Genomic map of Vibrio phage Vp_R1 (MG603697)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG603697
Definition
Vibrio phage Vp_R1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
NUCCORE
Length
112127
Host Name
Vibrio parahaemolyticus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
147
%GC
40.32
Number of singletons
84
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUG88508.1 MG603697_p144 hypothetical protein singleton unknown function unknown function -1 107868 108422
AUG88417.1 MG603697_p53 hypothetical protein singleton unknown function unknown function -1 22047 22268
AUG88477.1 MG603697_p113 hypothetical protein phrog_20917 unknown function unknown function 1 71920 73158
AUG88467.1 MG603697_p103 hypothetical protein singleton unknown function unknown function -1 59775 60395
AUG88489.1 MG603697_p125 hypothetical protein phrog_22201 tail fiber protein tail 1 86731 89031
AUG88420.1 MG603697_p56 hypothetical protein singleton unknown function unknown function -1 22790 23167
AUG88406.1 MG603697_p42 hypothetical protein singleton unknown function unknown function -1 17214 17366
AUG88493.1 MG603697_p129 hypothetical protein singleton unknown function unknown function 1 91034 91453
AUG88503.1 MG603697_p139 hypothetical protein phrog_1740 RNA polymerase sigma factor transcription regulation -1 104874 105521
AUG88428.1 MG603697_p64 hypothetical protein phrog_2599 ribosomal protein S6 glutaminyl transferase moron, auxiliary metabolic gene and host takeover -1 25390 27642
AUG88422.1 MG603697_p58 hypothetical protein singleton unknown function unknown function -1 23757 23996
AUG88440.1 MG603697_p76 hypothetical protein phrog_33532 unknown function unknown function -1 34637 35119
AUG88367.1 MG603697_p3 hypothetical protein singleton unknown function unknown function -1 520 912
AUG88371.1 MG603697_p7 hypothetical protein singleton unknown function unknown function -1 1580 1747
AUG88504.1 MG603697_p140 hypothetical protein phrog_7775 unknown function unknown function -1 105544 105798
AUG88464.1 MG603697_p100 hypothetical protein singleton unknown function unknown function -1 57745 58008
AUG88372.1 MG603697_p8 hypothetical protein singleton unknown function unknown function -1 1741 1950
AUG88419.1 MG603697_p55 hypothetical protein singleton unknown function unknown function -1 22569 22790
AUG88421.1 MG603697_p57 hypothetical protein singleton unknown function unknown function -1 23537 23740
AUG88458.1 MG603697_p94 hypothetical protein phrog_16959 unknown function unknown function -1 52782 53381
AUG88470.1 MG603697_p106 hypothetical protein phrog_894 endolysin lysis 1 63252 63620
AUG88385.1 MG603697_p21 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 8386 9339
AUG88384.1 MG603697_p20 hypothetical protein singleton unknown function unknown function -1 8074 8262
AUG88457.1 MG603697_p93 hypothetical protein phrog_1843 unknown function unknown function -1 51334 51861
AUG88453.1 MG603697_p89 hypothetical protein singleton unknown function unknown function -1 45823 46605
AUG88404.1 MG603697_p40 nicotinamide phosphoribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other -1 15325 16890
AUG88409.1 MG603697_p45 hypothetical protein singleton unknown function unknown function 1 17931 18113
AUG88459.1 MG603697_p95 hypothetical protein phrog_4518 unknown function unknown function -1 53381 53950
AUG88402.1 MG603697_p38 hypothetical protein singleton unknown function unknown function -1 14793 14927
AUG88465.1 MG603697_p101 hypothetical protein singleton unknown function unknown function -1 58273 58524
AUG88387.1 MG603697_p23 hypothetical protein singleton unknown function unknown function -1 9615 9842
AUG88398.1 MG603697_p34 hypothetical protein singleton unknown function unknown function -1 12986 13237
AUG88476.1 MG603697_p112 hypothetical protein singleton unknown function unknown function 1 70808 71908
AUG88454.1 MG603697_p90 hypothetical protein phrog_17203 unknown function unknown function -1 47417 49609
AUG88446.1 MG603697_p82 hypothetical protein singleton unknown function unknown function -1 40354 40833
AUG88373.1 MG603697_p9 hypothetical protein phrog_1934 unknown function unknown function -1 1953 2345
AUG88461.1 MG603697_p97 hypothetical protein singleton unknown function unknown function -1 54459 54734
AUG88403.1 MG603697_p39 hypothetical protein phrog_37732 unknown function unknown function -1 14966 15328
AUG88432.1 MG603697_p68 hypothetical protein phrog_7631 amidoligase enzyme other -1 29642 30733
AUG88374.1 MG603697_p10 hypothetical protein singleton unknown function unknown function -1 2342 2461
AUG88383.1 MG603697_p19 hypothetical protein singleton unknown function unknown function -1 7947 8081
AUG88393.1 MG603697_p29 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 11260 11913
AUG88511.1 MG603697_p147 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 110532 112043
AUG88414.1 MG603697_p50 DNA polymerase phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 19393 19929
AUG88418.1 MG603697_p54 hypothetical protein singleton unknown function unknown function -1 22265 22519
AUG88509.1 MG603697_p145 hypothetical protein phrog_289 GTP-binding domain other -1 108725 109363
AUG88441.1 MG603697_p77 hypothetical protein singleton unknown function unknown function -1 35287 35550
AUG88501.1 MG603697_p137 hypothetical protein singleton unknown function unknown function -1 103219 103644
AUG88444.1 MG603697_p80 hypothetical protein singleton unknown function unknown function -1 36851 37141
AUG88427.1 MG603697_p63 hypothetical protein phrog_2520 gamma-glutamyl cyclotransferase moron, auxiliary metabolic gene and host takeover -1 24768 25211
AUG88507.1 MG603697_p143 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other -1 107369 107845
AUG88485.1 MG603697_p121 hypothetical protein singleton unknown function unknown function 1 79461 81665
AUG88377.1 MG603697_p13 phosphate starvation-inducible protein phrog_170 PhoH-like phosphate starvation-inducible other -1 3072 3821
AUG88448.1 MG603697_p84 hypothetical protein singleton unknown function unknown function -1 41669 42220
AUG88474.1 MG603697_p110 hypothetical protein phrog_9013 head scaffolding protein head and packaging 1 68594 69694
AUG88505.1 MG603697_p141 hypothetical protein phrog_6599 unknown function unknown function -1 106024 106806
AUG88375.1 MG603697_p11 hypothetical protein singleton unknown function unknown function -1 2493 2693
AUG88500.1 MG603697_p136 hypothetical protein singleton unknown function unknown function -1 102800 103219
AUG88388.1 MG603697_p24 hypothetical protein phrog_13746 unknown function unknown function -1 9842 10192
AUG88415.1 MG603697_p51 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism -1 20011 21801
AUG88463.1 MG603697_p99 hypothetical protein singleton unknown function unknown function -1 56643 56948
AUG88405.1 MG603697_p41 hypothetical protein singleton unknown function unknown function -1 16951 17154
AUG88480.1 MG603697_p116 hypothetical protein singleton unknown function unknown function 1 74305 74640
AUG88490.1 MG603697_p126 hypothetical protein singleton unknown function unknown function 1 89091 89504
AUG88411.1 MG603697_p47 hypothetical protein singleton unknown function unknown function -1 18439 18684
AUG88370.1 MG603697_p6 hypothetical protein singleton unknown function unknown function -1 1382 1537
AUG88381.1 MG603697_p17 hypothetical protein singleton unknown function unknown function -1 7338 7814
AUG88456.1 MG603697_p92 hypothetical protein singleton unknown function unknown function -1 50454 51002
AUG88430.1 MG603697_p66 hypothetical protein phrog_9477 unknown function unknown function -1 27786 28004
AUG88416.1 MG603697_p52 hypothetical protein singleton unknown function unknown function -1 21854 22045
AUG88447.1 MG603697_p83 hypothetical protein singleton unknown function unknown function -1 41216 41569
AUG88445.1 MG603697_p81 hypothetical protein singleton unknown function unknown function -1 39914 40345
AUG88475.1 MG603697_p111 capsid and scaffold protein phrog_1328 major head protein head and packaging 1 69816 70745
AUG88486.1 MG603697_p122 hypothetical protein singleton unknown function unknown function 1 81740 84037
AUG88423.1 MG603697_p59 hypothetical protein singleton unknown function unknown function -1 23986 24225
AUG88399.1 MG603697_p35 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other -1 13224 13682
AUG88431.1 MG603697_p67 hypothetical protein phrog_4736 L-glutamine-D-fructose-6-phosphate aminotransferase other -1 27997 29625
AUG88462.1 MG603697_p98 hypothetical protein singleton unknown function unknown function -1 56140 56382
AUG88390.1 MG603697_p26 hypothetical protein singleton unknown function unknown function -1 10447 10719
AUG88496.1 MG603697_p132 3'-phosphatase, 5'-polynucleotide kinase phrog_415 polynucleotide kinase other -1 100463 100999
AUG88365.1 MG603697_p1 hypothetical protein singleton unknown function unknown function -1 106 357
AUG88380.1 MG603697_p16 ribonucleotide reductase of class Ia (aerobic), alpha subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 5557 7326
AUG88391.1 MG603697_p27 hypothetical protein phrog_3715 unknown function unknown function -1 10768 10998
AUG88478.1 MG603697_p114 hypothetical protein phrog_8135 unknown function unknown function 1 73172 73528
AUG88379.1 MG603697_p15 ribonucleotide reductase of class Ia (aerobic), beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism -1 4571 5512
AUG88389.1 MG603697_p25 hypothetical protein phrog_35252 unknown function unknown function -1 10161 10460
AUG88376.1 MG603697_p12 hypothetical protein phrog_4590 unknown function unknown function -1 2755 3060
AUG88455.1 MG603697_p91 hypothetical protein singleton unknown function unknown function -1 49625 50293
AUG88468.1 MG603697_p104 hypothetical protein phrog_8771 unknown function unknown function 1 62427 62807
AUG88497.1 MG603697_p133 hypothetical protein singleton unknown function unknown function -1 101002 101319
AUG88452.1 MG603697_p88 hypothetical protein phrog_200 lipoprotein other -1 44650 45606
AUG88425.1 MG603697_p61 hypothetical protein phrog_16354 unknown function unknown function -1 24355 24558
AUG88426.1 MG603697_p62 hypothetical protein singleton unknown function unknown function -1 24568 24768
AUG88378.1 MG603697_p14 hypothetical protein phrog_1614 nucleotidyltransferase DNA, RNA and nucleotide metabolism -1 3848 4558
AUG88471.1 MG603697_p107 hypothetical protein singleton unknown function unknown function 1 63669 64595
AUG88413.1 MG603697_p49 hypothetical protein singleton unknown function unknown function -1 19202 19396
AUG88472.1 MG603697_p108 terminase large subunit phrog_2 terminase large subunit head and packaging 1 64655 66178
AUG88502.1 MG603697_p138 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 103797 104846
AUG88466.1 MG603697_p102 hypothetical protein singleton unknown function unknown function -1 58705 59697
AUG88492.1 MG603697_p128 hypothetical protein singleton unknown function unknown function 1 90485 91024
AUG88469.1 MG603697_p105 hypothetical protein phrog_858 starvation-inducible transcriptional regulator transcription regulation 1 62807 63238
AUG88483.1 MG603697_p119 hypothetical protein singleton unknown function unknown function 1 78386 78697
AUG88407.1 MG603697_p43 hypothetical protein phrog_944 membrane protein moron, auxiliary metabolic gene and host takeover -1 17359 17769
AUG88408.1 MG603697_p44 hypothetical protein singleton unknown function unknown function -1 17756 17926
AUG88386.1 MG603697_p22 hypothetical protein phrog_14305 unknown function unknown function -1 9476 9622
AUG88438.1 MG603697_p74 hypothetical protein singleton unknown function unknown function -1 34071 34265
AUG88449.1 MG603697_p85 hypothetical protein phrog_13306 unknown function unknown function -1 42221 42454
AUG88369.1 MG603697_p5 hypothetical protein singleton unknown function unknown function -1 1212 1388
AUG88442.1 MG603697_p78 hypothetical protein singleton unknown function unknown function -1 35676 36065
AUG88481.1 MG603697_p117 hypothetical protein singleton unknown function unknown function 1 74650 75474
AUG88429.1 MG603697_p65 hypothetical protein singleton unknown function unknown function -1 27653 27799
AUG88499.1 MG603697_p135 hypothetical protein phrog_221 metallo-phosphoesterase other -1 101970 102734
AUG88368.1 MG603697_p4 hypothetical protein phrog_1247 MazG-like pyrophosphatase other -1 914 1219
AUG88437.1 MG603697_p73 hypothetical protein singleton unknown function unknown function -1 33407 34045
AUG88400.1 MG603697_p36 hypothetical protein singleton unknown function unknown function -1 13675 13947
AUG88436.1 MG603697_p72 hypothetical protein singleton unknown function unknown function -1 32973 33296
AUG88366.1 MG603697_p2 hypothetical protein singleton unknown function unknown function -1 350 538
AUG88395.1 MG603697_p31 hypothetical protein singleton unknown function unknown function -1 12038 12364
AUG88506.1 MG603697_p142 hypothetical protein singleton unknown function unknown function -1 107050 107358
AUG88484.1 MG603697_p120 hypothetical protein singleton unknown function unknown function 1 78832 79452
AUG88434.1 MG603697_p70 hypothetical protein phrog_3815 COOH.NH2 ligase other -1 31295 32035
AUG88473.1 MG603697_p109 portal protein phrog_1216 portal protein head and packaging 1 66194 68356
AUG88510.1 MG603697_p146 hypothetical protein phrog_6254 HNH endonuclease DNA, RNA and nucleotide metabolism -1 110072 110470
AUG88450.1 MG603697_p86 hypothetical protein singleton unknown function unknown function -1 42670 43191
AUG88435.1 MG603697_p71 hypothetical protein phrog_19161 unknown function unknown function -1 32098 32970
AUG88424.1 MG603697_p60 hypothetical protein singleton unknown function unknown function -1 24206 24352
AUG88482.1 MG603697_p118 hypothetical protein phrog_2871 tail protein tail 1 75484 78393
AUG88487.1 MG603697_p123 hypothetical protein phrog_5795 tail protein tail 1 84190 84909
AUG88495.1 MG603697_p131 MJ0042 family finger-like protein singleton unknown function unknown function 1 93054 99698
AUG88488.1 MG603697_p124 hypothetical protein phrog_3287 virion structural protein head and packaging 1 84922 86718
AUG88401.1 MG603697_p37 ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other -1 13991 14830
AUG88410.1 MG603697_p46 hypothetical protein singleton unknown function unknown function -1 18189 18416
AUG88397.1 MG603697_p33 hypothetical protein singleton unknown function unknown function -1 12578 12973
AUG88460.1 MG603697_p96 hypothetical protein singleton unknown function unknown function -1 53950 54255
AUG88392.1 MG603697_p28 hypothetical protein singleton unknown function unknown function -1 11033 11260
AUG88491.1 MG603697_p127 hypothetical protein phrog_4287 DNA ejection protein DNA, RNA and nucleotide metabolism 1 89504 90475
AUG88479.1 MG603697_p115 hypothetical protein phrog_2524 unknown function unknown function 1 73540 73884
AUG88396.1 MG603697_p32 hypothetical protein singleton unknown function unknown function -1 12324 12497
AUG88433.1 MG603697_p69 hypothetical protein phrog_4877 unknown function unknown function -1 30690 31295
AUG88394.1 MG603697_p30 hypothetical protein singleton unknown function unknown function -1 11914 12051
AUG88451.1 MG603697_p87 hypothetical protein phrog_11295 unknown function unknown function -1 43847 44191
AUG88443.1 MG603697_p79 hypothetical protein singleton unknown function unknown function -1 36501 36842
AUG88412.1 MG603697_p48 hypothetical protein phrog_335 phosphatase other -1 18738 19184
AUG88494.1 MG603697_p130 hypothetical protein singleton unknown function unknown function 1 91440 93044
AUG88439.1 MG603697_p75 hypothetical protein singleton unknown function unknown function -1 34388 34621
AUG88498.1 MG603697_p134 hypothetical protein singleton unknown function unknown function -1 101430 101813
AUG88382.1 MG603697_p18 hypothetical protein singleton unknown function unknown function -1 7807 7938