| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG596799 |
Definition |
Pseudomonas phage PMBT3, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Maxrubnervirus; Pseudomonas virus PMBT3. |
DB of origin |
NUCCORE |
Length |
87196 |
Host Name |
Pseudomonas fluorescens |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
116 |
%GC |
60.36 |
Number of singletons |
74 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUM59718.1 | MG596799_p116 | hypothetical protein | singleton | unknown function | unknown function | 1 | 86726 | 87190 |
| AUM59629.1 | MG596799_p27 | lysozyme | phrog_181 | endolysin | lysis | 1 | 29223 | 29765 |
| AUM59625.1 | MG596799_p23 | peptidoglycan hydrolase | singleton | unknown function | unknown function | 1 | 24770 | 27826 |
| AUM59656.1 | MG596799_p54 | SWF/SNF family helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 50026 | 51741 |
| AUM59706.1 | MG596799_p104 | hypothetical protein | singleton | unknown function | unknown function | -1 | 76916 | 77446 |
| AUM59667.1 | MG596799_p65 | hypothetical protein | singleton | unknown function | unknown function | -1 | 59448 | 59852 |
| AUM59609.1 | MG596799_p7 | GTP cyclohydrolase I | singleton | unknown function | unknown function | 1 | 7155 | 7640 |
| AUM59712.1 | MG596799_p110 | hypothetical protein | singleton | unknown function | unknown function | -1 | 81329 | 82096 |
| AUM59633.1 | MG596799_p31 | hypothetical protein | phrog_4757 | unknown function | unknown function | 1 | 30949 | 31443 |
| AUM59645.1 | MG596799_p43 | hypothetical protein | phrog_37986 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 40507 | 41028 |
| AUM59628.1 | MG596799_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29039 | 29233 |
| AUM59672.1 | MG596799_p70 | hypothetical protein | singleton | unknown function | unknown function | -1 | 61676 | 61960 |
| AUM59701.1 | MG596799_p99 | hypothetical protein | singleton | unknown function | unknown function | -1 | 74110 | 74649 |
| AUM59651.1 | MG596799_p49 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 46704 | 47393 |
| AUM59647.1 | MG596799_p45 | DNA polymerase III epsilon subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 41627 | 42373 |
| AUM59657.1 | MG596799_p55 | hypothetical protein | phrog_54 | DksA-like zinc-finger protein | other | -1 | 51741 | 51968 |
| AUM59630.1 | MG596799_p28 | hypothetical protein | phrog_312 | Rz-like spanin | lysis | 1 | 29765 | 30298 |
| AUM59660.1 | MG596799_p58 | DNA helicase | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | -1 | 55131 | 56459 |
| AUM59635.1 | MG596799_p33 | hypothetical protein | phrog_4245 | unknown function | unknown function | 1 | 32931 | 33584 |
| AUM59673.1 | MG596799_p71 | hypothetical protein | singleton | unknown function | unknown function | -1 | 61938 | 62282 |
| AUM59610.1 | MG596799_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7637 | 8548 |
| AUM59649.1 | MG596799_p47 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 42734 | 46384 |
| AUM59714.1 | MG596799_p112 | hypothetical protein | singleton | unknown function | unknown function | 1 | 83980 | 84138 |
| AUM59658.1 | MG596799_p56 | RNA polymerase-binding transcription factor | singleton | unknown function | unknown function | -1 | 51965 | 54856 |
| AUM59688.1 | MG596799_p86 | hypothetical protein | singleton | unknown function | unknown function | -1 | 69381 | 69749 |
| AUM59614.1 | MG596799_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10640 | 11089 |
| AUM59627.1 | MG596799_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28774 | 28926 |
| AUM59661.1 | MG596799_p59 | hypothetical protein | singleton | unknown function | unknown function | -1 | 56524 | 56850 |
| AUM59642.1 | MG596799_p40 | hypothetical protein | phrog_4856 | nucleoside triphosphate pyrophosphohydrolase | other | -1 | 37626 | 38198 |
| AUM59603.1 | MG596799_p1 | terminase large subunit | phrog_675 | terminase large subunit | head and packaging | 1 | 1 | 1785 |
| AUM59662.1 | MG596799_p60 | DNA polymerase A | phrog_15487 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 56886 | 57689 |
| AUM59693.1 | MG596799_p91 | hypothetical protein | singleton | unknown function | unknown function | -1 | 70827 | 70946 |
| AUM59666.1 | MG596799_p64 | hypothetical protein | singleton | unknown function | unknown function | -1 | 58861 | 59445 |
| AUM59678.1 | MG596799_p76 | hypothetical protein | singleton | unknown function | unknown function | -1 | 66163 | 66507 |
| AUM59617.1 | MG596799_p15 | minor tail protein | phrog_14 | minor tail protein | tail | 1 | 16638 | 16985 |
| AUM59686.1 | MG596799_p84 | hypothetical protein | phrog_5162 | unknown function | unknown function | -1 | 68472 | 69143 |
| AUM59659.1 | MG596799_p57 | hypothetical protein | singleton | unknown function | unknown function | -1 | 54860 | 55105 |
| AUM59707.1 | MG596799_p105 | hypothetical protein | singleton | unknown function | unknown function | -1 | 77456 | 78712 |
| AUM59664.1 | MG596799_p62 | hypothetical protein | singleton | unknown function | unknown function | -1 | 58069 | 58503 |
| AUM59700.1 | MG596799_p98 | hypothetical protein | singleton | unknown function | unknown function | -1 | 73598 | 74110 |
| AUM59668.1 | MG596799_p66 | hypothetical protein | singleton | unknown function | unknown function | -1 | 59861 | 60319 |
| AUM59691.1 | MG596799_p89 | hypothetical protein | singleton | unknown function | unknown function | -1 | 70181 | 70486 |
| AUM59632.1 | MG596799_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30653 | 30949 |
| AUM59671.1 | MG596799_p69 | hypothetical protein | singleton | unknown function | unknown function | -1 | 61053 | 61679 |
| AUM59620.1 | MG596799_p18 | tail assembly protein I | phrog_32 | tail assembly protein | tail | 1 | 18456 | 19049 |
| AUM59622.1 | MG596799_p20 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22699 | 23049 |
| AUM59631.1 | MG596799_p29 | hypothetical protein | phrog_1627 | unknown function | unknown function | 1 | 30348 | 30656 |
| AUM59626.1 | MG596799_p24 | hypothetical protein | phrog_4245 | unknown function | unknown function | 1 | 27921 | 28433 |
| AUM59611.1 | MG596799_p9 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8548 | 9054 |
| AUM59615.1 | MG596799_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11278 | 11448 |
| AUM59669.1 | MG596799_p67 | hypothetical protein | singleton | unknown function | unknown function | -1 | 60306 | 60758 |
| AUM59716.1 | MG596799_p114 | integration host factor subunit beta | phrog_379 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 85843 | 86133 |
| AUM59704.1 | MG596799_p102 | hypothetical protein | singleton | unknown function | unknown function | -1 | 75263 | 75658 |
| AUM59697.1 | MG596799_p95 | hypothetical protein | singleton | unknown function | unknown function | -1 | 72378 | 72530 |
| AUM59689.1 | MG596799_p87 | hypothetical protein | singleton | unknown function | unknown function | -1 | 69749 | 69976 |
| AUM59685.1 | MG596799_p83 | hypothetical protein | singleton | unknown function | unknown function | -1 | 68284 | 68475 |
| AUM59608.1 | MG596799_p6 | CRISPR-associated protein | singleton | unknown function | unknown function | 1 | 6632 | 7144 |
| AUM59607.1 | MG596799_p5 | hypothetical protein | phrog_3922 | major head protein | head and packaging | 1 | 5401 | 6579 |
| AUM59682.1 | MG596799_p80 | hypothetical protein | singleton | unknown function | unknown function | -1 | 67302 | 67598 |
| AUM59641.1 | MG596799_p39 | hypothetical protein | singleton | unknown function | unknown function | -1 | 37240 | 37629 |
| AUM59623.1 | MG596799_p21 | hypothetical protein | phrog_3370 | unknown function | unknown function | 1 | 23059 | 23928 |
| AUM59683.1 | MG596799_p81 | hypothetical protein | singleton | unknown function | unknown function | -1 | 67595 | 67921 |
| AUM59702.1 | MG596799_p100 | hypothetical protein | singleton | unknown function | unknown function | -1 | 74646 | 74963 |
| AUM59696.1 | MG596799_p94 | hypothetical protein | phrog_7247 | unknown function | unknown function | -1 | 71416 | 72381 |
| AUM59698.1 | MG596799_p96 | DNA binding regulator | singleton | unknown function | unknown function | -1 | 72714 | 73121 |
| AUM59654.1 | MG596799_p52 | nucleotide pyrophosphohydrolase | phrog_229 | MazG-like pyrophosphatase | other | -1 | 48229 | 48855 |
| AUM59644.1 | MG596799_p42 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 39319 | 40473 |
| AUM59655.1 | MG596799_p53 | hypothetical protein | singleton | unknown function | unknown function | -1 | 48928 | 49899 |
| AUM59612.1 | MG596799_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9051 | 9503 |
| AUM59638.1 | MG596799_p36 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34406 | 34672 |
| AUM59676.1 | MG596799_p74 | hypothetical protein | singleton | unknown function | unknown function | -1 | 65569 | 65919 |
| AUM59717.1 | MG596799_p115 | hypothetical protein | singleton | unknown function | unknown function | 1 | 86133 | 86729 |
| AUM59715.1 | MG596799_p113 | hypothetical protein | singleton | unknown function | unknown function | 1 | 84131 | 85060 |
| AUM59604.1 | MG596799_p2 | hypothetical protein | phrog_3753 | portal protein | head and packaging | 1 | 1910 | 3382 |
| AUM59643.1 | MG596799_p41 | DNA repair exonuclease SbcCD nuclease subunit | phrog_100 | SbcD-like subunit of palindrome specific endonuclease | DNA, RNA and nucleotide metabolism | -1 | 38195 | 39268 |
| AUM59695.1 | MG596799_p93 | hypothetical protein | singleton | unknown function | unknown function | -1 | 71168 | 71419 |
| AUM59606.1 | MG596799_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4903 | 5361 |
| AUM59652.1 | MG596799_p50 | tellurite resistance protein | phrog_632 | tellurite resistance | moron, auxiliary metabolic gene and host takeover | -1 | 47451 | 47903 |
| AUM59677.1 | MG596799_p75 | hypothetical protein | singleton | unknown function | unknown function | -1 | 65993 | 66166 |
| AUM59653.1 | MG596799_p51 | hypothetical protein | phrog_16275 | unknown function | unknown function | -1 | 47960 | 48226 |
| AUM59681.1 | MG596799_p79 | hypothetical protein | phrog_3034 | unknown function | unknown function | -1 | 67022 | 67315 |
| AUM59605.1 | MG596799_p3 | signal peptide peptidase | phrog_33023 | unknown function | unknown function | 1 | 3394 | 4890 |
| AUM59708.1 | MG596799_p106 | hypothetical protein | singleton | unknown function | unknown function | 1 | 79526 | 79771 |
| AUM59684.1 | MG596799_p82 | hypothetical protein | singleton | unknown function | unknown function | -1 | 67932 | 68126 |
| AUM59648.1 | MG596799_p46 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42370 | 42753 |
| AUM59639.1 | MG596799_p37 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34675 | 34917 |
| AUM59713.1 | MG596799_p111 | hypothetical protein | phrog_6978 | unknown function | unknown function | 1 | 83000 | 83848 |
| AUM59710.1 | MG596799_p108 | portal protein | singleton | unknown function | unknown function | -1 | 80315 | 80788 |
| AUM59705.1 | MG596799_p103 | hypothetical protein | singleton | unknown function | unknown function | -1 | 75651 | 76910 |
| AUM59680.1 | MG596799_p78 | hypothetical protein | singleton | unknown function | unknown function | -1 | 66841 | 67032 |
| AUM59692.1 | MG596799_p90 | hypothetical protein | singleton | unknown function | unknown function | -1 | 70486 | 70827 |
| AUM59618.1 | MG596799_p16 | minor tail protein | phrog_18 | minor tail protein | tail | 1 | 17024 | 17725 |
| AUM59624.1 | MG596799_p22 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23942 | 24760 |
| AUM59690.1 | MG596799_p88 | hypothetical protein | phrog_4276 | unknown function | unknown function | -1 | 69958 | 70203 |
| AUM59613.1 | MG596799_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9509 | 10558 |
| AUM59665.1 | MG596799_p63 | hypothetical protein | singleton | unknown function | unknown function | -1 | 58500 | 58832 |
| AUM59703.1 | MG596799_p101 | hypothetical protein | singleton | unknown function | unknown function | -1 | 74953 | 75261 |
| AUM59663.1 | MG596799_p61 | hypothetical protein | singleton | unknown function | unknown function | -1 | 57689 | 58051 |
| AUM59634.1 | MG596799_p32 | hypothetical protein | phrog_20194 | unknown function | unknown function | 1 | 31447 | 32934 |
| AUM59679.1 | MG596799_p77 | hypothetical protein | singleton | unknown function | unknown function | -1 | 66500 | 66649 |
| AUM59694.1 | MG596799_p92 | hypothetical protein | singleton | unknown function | unknown function | -1 | 70936 | 71166 |
| AUM59699.1 | MG596799_p97 | hypothetical protein | singleton | unknown function | unknown function | -1 | 73108 | 73635 |
| AUM59621.1 | MG596799_p19 | tail fiber protein | phrog_31 | central tail fiber J | tail | 1 | 19046 | 22699 |
| AUM59640.1 | MG596799_p38 | DNA repair exonuclease | phrog_28217 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | -1 | 34919 | 37204 |
| AUM59711.1 | MG596799_p109 | hypothetical protein | singleton | unknown function | unknown function | -1 | 80983 | 81273 |
| AUM59619.1 | MG596799_p17 | tail assembly protein | phrog_30 | minor tail protein | tail | 1 | 17725 | 18459 |
| AUM59616.1 | MG596799_p14 | tape measure protein | phrog_28 | tail length tape measure protein | tail | 1 | 11451 | 16634 |
| AUM59709.1 | MG596799_p107 | hypothetical protein | singleton | unknown function | unknown function | -1 | 79931 | 80311 |
| AUM59650.1 | MG596799_p48 | hypothetical protein | phrog_3848 | unknown function | unknown function | -1 | 46387 | 46692 |
| AUM59675.1 | MG596799_p73 | DNA cytosine methylasetransferase | phrog_116 | DNA methyltransferase | other | -1 | 63470 | 65533 |
| AUM59670.1 | MG596799_p68 | hypothetical protein | singleton | unknown function | unknown function | -1 | 60758 | 61066 |
| AUM59687.1 | MG596799_p85 | hypothetical protein | singleton | unknown function | unknown function | -1 | 69211 | 69381 |
| AUM59674.1 | MG596799_p72 | chromosome segregation domain protein | singleton | unknown function | unknown function | -1 | 62270 | 63460 |
| AUM59646.1 | MG596799_p44 | deoxynucleotide monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 41028 | 41630 |
| AUM59636.1 | MG596799_p34 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33647 | 33925 |
| AUM59637.1 | MG596799_p35 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33922 | 34419 |