| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG673519 |
Definition |
Escherichia phage LAMP, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Kuravirus; unclassified Kuravirus. |
DB of origin |
NUCCORE |
Length |
68521 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
95 |
%GC |
42.23 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUM57671.1 | MG673519_p89 | hypothetical protein | phrog_12974 | unknown function | unknown function | -1 | 62950 | 63339 |
| AUM57605.1 | MG673519_p22 | hypothetical protein | phrog_4287 | DNA ejection protein | DNA, RNA and nucleotide metabolism | 1 | 23498 | 24466 |
| AUM57591.1 | MG673519_p8 | scaffolding protein | phrog_9013 | head scaffolding protein | head and packaging | 1 | 5902 | 6987 |
| AUM57624.1 | MG673519_p41 | hypothetical protein | phrog_1312 | unknown function | unknown function | -1 | 36264 | 36392 |
| AUM57653.1 | MG673519_p71 | hypothetical protein | phrog_4877 | unknown function | unknown function | -1 | 54699 | 55319 |
| AUM57656.1 | MG673519_p74 | hypothetical protein | phrog_13063 | unknown function | unknown function | -1 | 57107 | 58306 |
| AUM57648.1 | MG673519_p66 | amino acid ligase/glutaminyl transferase | phrog_2599 | ribosomal protein S6 glutaminyl transferase | moron, auxiliary metabolic gene and host takeover | -1 | 49850 | 51043 |
| AUM57637.1 | MG673519_p55 | hypothetical protein | phrog_10984 | unknown function | unknown function | -1 | 43367 | 43696 |
| AUM57641.1 | MG673519_p59 | type I DNA polymerase | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 45885 | 46439 |
| AUM57640.1 | MG673519_p58 | nucleotidyltransferase domain-containing protein | phrog_12715 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | -1 | 44522 | 45883 |
| AUM57620.1 | MG673519_p37 | hypothetical protein | phrog_10314 | unknown function | unknown function | -1 | 35311 | 35472 |
| AUM57593.1 | MG673519_p10 | Ig-like protein | phrog_13745 | Ig domain containing protein | other | 1 | 8096 | 8608 |
| AUM57666.1 | MG673519_p84 | lipoprotein | phrog_4281 | unknown function | unknown function | -1 | 61070 | 61351 |
| AUM57618.1 | MG673519_p35 | hypothetical protein | phrog_11811 | unknown function | unknown function | -1 | 34983 | 35171 |
| AUM57615.1 | MG673519_p32 | spanin | phrog_2425 | unknown function | unknown function | -1 | 33262 | 33435 |
| AUM57621.1 | MG673519_p38 | hypothetical protein | phrog_4919 | unknown function | unknown function | -1 | 35469 | 35861 |
| AUM57606.1 | MG673519_p23 | hypothetical protein | phrog_12130 | unknown function | unknown function | 1 | 24480 | 26135 |
| AUM57655.1 | MG673519_p73 | hypothetical protein | phrog_13102 | unknown function | unknown function | -1 | 56125 | 57096 |
| AUM57602.1 | MG673519_p19 | structural protein | phrog_1265 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 20587 | 21621 |
| AUM57657.1 | MG673519_p75 | hypothetical protein | phrog_11370 | unknown function | unknown function | -1 | 58318 | 58680 |
| AUM57626.1 | MG673519_p44 | hypothetical protein | phrog_6814 | unknown function | unknown function | -1 | 39053 | 39307 |
| AUM57589.1 | MG673519_p6 | portal protein | phrog_1216 | portal protein | head and packaging | 1 | 3413 | 5656 |
| AUM57642.1 | MG673519_p60 | primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | -1 | 46433 | 48223 |
| AUM57677.1 | MG673519_p95 | hypothetical protein | phrog_13018 | unknown function | unknown function | -1 | 64991 | 65890 |
| AUM57597.1 | MG673519_p14 | holin | phrog_11161 | holin | lysis | 1 | 14946 | 15164 |
| AUM57675.1 | MG673519_p93 | hypothetical protein | phrog_6887 | unknown function | unknown function | -1 | 64446 | 64664 |
| AUM57609.1 | MG673519_p26 | hypothetical protein | phrog_3715 | unknown function | unknown function | -1 | 30731 | 30958 |
| AUM57649.1 | MG673519_p67 | hypothetical protein | phrog_13464 | unknown function | unknown function | -1 | 51046 | 51270 |
| AUM57638.1 | MG673519_p56 | hypothetical protein | phrog_4939 | unknown function | unknown function | -1 | 43769 | 43978 |
| AUM57636.1 | MG673519_p54 | DNA-binding protein | phrog_3636 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 42811 | 43374 |
| AUM57594.1 | MG673519_p11 | gatekeeper protein | phrog_2941 | virion structural protein | head and packaging | 1 | 8710 | 9462 |
| AUM57669.1 | MG673519_p87 | hypothetical protein | phrog_13305 | unknown function | unknown function | -1 | 62013 | 62153 |
| AUM57625.1 | MG673519_p43 | hypothetical protein | phrog_11427 | unknown function | unknown function | -1 | 38627 | 39049 |
| AUM57667.1 | MG673519_p85 | hypothetical protein | phrog_1972 | unknown function | unknown function | -1 | 61510 | 61761 |
| AUM57664.1 | MG673519_p82 | hypothetical protein | phrog_6570 | unknown function | unknown function | -1 | 60640 | 60861 |
| AUM57630.1 | MG673519_p48 | hypothetical protein | phrog_14369 | unknown function | unknown function | -1 | 40851 | 41036 |
| AUM57635.1 | MG673519_p53 | hypothetical protein | phrog_9296 | unknown function | unknown function | -1 | 42573 | 42752 |
| AUM57659.1 | MG673519_p77 | hypothetical protein | phrog_6662 | unknown function | unknown function | -1 | 59066 | 59299 |
| AUM57613.1 | MG673519_p30 | hypothetical protein | phrog_236 | nucleotide kinase | other | -1 | 32352 | 32621 |
| AUM57611.1 | MG673519_p28 | hypothetical protein | phrog_10643 | unknown function | unknown function | -1 | 31339 | 31518 |
| AUM57652.1 | MG673519_p70 | amidoligase enzyme | phrog_7469 | amidoligase enzyme | other | -1 | 53599 | 54702 |
| AUM57633.1 | MG673519_p51 | thymidylate synthase protein | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 41617 | 42273 |
| AUM57628.1 | MG673519_p46 | hypothetical protein | singleton | unknown function | unknown function | -1 | 39748 | 39993 |
| AUM57587.1 | MG673519_p4 | hypothetical protein | phrog_8771 | unknown function | unknown function | 1 | 1268 | 1741 |
| AUM57672.1 | MG673519_p90 | hypothetical protein | phrog_22185 | unknown function | unknown function | -1 | 63554 | 63727 |
| AUM57584.1 | MG673519_p1 | hypothetical protein | phrog_7696 | unknown function | unknown function | 1 | 286 | 450 |
| AUM57623.1 | MG673519_p40 | hypothetical protein | phrog_10640 | unknown function | unknown function | -1 | 36100 | 36267 |
| AUM57676.1 | MG673519_p94 | hypothetical protein | phrog_12675 | unknown function | unknown function | -1 | 64661 | 64879 |
| AUM57598.1 | MG673519_p15 | lysis protein | phrog_7 | endolysin | lysis | 1 | 15194 | 15685 |
| AUM57663.1 | MG673519_p81 | transcriptional regulator | phrog_323 | transcriptional regulator, D5-like | transcription regulation | -1 | 60032 | 60343 |
| AUM57639.1 | MG673519_p57 | dCTP deaminase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | -1 | 43979 | 44512 |
| AUM57670.1 | MG673519_p88 | hypothetical protein | phrog_12154 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 62454 | 62750 |
| AUM57654.1 | MG673519_p72 | hypothetical protein | phrog_3815 | COOH.NH2 ligase | other | -1 | 55326 | 56132 |
| AUM57651.1 | MG673519_p69 | glutamine amidotransferase | phrog_4736 | L-glutamine-D-fructose-6-phosphate aminotransferase | other | -1 | 51489 | 53519 |
| AUM57627.1 | MG673519_p45 | hypothetical protein | phrog_4590 | unknown function | unknown function | -1 | 39376 | 39693 |
| AUM57650.1 | MG673519_p68 | hypothetical protein | phrog_9477 | unknown function | unknown function | -1 | 51251 | 51484 |
| AUM57645.1 | MG673519_p63 | hypothetical protein | phrog_2520 | gamma-glutamyl cyclotransferase | moron, auxiliary metabolic gene and host takeover | -1 | 48921 | 49343 |
| AUM57644.1 | MG673519_p62 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 48416 | 48937 |
| AUM57660.1 | MG673519_p78 | hypothetical protein | phrog_14557 | unknown function | unknown function | -1 | 59405 | 59521 |
| AUM57658.1 | MG673519_p76 | hypothetical protein | phrog_13048 | unknown function | unknown function | -1 | 58683 | 58835 |
| AUM57643.1 | MG673519_p61 | hypothetical protein | phrog_10819 | unknown function | unknown function | -1 | 48250 | 48447 |
| AUM57631.1 | MG673519_p49 | hypothetical protein | phrog_35253 | unknown function | unknown function | -1 | 41033 | 41203 |
| AUM57612.1 | MG673519_p29 | 5'-3' exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 31532 | 32350 |
| AUM57622.1 | MG673519_p39 | hypothetical protein | phrog_12230 | unknown function | unknown function | -1 | 35909 | 36085 |
| AUM57617.1 | MG673519_p34 | hypothetical protein | phrog_6599 | unknown function | unknown function | -1 | 33815 | 34561 |
| AUM57616.1 | MG673519_p33 | hypothetical protein | phrog_1152 | Rz-like spanin | lysis | -1 | 33407 | 33757 |
| AUM57596.1 | MG673519_p13 | fiber protein | phrog_6921 | tail fiber protein | tail | 1 | 12718 | 14853 |
| AUM57610.1 | MG673519_p27 | hypothetical protein | phrog_3106 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 30948 | 31352 |
| AUM57665.1 | MG673519_p83 | hypothetical protein | phrog_13462 | unknown function | unknown function | -1 | 60871 | 61068 |
| AUM57590.1 | MG673519_p7 | hypothetical protein | phrog_12967 | unknown function | unknown function | 1 | 5666 | 5902 |
| AUM57634.1 | MG673519_p52 | thiol-disulfide isomerase and thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 42289 | 42564 |
| AUM57646.1 | MG673519_p64 | hypothetical protein | phrog_8591 | unknown function | unknown function | -1 | 49413 | 49598 |
| AUM57603.1 | MG673519_p20 | lytic transglycosylase | phrog_12507 | transglycosylase | other | 1 | 21631 | 22413 |
| AUM57661.1 | MG673519_p79 | hypothetical protein | phrog_12612 | unknown function | unknown function | -1 | 59530 | 59778 |
| AUM57662.1 | MG673519_p80 | hypothetical protein | phrog_7431 | unknown function | unknown function | -1 | 59781 | 60023 |
| AUM57607.1 | MG673519_p24 | hypothetical protein | phrog_14629 | unknown function | unknown function | 1 | 26158 | 30510 |
| AUM57632.1 | MG673519_p50 | NAD-dependent DNA ligase | phrog_6466 | DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 41258 | 41614 |
| AUM57600.1 | MG673519_p17 | receptor binding protein | phrog_14417 | tail fiber protein; host specificity | tail | 1 | 16511 | 19528 |
| AUM57588.1 | MG673519_p5 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 1811 | 3352 |
| AUM57601.1 | MG673519_p18 | tail tip fiber protein | phrog_16534 | tail fiber protein | tail | 1 | 19572 | 20585 |
| AUM57608.1 | MG673519_p25 | hypothetical protein | phrog_653 | unknown function | unknown function | -1 | 30561 | 30722 |
| AUM57585.1 | MG673519_p2 | hypothetical protein | phrog_12698 | unknown function | unknown function | 1 | 555 | 776 |
| AUM57629.1 | MG673519_p47 | PhoH-like protein | phrog_170 | PhoH-like phosphate starvation-inducible | other | -1 | 40105 | 40854 |
| AUM57668.1 | MG673519_p86 | hypothetical protein | phrog_9565 | unknown function | unknown function | -1 | 61814 | 62023 |
| AUM57673.1 | MG673519_p91 | hypothetical protein | phrog_11641 | unknown function | unknown function | -1 | 63724 | 64167 |
| AUM57599.1 | MG673519_p16 | hypothetical protein | phrog_6465 | tail protein | tail | 1 | 15698 | 16501 |
| AUM57678.1 | MG673519_p42 | DNA polymerase-like protein | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 36462 | 38574 |
| AUM57614.1 | MG673519_p31 | RNA polymerase ECF sigma factor | phrog_1740 | RNA polymerase sigma factor | transcription regulation | -1 | 32618 | 33262 |
| AUM57592.1 | MG673519_p9 | major head protein | phrog_1328 | major head protein | head and packaging | 1 | 7029 | 8090 |
| AUM57604.1 | MG673519_p21 | hypothetical protein | phrog_4287 | DNA ejection protein | DNA, RNA and nucleotide metabolism | 1 | 22433 | 23485 |
| AUM57619.1 | MG673519_p36 | hypothetical protein | phrog_3955 | unknown function | unknown function | -1 | 35168 | 35308 |
| AUM57595.1 | MG673519_p12 | fiber protein | phrog_10305 | tail fiber protein | tail | 1 | 9472 | 12678 |
| AUM57586.1 | MG673519_p3 | hypothetical protein | phrog_12176 | ABC transporter | moron, auxiliary metabolic gene and host takeover | 1 | 780 | 1211 |
| AUM57647.1 | MG673519_p65 | hypothetical protein | phrog_8339 | unknown function | unknown function | -1 | 49595 | 49843 |
| AUM57674.1 | MG673519_p92 | hypothetical protein | phrog_14815 | unknown function | unknown function | -1 | 64237 | 64446 |