Genomic map of Salmonella phage PMBT28 (MG641885)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG641885
Definition
Salmonella phage PMBT28, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
48113
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
67
%GC
58.61
Number of singletons
27
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUZ95554.1 MG641885_p62 hypothetical protein singleton unknown function unknown function 1 45700 45849
AUZ95519.1 MG641885_p27 ATP-dependent DNA helicase phrog_1967 DNA helicase DNA, RNA and nucleotide metabolism 1 26816 28294
AUZ95555.1 MG641885_p63 terminase small subunit phrog_51 terminase small subunit head and packaging 1 46048 46656
AUZ95546.1 MG641885_p54 hypothetical protein singleton unknown function unknown function 1 42281 42616
AUZ95507.1 MG641885_p15 hypothetical protein phrog_1302 distal tail protein tail 1 12099 12692
AUZ95500.1 MG641885_p8 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 6467 6955
AUZ95510.1 MG641885_p18 tail fiber protein phrog_31 central tail fiber J tail 1 13681 16881
AUZ95513.1 MG641885_p21 hypothetical protein phrog_21866 primase DNA, RNA and nucleotide metabolism 1 21129 22685
AUZ95542.1 MG641885_p50 hypothetical protein singleton unknown function unknown function 1 40880 41113
AUZ95509.1 MG641885_p17 hypothetical protein phrog_2134 unknown function unknown function 1 13266 13679
AUZ95529.1 MG641885_p37 hypothetical protein phrog_1507 unknown function unknown function 1 35333 35674
AUZ95502.1 MG641885_p10 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 7304 7687
AUZ95494.1 MG641885_p2 62kDa structural protein phrog_145 portal protein head and packaging 1 1479 2996
AUZ95534.1 MG641885_p42 hypothetical protein singleton unknown function unknown function 1 37410 37532
AUZ95498.1 MG641885_p6 tail fiber protein singleton unknown function unknown function 1 6094 6276
AUZ95556.1 MG641885_p64 hypothetical protein phrog_3108 unknown function unknown function 1 46661 47158
AUZ95541.1 MG641885_p49 hypothetical protein singleton unknown function unknown function 1 40280 40483
AUZ95506.1 MG641885_p14 tail tape measure protein phrog_1538 tail length tape measure protein tail 1 9755 12097
AUZ95511.1 MG641885_p19 minor tail protein phrog_9017 tail fiber protein tail 1 16891 17673
AUZ95505.1 MG641885_p13 hypothetical protein phrog_313 Tail assembly chaperone tail 1 9052 9483
AUZ95503.1 MG641885_p11 hypothetical protein phrog_179 tail terminator connector 1 7684 8103
AUZ95508.1 MG641885_p16 hypothetical protein phrog_2048 tail protein tail 1 12689 13273
AUZ95512.1 MG641885_p20 tail fibers protein phrog_2871 tail protein tail 1 17674 20676
AUZ95504.1 MG641885_p12 hypothetical protein phrog_290 minor tail protein tail 1 8219 9040
AUZ95516.1 MG641885_p24 hypothetical protein phrog_2378 unknown function unknown function 1 24959 25492
AUZ95543.1 MG641885_p51 hypothetical protein singleton unknown function unknown function 1 41318 41584
AUZ95528.1 MG641885_p36 hypothetical protein singleton unknown function unknown function 1 34925 35251
AUZ95497.1 MG641885_p5 capsid protein phrog_247 major head protein head and packaging 1 4939 6033
AUZ95535.1 MG641885_p43 hypothetical protein phrog_14517 unknown function unknown function 1 37535 38338
AUZ95551.1 MG641885_p59 hypothetical protein phrog_421 unknown function unknown function 1 44324 45037
AUZ95538.1 MG641885_p46 hypothetical protein singleton unknown function unknown function 1 39093 39536
AUZ95514.1 MG641885_p22 superfamily II DNA/RNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 22687 24522
AUZ95533.1 MG641885_p41 hypothetical protein singleton unknown function unknown function 1 36968 37399
AUZ95539.1 MG641885_p47 hypothetical protein singleton unknown function unknown function 1 39524 39988
AUZ95558.1 MG641885_p66 hypothetical protein phrog_5975 unknown function unknown function 1 47499 47969
AUZ95521.1 MG641885_p29 DNA-binding protein phrog_18154 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 30248 30589
AUZ95496.1 MG641885_p4 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 4138 4929
AUZ95515.1 MG641885_p23 hypothetical protein phrog_5888 unknown function unknown function 1 24576 24950
AUZ95524.1 MG641885_p32 hydrolase phrog_7076 dATP triphosphohydrolase DNA, RNA and nucleotide metabolism 1 32621 33205
AUZ95559.1 MG641885_p67 hypothetical protein singleton unknown function unknown function 1 47953 48111
AUZ95536.1 MG641885_p44 hypothetical protein phrog_14808 unknown function unknown function 1 38387 38698
AUZ95552.1 MG641885_p60 hypothetical protein singleton unknown function unknown function 1 45117 45287
AUZ95557.1 MG641885_p65 holin phrog_785 holin lysis 1 47158 47499
AUZ95537.1 MG641885_p45 hypothetical protein singleton unknown function unknown function 1 38695 39096
AUZ95553.1 MG641885_p61 hypothetical protein singleton unknown function unknown function 1 45299 45703
AUZ95548.1 MG641885_p56 hypothetical protein singleton unknown function unknown function 1 42975 43214
AUZ95495.1 MG641885_p3 hypothetical protein phrog_241 head morphogenesis head and packaging 1 2993 4060
AUZ95499.1 MG641885_p7 hypothetical protein singleton unknown function unknown function 1 6280 6429
AUZ95531.1 MG641885_p39 hypothetical protein singleton unknown function unknown function 1 35829 36062
AUZ95545.1 MG641885_p53 hypothetical protein singleton unknown function unknown function 1 41861 42223
AUZ95517.1 MG641885_p25 hypothetical protein singleton unknown function unknown function 1 25606 25878
AUZ95544.1 MG641885_p52 hypothetical protein singleton unknown function unknown function 1 41584 41703
AUZ95522.1 MG641885_p30 adenylosuccinate synthetase phrog_1211 2-aminooxy adenylosuccinate synthetase DNA, RNA and nucleotide metabolism 1 30636 31739
AUZ95523.1 MG641885_p31 nucleotide pyrophosphohydrolase phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 31752 32624
AUZ95518.1 MG641885_p26 hypothetical protein phrog_2402 unknown function unknown function 1 25987 26745
AUZ95530.1 MG641885_p38 hypothetical protein phrog_10979 membrane protein moron, auxiliary metabolic gene and host takeover 1 35713 35832
AUZ95547.1 MG641885_p55 hypothetical protein singleton unknown function unknown function 1 42694 42975
AUZ95526.1 MG641885_p34 hypothetical protein singleton unknown function unknown function 1 33593 33922
AUZ95501.1 MG641885_p9 hypothetical protein phrog_161 head closure Hc1 connector 1 6957 7307
AUZ95549.1 MG641885_p57 hypothetical protein singleton unknown function unknown function 1 43214 43540
AUZ95550.1 MG641885_p58 hypothetical protein singleton unknown function unknown function 1 44010 44300
AUZ95520.1 MG641885_p28 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 28294 30171
AUZ95532.1 MG641885_p40 hypothetical protein singleton unknown function unknown function 1 36043 36894
AUZ95527.1 MG641885_p35 hypothetical protein singleton unknown function unknown function 1 34011 34928
AUZ95540.1 MG641885_p48 hypothetical protein phrog_20478 unknown function unknown function 1 39969 40283
AUZ95493.1 MG641885_p1 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1 1470
AUZ95525.1 MG641885_p33 hypothetical protein phrog_2165 DNA helicase DNA, RNA and nucleotide metabolism 1 33198 33623