATS92520.1 | MG208881_p57 | hypothetical protein | phrog_7641 | unknown function | unknown function | 1 | 33107 | 33550 |
| ATS92550.1 | MG208881_p88 | hypothetical protein | phrog_1365 | unknown function | unknown function | 1 | 71854 | 72183 |
| ATS92538.1 | MG208881_p76 | hypothetical protein | phrog_5211 | unknown function | unknown function | -1 | 61137 | 61466 |
| ATS92499.1 | MG208881_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14346 | 14489 |
| ATS92547.1 | MG208881_p85 | hypothetical protein | phrog_11661 | unknown function | unknown function | 1 | 70923 | 71192 |
| ATS92473.1 | MG208881_p9 | hypothetical protein | phrog_7648 | unknown function | unknown function | 1 | 2619 | 2750 |
| ATS92508.1 | MG208881_p45 | hypothetical protein | phrog_6377 | unknown function | unknown function | 1 | 21753 | 22148 |
| ATS92549.1 | MG208881_p87 | hypothetical protein | phrog_12606 | unknown function | unknown function | 1 | 71516 | 71857 |
| ATS92531.1 | MG208881_p68 | major coat protein | phrog_1357 | major head protein | head and packaging | -1 | 54690 | 55892 |
| ATS92474.1 | MG208881_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2753 | 2965 |
| ATS92518.1 | MG208881_p55 | ssDNA-binding protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31748 | 32551 |
| ATS92537.1 | MG208881_p75 | holin protein | phrog_1356 | holin | lysis | -1 | 60892 | 61152 |
| ATS92519.1 | MG208881_p56 | hypothetical protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 32551 | 33105 |
| ATS92467.1 | MG208881_p3 | hypothetical protein | phrog_20790 | unknown function | unknown function | 1 | 938 | 1153 |
| ATS92548.1 | MG208881_p86 | hypothetical protein | phrog_12099 | unknown function | unknown function | 1 | 71196 | 71519 |
| ATS92483.1 | MG208881_p19 | hypothetical protein | phrog_2072 | unknown function | unknown function | 1 | 5343 | 5693 |
| ATS92524.1 | MG208881_p61 | hypothetical protein | phrog_29107 | unknown function | unknown function | 1 | 36778 | 37071 |
| ATS92501.1 | MG208881_p38 | thymidilate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 15099 | 16043 |
| ATS92511.1 | MG208881_p48 | hypothetical protein | phrog_4881 | unknown function | unknown function | 1 | 23881 | 24411 |
| ATS92529.1 | MG208881_p66 | tail protein | phrog_2050 | virion structural protein | head and packaging | -1 | 53068 | 53910 |
| ATS92527.1 | MG208881_p64 | structural protein | phrog_2646 | unknown function | unknown function | -1 | 49955 | 50398 |
| ATS92477.1 | MG208881_p13 | hypothetical protein | phrog_6887 | unknown function | unknown function | 1 | 3648 | 3869 |
| ATS92506.1 | MG208881_p43 | rIIA-like protein | phrog_2979 | RIIA lysis inhibitor | lysis | 1 | 17070 | 19637 |
| ATS92488.1 | MG208881_p25 | capsid decorating protein | phrog_2973 | Hoc-like head decoration | head and packaging | 1 | 8568 | 9401 |
| ATS92495.1 | MG208881_p32 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 11936 | 13111 |
| ATS92490.1 | MG208881_p27 | hypothetical protein | phrog_7508 | unknown function | unknown function | 1 | 9885 | 10097 |
| ATS92521.1 | MG208881_p58 | hypothetical protein | phrog_14773 | unknown function | unknown function | 1 | 33782 | 33952 |
| ATS92513.1 | MG208881_p50 | hypothetical protein | phrog_5974 | unknown function | unknown function | 1 | 26997 | 27302 |
| ATS92503.1 | MG208881_p40 | hypothetical protein | phrog_7900 | unknown function | unknown function | 1 | 16339 | 16551 |
| ATS92523.1 | MG208881_p60 | hypothetical protein | phrog_322 | unknown function | unknown function | 1 | 36264 | 36644 |
| ATS92517.1 | MG208881_p54 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 30956 | 31708 |
| ATS92470.1 | MG208881_p6 | hypothetical protein | phrog_13158 | unknown function | unknown function | 1 | 2107 | 2325 |
| ATS92481.1 | MG208881_p17 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 4788 | 5168 |
| ATS92551.1 | MG208881_p89 | hypothetical protein | phrog_19797 | unknown function | unknown function | 1 | 72185 | 72319 |
| ATS92489.1 | MG208881_p26 | hypothetical protein | phrog_1510 | superinfection exclusion | moron, auxiliary metabolic gene and host takeover | 1 | 9469 | 9783 |
| ATS92514.1 | MG208881_p51 | hypothetical protein | phrog_9919 | unknown function | unknown function | 1 | 27302 | 27769 |
| ATS92478.1 | MG208881_p14 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 3866 | 4222 |
| ATS92468.1 | MG208881_p4 | RNA polymerase 1 subunit A | phrog_4099 | unknown function | unknown function | 1 | 1189 | 1662 |
| ATS92541.1 | MG208881_p79 | tail fiber protein | phrog_20231 | tail protein | tail | -1 | 64035 | 66872 |
| ATS92472.1 | MG208881_p8 | hypothetical protein | phrog_5407 | unknown function | unknown function | 1 | 2461 | 2634 |
| ATS92528.1 | MG208881_p65 | hypothetical protein | phrog_2220 | unknown function | unknown function | -1 | 50412 | 53066 |
| ATS92539.1 | MG208881_p77 | tail fiber protein | singleton | unknown function | unknown function | -1 | 61683 | 63590 |
| ATS92512.1 | MG208881_p49 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 24421 | 27000 |
| ATS92471.1 | MG208881_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2325 | 2471 |
| ATS92543.1 | MG208881_p81 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | -1 | 67580 | 69169 |
| ATS92487.1 | MG208881_p23 | RNA polymerase 2 subunit A | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 7037 | 8254 |
| ATS92502.1 | MG208881_p39 | hypothetical protein | phrog_12633 | unknown function | unknown function | 1 | 16063 | 16278 |
| ATS92486.1 | MG208881_p22 | hypothetical protein | phrog_15352 | unknown function | unknown function | 1 | 6818 | 6979 |
| ATS92542.1 | MG208881_p80 | tail protein | phrog_2125 | virion structural protein | head and packaging | -1 | 66863 | 67573 |
| ATS92533.1 | MG208881_p70 | hypothetical protein | phrog_2346 | unknown function | unknown function | -1 | 57149 | 57493 |
| ATS92534.1 | MG208881_p71 | portal protein | phrog_1216 | portal protein | head and packaging | -1 | 57507 | 59777 |
| ATS92530.1 | MG208881_p67 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 53981 | 54622 |
| ATS92546.1 | MG208881_p84 | hypothetical protein | phrog_9160 | unknown function | unknown function | 1 | 70514 | 70912 |
| ATS92466.1 | MG208881_p2 | hypothetical protein | phrog_24403 | unknown function | unknown function | 1 | 555 | 884 |
| ATS92522.1 | MG208881_p59 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 35842 | 36117 |
| ATS92479.1 | MG208881_p15 | hypothetical protein | phrog_1972 | unknown function | unknown function | 1 | 4223 | 4480 |
| ATS92482.1 | MG208881_p18 | hypothetical protein | phrog_13804 | unknown function | unknown function | 1 | 5161 | 5346 |
| ATS92525.1 | MG208881_p62 | virion RNA polymerase | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 37105 | 47892 |
| ATS92504.1 | MG208881_p41 | hypothetical protein | phrog_9004 | unknown function | unknown function | 1 | 16544 | 16858 |
| ATS92494.1 | MG208881_p31 | hypothetical protein | phrog_1297 | ATPase | other | 1 | 10876 | 11928 |
| ATS92469.1 | MG208881_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1875 | 2102 |