Genomic map of Escherichia phage LAMP (MG673519)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG673519
Definition
Escherichia phage LAMP, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Kuravirus; unclassified Kuravirus.
DB of origin
NUCCORE
Length
68521
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
95
%GC
42.23
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUM57671.1 MG673519_p89 hypothetical protein phrog_12974 unknown function unknown function -1 62950 63339
AUM57605.1 MG673519_p22 hypothetical protein phrog_4287 DNA ejection protein DNA, RNA and nucleotide metabolism 1 23498 24466
AUM57591.1 MG673519_p8 scaffolding protein phrog_9013 head scaffolding protein head and packaging 1 5902 6987
AUM57624.1 MG673519_p41 hypothetical protein phrog_1312 unknown function unknown function -1 36264 36392
AUM57653.1 MG673519_p71 hypothetical protein phrog_4877 unknown function unknown function -1 54699 55319
AUM57656.1 MG673519_p74 hypothetical protein phrog_13063 unknown function unknown function -1 57107 58306
AUM57648.1 MG673519_p66 amino acid ligase/glutaminyl transferase phrog_2599 ribosomal protein S6 glutaminyl transferase moron, auxiliary metabolic gene and host takeover -1 49850 51043
AUM57637.1 MG673519_p55 hypothetical protein phrog_10984 unknown function unknown function -1 43367 43696
AUM57641.1 MG673519_p59 type I DNA polymerase phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 45885 46439
AUM57640.1 MG673519_p58 nucleotidyltransferase domain-containing protein phrog_12715 nucleotidyltransferase DNA, RNA and nucleotide metabolism -1 44522 45883
AUM57620.1 MG673519_p37 hypothetical protein phrog_10314 unknown function unknown function -1 35311 35472
AUM57593.1 MG673519_p10 Ig-like protein phrog_13745 Ig domain containing protein other 1 8096 8608
AUM57666.1 MG673519_p84 lipoprotein phrog_4281 unknown function unknown function -1 61070 61351
AUM57618.1 MG673519_p35 hypothetical protein phrog_11811 unknown function unknown function -1 34983 35171
AUM57615.1 MG673519_p32 spanin phrog_2425 unknown function unknown function -1 33262 33435
AUM57621.1 MG673519_p38 hypothetical protein phrog_4919 unknown function unknown function -1 35469 35861
AUM57606.1 MG673519_p23 hypothetical protein phrog_12130 unknown function unknown function 1 24480 26135
AUM57655.1 MG673519_p73 hypothetical protein phrog_13102 unknown function unknown function -1 56125 57096
AUM57602.1 MG673519_p19 structural protein phrog_1265 membrane protein moron, auxiliary metabolic gene and host takeover 1 20587 21621
AUM57657.1 MG673519_p75 hypothetical protein phrog_11370 unknown function unknown function -1 58318 58680
AUM57626.1 MG673519_p44 hypothetical protein phrog_6814 unknown function unknown function -1 39053 39307
AUM57589.1 MG673519_p6 portal protein phrog_1216 portal protein head and packaging 1 3413 5656
AUM57642.1 MG673519_p60 primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism -1 46433 48223
AUM57677.1 MG673519_p95 hypothetical protein phrog_13018 unknown function unknown function -1 64991 65890
AUM57597.1 MG673519_p14 holin phrog_11161 holin lysis 1 14946 15164
AUM57675.1 MG673519_p93 hypothetical protein phrog_6887 unknown function unknown function -1 64446 64664
AUM57609.1 MG673519_p26 hypothetical protein phrog_3715 unknown function unknown function -1 30731 30958
AUM57649.1 MG673519_p67 hypothetical protein phrog_13464 unknown function unknown function -1 51046 51270
AUM57638.1 MG673519_p56 hypothetical protein phrog_4939 unknown function unknown function -1 43769 43978
AUM57636.1 MG673519_p54 DNA-binding protein phrog_3636 DNA binding protein DNA, RNA and nucleotide metabolism -1 42811 43374
AUM57594.1 MG673519_p11 gatekeeper protein phrog_2941 virion structural protein head and packaging 1 8710 9462
AUM57669.1 MG673519_p87 hypothetical protein phrog_13305 unknown function unknown function -1 62013 62153
AUM57625.1 MG673519_p43 hypothetical protein phrog_11427 unknown function unknown function -1 38627 39049
AUM57667.1 MG673519_p85 hypothetical protein phrog_1972 unknown function unknown function -1 61510 61761
AUM57664.1 MG673519_p82 hypothetical protein phrog_6570 unknown function unknown function -1 60640 60861
AUM57630.1 MG673519_p48 hypothetical protein phrog_14369 unknown function unknown function -1 40851 41036
AUM57635.1 MG673519_p53 hypothetical protein phrog_9296 unknown function unknown function -1 42573 42752
AUM57659.1 MG673519_p77 hypothetical protein phrog_6662 unknown function unknown function -1 59066 59299
AUM57613.1 MG673519_p30 hypothetical protein phrog_236 nucleotide kinase other -1 32352 32621
AUM57611.1 MG673519_p28 hypothetical protein phrog_10643 unknown function unknown function -1 31339 31518
AUM57652.1 MG673519_p70 amidoligase enzyme phrog_7469 amidoligase enzyme other -1 53599 54702
AUM57633.1 MG673519_p51 thymidylate synthase protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 41617 42273
AUM57628.1 MG673519_p46 hypothetical protein singleton unknown function unknown function -1 39748 39993
AUM57587.1 MG673519_p4 hypothetical protein phrog_8771 unknown function unknown function 1 1268 1741
AUM57672.1 MG673519_p90 hypothetical protein phrog_22185 unknown function unknown function -1 63554 63727
AUM57584.1 MG673519_p1 hypothetical protein phrog_7696 unknown function unknown function 1 286 450
AUM57623.1 MG673519_p40 hypothetical protein phrog_10640 unknown function unknown function -1 36100 36267
AUM57676.1 MG673519_p94 hypothetical protein phrog_12675 unknown function unknown function -1 64661 64879
AUM57598.1 MG673519_p15 lysis protein phrog_7 endolysin lysis 1 15194 15685
AUM57663.1 MG673519_p81 transcriptional regulator phrog_323 transcriptional regulator, D5-like transcription regulation -1 60032 60343
AUM57639.1 MG673519_p57 dCTP deaminase phrog_1663 dCTP deaminase DNA, RNA and nucleotide metabolism -1 43979 44512
AUM57670.1 MG673519_p88 hypothetical protein phrog_12154 DNA helicase DNA, RNA and nucleotide metabolism -1 62454 62750
AUM57654.1 MG673519_p72 hypothetical protein phrog_3815 COOH.NH2 ligase other -1 55326 56132
AUM57651.1 MG673519_p69 glutamine amidotransferase phrog_4736 L-glutamine-D-fructose-6-phosphate aminotransferase other -1 51489 53519
AUM57627.1 MG673519_p45 hypothetical protein phrog_4590 unknown function unknown function -1 39376 39693
AUM57650.1 MG673519_p68 hypothetical protein phrog_9477 unknown function unknown function -1 51251 51484
AUM57645.1 MG673519_p63 hypothetical protein phrog_2520 gamma-glutamyl cyclotransferase moron, auxiliary metabolic gene and host takeover -1 48921 49343
AUM57644.1 MG673519_p62 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 48416 48937
AUM57660.1 MG673519_p78 hypothetical protein phrog_14557 unknown function unknown function -1 59405 59521
AUM57658.1 MG673519_p76 hypothetical protein phrog_13048 unknown function unknown function -1 58683 58835
AUM57643.1 MG673519_p61 hypothetical protein phrog_10819 unknown function unknown function -1 48250 48447
AUM57631.1 MG673519_p49 hypothetical protein phrog_35253 unknown function unknown function -1 41033 41203
AUM57612.1 MG673519_p29 5'-3' exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 31532 32350
AUM57622.1 MG673519_p39 hypothetical protein phrog_12230 unknown function unknown function -1 35909 36085
AUM57617.1 MG673519_p34 hypothetical protein phrog_6599 unknown function unknown function -1 33815 34561
AUM57616.1 MG673519_p33 hypothetical protein phrog_1152 Rz-like spanin lysis -1 33407 33757
AUM57596.1 MG673519_p13 fiber protein phrog_6921 tail fiber protein tail 1 12718 14853
AUM57610.1 MG673519_p27 hypothetical protein phrog_3106 HNH endonuclease DNA, RNA and nucleotide metabolism -1 30948 31352
AUM57665.1 MG673519_p83 hypothetical protein phrog_13462 unknown function unknown function -1 60871 61068
AUM57590.1 MG673519_p7 hypothetical protein phrog_12967 unknown function unknown function 1 5666 5902
AUM57634.1 MG673519_p52 thiol-disulfide isomerase and thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 42289 42564
AUM57646.1 MG673519_p64 hypothetical protein phrog_8591 unknown function unknown function -1 49413 49598
AUM57603.1 MG673519_p20 lytic transglycosylase phrog_12507 transglycosylase other 1 21631 22413
AUM57661.1 MG673519_p79 hypothetical protein phrog_12612 unknown function unknown function -1 59530 59778
AUM57662.1 MG673519_p80 hypothetical protein phrog_7431 unknown function unknown function -1 59781 60023
AUM57607.1 MG673519_p24 hypothetical protein phrog_14629 unknown function unknown function 1 26158 30510
AUM57632.1 MG673519_p50 NAD-dependent DNA ligase phrog_6466 DNA ligase DNA, RNA and nucleotide metabolism -1 41258 41614
AUM57600.1 MG673519_p17 receptor binding protein phrog_14417 tail fiber protein; host specificity tail 1 16511 19528
AUM57588.1 MG673519_p5 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1811 3352
AUM57601.1 MG673519_p18 tail tip fiber protein phrog_16534 tail fiber protein tail 1 19572 20585
AUM57608.1 MG673519_p25 hypothetical protein phrog_653 unknown function unknown function -1 30561 30722
AUM57585.1 MG673519_p2 hypothetical protein phrog_12698 unknown function unknown function 1 555 776
AUM57629.1 MG673519_p47 PhoH-like protein phrog_170 PhoH-like phosphate starvation-inducible other -1 40105 40854
AUM57668.1 MG673519_p86 hypothetical protein phrog_9565 unknown function unknown function -1 61814 62023
AUM57673.1 MG673519_p91 hypothetical protein phrog_11641 unknown function unknown function -1 63724 64167
AUM57599.1 MG673519_p16 hypothetical protein phrog_6465 tail protein tail 1 15698 16501
AUM57678.1 MG673519_p42 DNA polymerase-like protein phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 36462 38574
AUM57614.1 MG673519_p31 RNA polymerase ECF sigma factor phrog_1740 RNA polymerase sigma factor transcription regulation -1 32618 33262
AUM57592.1 MG673519_p9 major head protein phrog_1328 major head protein head and packaging 1 7029 8090
AUM57604.1 MG673519_p21 hypothetical protein phrog_4287 DNA ejection protein DNA, RNA and nucleotide metabolism 1 22433 23485
AUM57619.1 MG673519_p36 hypothetical protein phrog_3955 unknown function unknown function -1 35168 35308
AUM57595.1 MG673519_p12 fiber protein phrog_10305 tail fiber protein tail 1 9472 12678
AUM57586.1 MG673519_p3 hypothetical protein phrog_12176 ABC transporter moron, auxiliary metabolic gene and host takeover 1 780 1211
AUM57647.1 MG673519_p65 hypothetical protein phrog_8339 unknown function unknown function -1 49595 49843
AUM57674.1 MG673519_p92 hypothetical protein phrog_14815 unknown function unknown function -1 64237 64446