Genomic map of Sinorhizobium phage HMSP1-Susan (MG214783)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG214783
Definition
Sinorhizobium phage HMSP1-Susan, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
51963
Host Name
Sinorhizobium meliloti
Host domain
Bacteria
Is prophage?
undef
Number of proteins
96
%GC
52.51
Number of singletons
56
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATS92119.1 MG214783_p73 hypothetical protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism -1 44573 45061
ATS92139.1 MG214783_p95 hypothetical protein singleton unknown function unknown function -1 51000 51284
ATS92097.1 MG214783_p50 hypothetical protein singleton unknown function unknown function 1 29275 29520
ATS92100.1 MG214783_p54 hypothetical protein singleton unknown function unknown function -1 30620 30973
ATS92127.2 MG214783_p83 hypothetical protein singleton unknown function unknown function -1 47553 47717
ATS92184.1 MG214783_p45 hypothetical protein singleton unknown function unknown function 1 24154 24372
ATS92167.1 MG214783_p28 head protein phrog_530 head maturation protease head and packaging 1 12026 13159
ATS92177.1 MG214783_p38 hypothetical protein phrog_8985 tail tube protein tail 1 17130 17486
ATS92148.2 MG214783_p7 hypothetical protein singleton unknown function unknown function 1 1739 1936
ATS92111.1 MG214783_p65 hypothetical protein singleton unknown function unknown function 1 39373 39606
ATS92150.1 MG214783_p10 hypothetical protein singleton unknown function unknown function 1 2282 2917
ATS92143.1 MG214783_p3 hypothetical protein phrog_32808 unknown function unknown function 1 1000 1215
ATS92110.1 MG214783_p64 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 37647 39266
ATS92156.1 MG214783_p15 transcriptional regulator phrog_7950 transcriptional repressor transcription regulation 1 4036 4251
ATS92171.1 MG214783_p32 hypothetical protein phrog_302 virion structural protein head and packaging 1 15128 15556
ATS92129.1 MG214783_p85 hypothetical protein singleton unknown function unknown function -1 48252 48581
ATS92147.1 MG214783_p6 hypothetical protein singleton unknown function unknown function 1 1545 1733
ATS92132.1 MG214783_p89 hypothetical protein phrog_14341 transcriptional repressor transcription regulation -1 49387 49935
ATS92144.1 MG214783_p2 hypothetical protein singleton unknown function unknown function 1 829 981
ATS92108.1 MG214783_p62 hypothetical protein phrog_289 GTP-binding domain other 1 36909 37268
ATS92102.1 MG214783_p56 DNA polymerase phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism -1 31402 33330
ATS92099.1 MG214783_p52 hypothetical protein singleton unknown function unknown function 1 29638 30096
ATS92134.1 MG214783_p90 hypothetical protein phrog_17551 unknown function unknown function -1 49925 50128
ATS92140.2 MG214783_p96 hypothetical protein singleton unknown function unknown function -1 51320 51691
ATS92182.1 MG214783_p43 hypothetical protein phrog_2134 unknown function unknown function 1 20912 21346
ATS92181.1 MG214783_p42 hypothetical protein phrog_2048 tail protein tail 1 20341 20904
ATS92180.1 MG214783_p41 hypothetical protein phrog_1302 distal tail protein tail 1 19724 20341
ATS92162.1 MG214783_p22 hypothetical protein singleton unknown function unknown function 1 7523 7768
ATS92163.1 MG214783_p23 hypothetical protein singleton unknown function unknown function 1 7747 8529
AVI24634.1 MG214783_p21 hypothetical protein singleton unknown function unknown function 1 7251 7544
ATS92174.1 MG214783_p36 hypothetical protein phrog_176 tail terminator connector 1 16229 16654
ATS92136.1 MG214783_p92 hypothetical protein singleton unknown function unknown function -1 50313 50573
ATS92164.1 MG214783_p24 head protein phrog_146 portal protein head and packaging 1 8628 10418
ATS92152.1 MG214783_p11 hypothetical protein singleton unknown function unknown function 1 2917 3225
ATS92118.2 MG214783_p72 hypothetical protein singleton unknown function unknown function -1 44352 44576
ATS92107.1 MG214783_p61 hypothetical protein phrog_29341 unknown function unknown function -1 36201 36818
ATS92121.1 MG214783_p75 hypothetical protein singleton unknown function unknown function -1 45244 45537
AVI24639.1 MG214783_p81 hypothetical protein phrog_13631 unknown function unknown function -1 46620 47027
ATS92157.1 MG214783_p16 terminase small subunit phrog_51 terminase small subunit head and packaging 1 4253 4810
ATS92114.1 MG214783_p68 DNA methylase phrog_67 DNA methyltransferase other 1 40334 41080
ATS92158.1 MG214783_p17 hypothetical protein singleton unknown function unknown function 1 4807 5025
ATS92122.1 MG214783_p76 hypothetical protein singleton unknown function unknown function -1 45530 45691
ATS92155.1 MG214783_p14 hypothetical protein singleton unknown function unknown function 1 3594 4025
ATS92098.1 MG214783_p53 hypothetical protein singleton unknown function unknown function -1 30069 30623
ATS92175.1 MG214783_p35 hypothetical protein singleton unknown function unknown function 1 16078 16239
ATS92125.1 MG214783_p80 hypothetical protein singleton unknown function unknown function -1 46391 46627
ATS92131.1 MG214783_p87 hypothetical protein singleton unknown function unknown function -1 48925 49128
ATS92183.1 MG214783_p44 tail protein phrog_5616 tail fiber protein tail 1 21347 24139
AVI24638.1 MG214783_p79 hypothetical protein singleton unknown function unknown function 1 46297 46413
ATS92169.1 MG214783_p30 capsid protein phrog_264 major head protein head and packaging 1 13694 14656
ATS92105.1 MG214783_p59 integrase singleton unknown function unknown function -1 34550 35032
ATS92115.1 MG214783_p69 DNA primase phrog_1829 DNA primase DNA, RNA and nucleotide metabolism 1 41077 43335
ATS92178.1 MG214783_p39 hypothetical protein singleton unknown function unknown function 1 17579 17716
ATS92109.1 MG214783_p63 hypothetical protein phrog_2072 unknown function unknown function 1 37303 37650
ATS92101.1 MG214783_p55 hypothetical protein singleton unknown function unknown function -1 31071 31343
ATS92161.2 MG214783_p20 hypothetical protein singleton unknown function unknown function 1 6899 7249
ATS92096.2 MG214783_p49 chitinase-like protein phrog_14712 chitinase moron, auxiliary metabolic gene and host takeover 1 28254 29288
ATS92137.1 MG214783_p93 hypothetical protein singleton unknown function unknown function -1 50570 50806
ATS92128.2 MG214783_p84 hypothetical protein phrog_799 DNA methyltransferase other -1 47747 48259
ATS92112.1 MG214783_p66 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 39603 40106
ATS92142.1 MG214783_p1 hypothetical protein singleton unknown function unknown function 1 1 786
ATS92149.1 MG214783_p8 hypothetical protein singleton unknown function unknown function 1 1933 2118
ATS92186.2 MG214783_p47 hypothetical protein singleton unknown function unknown function 1 25891 26082
ATS92130.1 MG214783_p86 hypothetical protein singleton unknown function unknown function -1 48578 48838
ATS92168.1 MG214783_p29 hypothetical protein phrog_563 virion structural protein head and packaging 1 13196 13663
ATS92146.1 MG214783_p5 hypothetical protein singleton unknown function unknown function 1 1358 1555
ATS92123.1 MG214783_p77 hypothetical protein singleton unknown function unknown function -1 45739 46128
ATS92117.2 MG214783_p71 hypothetical protein phrog_27218 unknown function unknown function -1 43634 44374
ATS92159.1 MG214783_p18 terminase large subunit phrog_2 terminase large subunit head and packaging 1 5022 6695
ATS92185.2 MG214783_p46 hypothetical protein phrog_21060 unknown function unknown function 1 24385 25884
ATS92145.1 MG214783_p4 hypothetical protein singleton unknown function unknown function 1 1212 1361
ATS92135.1 MG214783_p91 hypothetical protein phrog_17551 unknown function unknown function -1 50125 50316
AVI24637.1 MG214783_p51 hypothetical protein singleton unknown function unknown function 1 29426 29650
ATS92116.1 MG214783_p70 hypothetical protein singleton unknown function unknown function -1 43358 43558
ATS92124.1 MG214783_p78 hypothetical protein singleton unknown function unknown function -1 46154 46294
ATS92165.1 MG214783_p25 head morphogenesis protein phrog_324 head morphogenesis head and packaging 1 10411 11229
ATS92106.1 MG214783_p60 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 35029 36132
ATS92103.1 MG214783_p57 hypothetical protein singleton unknown function unknown function -1 33327 33458
ATS92170.1 MG214783_p31 hypothetical protein singleton unknown function unknown function 1 14824 15102
ATS92151.1 MG214783_p9 ATP dependent helicase singleton unknown function unknown function 1 2115 2285
ATS92173.1 MG214783_p34 hypothetical protein singleton unknown function unknown function 1 15906 16088
ATS92154.1 MG214783_p13 hypothetical protein singleton unknown function unknown function 1 3376 3597
ATS92176.1 MG214783_p37 hypothetical protein phrog_13196 major tail protein tail 1 16679 17128
ATS92104.1 MG214783_p58 hypothetical protein phrog_7011 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 33592 34557
ATS92138.1 MG214783_p94 hypothetical protein singleton unknown function unknown function -1 50812 50997
AVI24635.1 MG214783_p27 hypothetical protein singleton unknown function unknown function 1 11784 11903
ATS92120.1 MG214783_p74 hypothetical protein singleton unknown function unknown function -1 45061 45192
ATS92160.2 MG214783_p19 hypothetical protein singleton unknown function unknown function 1 6775 6933
ATS92166.1 MG214783_p26 tail assembly protein phrog_5 tail completion or Neck1 protein connector 1 11279 11695
AVI24636.1 MG214783_p48 tail protein phrog_24607 tail protein tail 1 26066 28228
ATS92126.1 MG214783_p82 hypothetical protein singleton unknown function unknown function -1 47020 47550
ATS92172.2 MG214783_p33 hypothetical protein phrog_161 head closure Hc1 connector 1 15544 15906
ATS92153.1 MG214783_p12 hypothetical protein singleton unknown function unknown function 1 3203 3373
ATS92179.1 MG214783_p40 hypothetical protein phrog_8892 tail length tape measure protein tail 1 17721 19724
ATS92133.1 MG214783_p88 hypothetical protein singleton unknown function unknown function -1 49232 49390
ATS92113.1 MG214783_p67 hypothetical protein singleton unknown function unknown function 1 40079 40333