Genomic map of Pseudomonas phage PMBT3 (MG596799)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG596799
Definition
Pseudomonas phage PMBT3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Maxrubnervirus; Pseudomonas virus PMBT3.
DB of origin
NUCCORE
Length
87196
Host Name
Pseudomonas fluorescens
Host domain
Bacteria
Is prophage?
undef
Number of proteins
116
%GC
60.36
Number of singletons
74
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUM59718.1 MG596799_p116 hypothetical protein singleton unknown function unknown function 1 86726 87190
AUM59629.1 MG596799_p27 lysozyme phrog_181 endolysin lysis 1 29223 29765
AUM59625.1 MG596799_p23 peptidoglycan hydrolase singleton unknown function unknown function 1 24770 27826
AUM59656.1 MG596799_p54 SWF/SNF family helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 50026 51741
AUM59706.1 MG596799_p104 hypothetical protein singleton unknown function unknown function -1 76916 77446
AUM59667.1 MG596799_p65 hypothetical protein singleton unknown function unknown function -1 59448 59852
AUM59609.1 MG596799_p7 GTP cyclohydrolase I singleton unknown function unknown function 1 7155 7640
AUM59712.1 MG596799_p110 hypothetical protein singleton unknown function unknown function -1 81329 82096
AUM59633.1 MG596799_p31 hypothetical protein phrog_4757 unknown function unknown function 1 30949 31443
AUM59645.1 MG596799_p43 hypothetical protein phrog_37986 Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 40507 41028
AUM59628.1 MG596799_p26 hypothetical protein singleton unknown function unknown function 1 29039 29233
AUM59672.1 MG596799_p70 hypothetical protein singleton unknown function unknown function -1 61676 61960
AUM59701.1 MG596799_p99 hypothetical protein singleton unknown function unknown function -1 74110 74649
AUM59651.1 MG596799_p49 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 46704 47393
AUM59647.1 MG596799_p45 DNA polymerase III epsilon subunit phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 41627 42373
AUM59657.1 MG596799_p55 hypothetical protein phrog_54 DksA-like zinc-finger protein other -1 51741 51968
AUM59630.1 MG596799_p28 hypothetical protein phrog_312 Rz-like spanin lysis 1 29765 30298
AUM59660.1 MG596799_p58 DNA helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism -1 55131 56459
AUM59635.1 MG596799_p33 hypothetical protein phrog_4245 unknown function unknown function 1 32931 33584
AUM59673.1 MG596799_p71 hypothetical protein singleton unknown function unknown function -1 61938 62282
AUM59610.1 MG596799_p8 hypothetical protein singleton unknown function unknown function 1 7637 8548
AUM59649.1 MG596799_p47 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 42734 46384
AUM59714.1 MG596799_p112 hypothetical protein singleton unknown function unknown function 1 83980 84138
AUM59658.1 MG596799_p56 RNA polymerase-binding transcription factor singleton unknown function unknown function -1 51965 54856
AUM59688.1 MG596799_p86 hypothetical protein singleton unknown function unknown function -1 69381 69749
AUM59614.1 MG596799_p12 hypothetical protein singleton unknown function unknown function 1 10640 11089
AUM59627.1 MG596799_p25 hypothetical protein singleton unknown function unknown function 1 28774 28926
AUM59661.1 MG596799_p59 hypothetical protein singleton unknown function unknown function -1 56524 56850
AUM59642.1 MG596799_p40 hypothetical protein phrog_4856 nucleoside triphosphate pyrophosphohydrolase other -1 37626 38198
AUM59603.1 MG596799_p1 terminase large subunit phrog_675 terminase large subunit head and packaging 1 1 1785
AUM59662.1 MG596799_p60 DNA polymerase A phrog_15487 DNA polymerase DNA, RNA and nucleotide metabolism -1 56886 57689
AUM59693.1 MG596799_p91 hypothetical protein singleton unknown function unknown function -1 70827 70946
AUM59666.1 MG596799_p64 hypothetical protein singleton unknown function unknown function -1 58861 59445
AUM59678.1 MG596799_p76 hypothetical protein singleton unknown function unknown function -1 66163 66507
AUM59617.1 MG596799_p15 minor tail protein phrog_14 minor tail protein tail 1 16638 16985
AUM59686.1 MG596799_p84 hypothetical protein phrog_5162 unknown function unknown function -1 68472 69143
AUM59659.1 MG596799_p57 hypothetical protein singleton unknown function unknown function -1 54860 55105
AUM59707.1 MG596799_p105 hypothetical protein singleton unknown function unknown function -1 77456 78712
AUM59664.1 MG596799_p62 hypothetical protein singleton unknown function unknown function -1 58069 58503
AUM59700.1 MG596799_p98 hypothetical protein singleton unknown function unknown function -1 73598 74110
AUM59668.1 MG596799_p66 hypothetical protein singleton unknown function unknown function -1 59861 60319
AUM59691.1 MG596799_p89 hypothetical protein singleton unknown function unknown function -1 70181 70486
AUM59632.1 MG596799_p30 hypothetical protein singleton unknown function unknown function 1 30653 30949
AUM59671.1 MG596799_p69 hypothetical protein singleton unknown function unknown function -1 61053 61679
AUM59620.1 MG596799_p18 tail assembly protein I phrog_32 tail assembly protein tail 1 18456 19049
AUM59622.1 MG596799_p20 hypothetical protein singleton unknown function unknown function 1 22699 23049
AUM59631.1 MG596799_p29 hypothetical protein phrog_1627 unknown function unknown function 1 30348 30656
AUM59626.1 MG596799_p24 hypothetical protein phrog_4245 unknown function unknown function 1 27921 28433
AUM59611.1 MG596799_p9 hypothetical protein singleton unknown function unknown function 1 8548 9054
AUM59615.1 MG596799_p13 hypothetical protein singleton unknown function unknown function 1 11278 11448
AUM59669.1 MG596799_p67 hypothetical protein singleton unknown function unknown function -1 60306 60758
AUM59716.1 MG596799_p114 integration host factor subunit beta phrog_379 DNA binding protein DNA, RNA and nucleotide metabolism 1 85843 86133
AUM59704.1 MG596799_p102 hypothetical protein singleton unknown function unknown function -1 75263 75658
AUM59697.1 MG596799_p95 hypothetical protein singleton unknown function unknown function -1 72378 72530
AUM59689.1 MG596799_p87 hypothetical protein singleton unknown function unknown function -1 69749 69976
AUM59685.1 MG596799_p83 hypothetical protein singleton unknown function unknown function -1 68284 68475
AUM59608.1 MG596799_p6 CRISPR-associated protein singleton unknown function unknown function 1 6632 7144
AUM59607.1 MG596799_p5 hypothetical protein phrog_3922 major head protein head and packaging 1 5401 6579
AUM59682.1 MG596799_p80 hypothetical protein singleton unknown function unknown function -1 67302 67598
AUM59641.1 MG596799_p39 hypothetical protein singleton unknown function unknown function -1 37240 37629
AUM59623.1 MG596799_p21 hypothetical protein phrog_3370 unknown function unknown function 1 23059 23928
AUM59683.1 MG596799_p81 hypothetical protein singleton unknown function unknown function -1 67595 67921
AUM59702.1 MG596799_p100 hypothetical protein singleton unknown function unknown function -1 74646 74963
AUM59696.1 MG596799_p94 hypothetical protein phrog_7247 unknown function unknown function -1 71416 72381
AUM59698.1 MG596799_p96 DNA binding regulator singleton unknown function unknown function -1 72714 73121
AUM59654.1 MG596799_p52 nucleotide pyrophosphohydrolase phrog_229 MazG-like pyrophosphatase other -1 48229 48855
AUM59644.1 MG596799_p42 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 39319 40473
AUM59655.1 MG596799_p53 hypothetical protein singleton unknown function unknown function -1 48928 49899
AUM59612.1 MG596799_p10 hypothetical protein singleton unknown function unknown function 1 9051 9503
AUM59638.1 MG596799_p36 hypothetical protein singleton unknown function unknown function -1 34406 34672
AUM59676.1 MG596799_p74 hypothetical protein singleton unknown function unknown function -1 65569 65919
AUM59717.1 MG596799_p115 hypothetical protein singleton unknown function unknown function 1 86133 86729
AUM59715.1 MG596799_p113 hypothetical protein singleton unknown function unknown function 1 84131 85060
AUM59604.1 MG596799_p2 hypothetical protein phrog_3753 portal protein head and packaging 1 1910 3382
AUM59643.1 MG596799_p41 DNA repair exonuclease SbcCD nuclease subunit phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 38195 39268
AUM59695.1 MG596799_p93 hypothetical protein singleton unknown function unknown function -1 71168 71419
AUM59606.1 MG596799_p4 hypothetical protein singleton unknown function unknown function 1 4903 5361
AUM59652.1 MG596799_p50 tellurite resistance protein phrog_632 tellurite resistance moron, auxiliary metabolic gene and host takeover -1 47451 47903
AUM59677.1 MG596799_p75 hypothetical protein singleton unknown function unknown function -1 65993 66166
AUM59653.1 MG596799_p51 hypothetical protein phrog_16275 unknown function unknown function -1 47960 48226
AUM59681.1 MG596799_p79 hypothetical protein phrog_3034 unknown function unknown function -1 67022 67315
AUM59605.1 MG596799_p3 signal peptide peptidase phrog_33023 unknown function unknown function 1 3394 4890
AUM59708.1 MG596799_p106 hypothetical protein singleton unknown function unknown function 1 79526 79771
AUM59684.1 MG596799_p82 hypothetical protein singleton unknown function unknown function -1 67932 68126
AUM59648.1 MG596799_p46 hypothetical protein singleton unknown function unknown function -1 42370 42753
AUM59639.1 MG596799_p37 hypothetical protein singleton unknown function unknown function -1 34675 34917
AUM59713.1 MG596799_p111 hypothetical protein phrog_6978 unknown function unknown function 1 83000 83848
AUM59710.1 MG596799_p108 portal protein singleton unknown function unknown function -1 80315 80788
AUM59705.1 MG596799_p103 hypothetical protein singleton unknown function unknown function -1 75651 76910
AUM59680.1 MG596799_p78 hypothetical protein singleton unknown function unknown function -1 66841 67032
AUM59692.1 MG596799_p90 hypothetical protein singleton unknown function unknown function -1 70486 70827
AUM59618.1 MG596799_p16 minor tail protein phrog_18 minor tail protein tail 1 17024 17725
AUM59624.1 MG596799_p22 hypothetical protein singleton unknown function unknown function 1 23942 24760
AUM59690.1 MG596799_p88 hypothetical protein phrog_4276 unknown function unknown function -1 69958 70203
AUM59613.1 MG596799_p11 hypothetical protein singleton unknown function unknown function 1 9509 10558
AUM59665.1 MG596799_p63 hypothetical protein singleton unknown function unknown function -1 58500 58832
AUM59703.1 MG596799_p101 hypothetical protein singleton unknown function unknown function -1 74953 75261
AUM59663.1 MG596799_p61 hypothetical protein singleton unknown function unknown function -1 57689 58051
AUM59634.1 MG596799_p32 hypothetical protein phrog_20194 unknown function unknown function 1 31447 32934
AUM59679.1 MG596799_p77 hypothetical protein singleton unknown function unknown function -1 66500 66649
AUM59694.1 MG596799_p92 hypothetical protein singleton unknown function unknown function -1 70936 71166
AUM59699.1 MG596799_p97 hypothetical protein singleton unknown function unknown function -1 73108 73635
AUM59621.1 MG596799_p19 tail fiber protein phrog_31 central tail fiber J tail 1 19046 22699
AUM59640.1 MG596799_p38 DNA repair exonuclease phrog_28217 DNA repair exonuclease DNA, RNA and nucleotide metabolism -1 34919 37204
AUM59711.1 MG596799_p109 hypothetical protein singleton unknown function unknown function -1 80983 81273
AUM59619.1 MG596799_p17 tail assembly protein phrog_30 minor tail protein tail 1 17725 18459
AUM59616.1 MG596799_p14 tape measure protein phrog_28 tail length tape measure protein tail 1 11451 16634
AUM59709.1 MG596799_p107 hypothetical protein singleton unknown function unknown function -1 79931 80311
AUM59650.1 MG596799_p48 hypothetical protein phrog_3848 unknown function unknown function -1 46387 46692
AUM59675.1 MG596799_p73 DNA cytosine methylasetransferase phrog_116 DNA methyltransferase other -1 63470 65533
AUM59670.1 MG596799_p68 hypothetical protein singleton unknown function unknown function -1 60758 61066
AUM59687.1 MG596799_p85 hypothetical protein singleton unknown function unknown function -1 69211 69381
AUM59674.1 MG596799_p72 chromosome segregation domain protein singleton unknown function unknown function -1 62270 63460
AUM59646.1 MG596799_p44 deoxynucleotide monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other -1 41028 41630
AUM59636.1 MG596799_p34 hypothetical protein singleton unknown function unknown function -1 33647 33925
AUM59637.1 MG596799_p35 hypothetical protein singleton unknown function unknown function -1 33922 34419