Genomic map of Streptococcus phage vB_SthS_VA214 (MG708274)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG708274
Definition
Streptococcus phage vB_SthS_VA214, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus; unclassified Moineauvirus; Viruses.
DB of origin
NUCCORE
Length
38253
Host Name
Streptococcus thermophilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
38.22
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUN43390.1 MG708274_p38 tail length tape-measure protein phrog_167 tail length tape measure protein tail -1 23818 28596
AUN43375.1 MG708274_p23 hypothetical protein phrog_11483 unknown function unknown function -1 11301 11489
AUN43380.1 MG708274_p28 lysin phrog_4238 endolysin lysis -1 13501 13728
AUN43381.1 MG708274_p29 hypothetical protein phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism -1 13790 14551
AUN43393.1 MG708274_p41 tail assembly protein phrog_1217 tail protein tail -1 29870 30241
AUN43374.1 MG708274_p22 hypothetical protein phrog_2277 unknown function unknown function -1 11079 11255
AUN43388.1 MG708274_p36 capsid and scaffold protein phrog_588 tail fiber protein and host specificity tail -1 18537 22256
AUN43367.1 MG708274_p15 DNA helicase loader phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism -1 6819 7601
AUN43405.1 MG708274_p53 hypothetical protein phrog_36 transcriptional regulator transcription regulation -1 37789 38187
AUN43384.1 MG708274_p32 hypothetical protein phrog_1296 holin lysis -1 15613 15936
AUN43359.1 MG708274_p7 hypothetical protein phrog_1489 unknown function unknown function -1 2940 3095
AUN43392.1 MG708274_p40 major tail protein phrog_88 major tail protein tail -1 29240 29851
AUN43404.1 MG708274_p52 homing endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism -1 37172 37678
AUN43377.1 MG708274_p25 hypothetical protein phrog_4964 unknown function unknown function -1 11792 12343
AUN43398.1 MG708274_p46 Clp protease-like protein phrog_94 head maturation protease head and packaging -1 32559 33224
AUN43376.1 MG708274_p24 hypothetical protein phrog_16094 unknown function unknown function -1 11515 11766
AUN43403.1 MG708274_p51 terminase small subunit phrog_83 terminase small subunit head and packaging -1 36531 36992
AUN43391.1 MG708274_p39 tail assembly protein phrog_1346 tail protein tail -1 28814 29167
AUN43389.1 MG708274_p37 tail fibers protein phrog_202 distal tail protein Dit tail -1 22256 23821
AUN43383.1 MG708274_p31 holin phrog_297 holin lysis -1 15362 15604
AUN43369.1 MG708274_p17 hypothetical protein phrog_1022 unknown function unknown function -1 8674 8817
AUN43402.1 MG708274_p50 terminase large subunit phrog_4914 terminase large subunit head and packaging -1 35761 36450
AUN43356.1 MG708274_p4 DNA-binding protein phrog_1994 DNA binding protein DNA, RNA and nucleotide metabolism -1 1694 2206
AUN43370.1 MG708274_p18 transcriptional regulator phrog_3 transcriptional repressor transcription regulation -1 8850 9059
AUN43361.1 MG708274_p9 hypothetical protein phrog_1982 unknown function unknown function -1 3744 3980
AUN43371.1 MG708274_p19 antirepressor protein phrog_2902 anti-repressor transcription regulation -1 9186 9719
AUN43387.1 MG708274_p35 capsid and scaffold protein phrog_372 tail protein tail -1 16515 18536
AUN43379.1 MG708274_p27 hypothetical protein phrog_8487 unknown function unknown function -1 12687 13022
AUN43366.1 MG708274_p14 hypothetical protein phrog_3159 unknown function unknown function -1 6636 6818
AUN43396.1 MG708274_p44 DNA packaging protein phrog_40 head-tail adaptor Ad1 connector -1 31018 31335
AUN43378.1 MG708274_p26 hypothetical protein phrog_13146 unknown function unknown function -1 12371 12661
AUN43360.1 MG708274_p8 hypothetical protein phrog_121 unknown function unknown function -1 3144 3731
AUN43382.1 MG708274_p30 lysin phrog_998 endolysin lysis -1 14758 15360
AUN43358.1 MG708274_p6 hypothetical protein phrog_13248 unknown function unknown function -1 2748 2939
AUN43364.1 MG708274_p12 hypothetical protein phrog_674 unknown function unknown function -1 4903 5874
AUN43357.1 MG708274_p5 hypothetical protein phrog_121 unknown function unknown function -1 2207 2701
AUN43385.1 MG708274_p33 hypothetical protein phrog_1567 unknown function unknown function -1 15952 16098
AUN43400.1 MG708274_p48 capsid and scaffold protein phrog_1142 unknown function unknown function -1 34386 34565
AUN43363.1 MG708274_p11 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 4448 4906
AUN43395.1 MG708274_p43 capsid and scaffold protein phrog_25 head closure Hc1 connector -1 30675 31025
AUN43365.1 MG708274_p13 essential recombination function protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 5877 6509
AUN43386.1 MG708274_p34 hypothetical protein phrog_1060 unknown function unknown function -1 16105 16500
AUN43372.1 MG708274_p20 hypothetical protein phrog_1733 unknown function unknown function -1 9712 10656
AUN43394.1 MG708274_p42 tail assembly protein phrog_5 tail completion or Neck1 protein connector -1 30246 30668
AUN43401.1 MG708274_p49 terminase large subunit phrog_9 terminase large subunit head and packaging -1 34569 35606
AUN43373.1 MG708274_p21 cro-like protein phrog_3 transcriptional repressor transcription regulation -1 10697 10900
AUN43354.1 MG708274_p2 hypothetical protein phrog_98 unknown function unknown function -1 1007 1420
AUN43368.1 MG708274_p16 replication initiation protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism -1 7613 8458
AUN43397.1 MG708274_p45 capsid protein phrog_10 major head protein head and packaging -1 31350 32543
AUN43353.1 MG708274_p1 hypothetical protein phrog_1814 unknown function unknown function -1 298 1005
AUN43362.1 MG708274_p10 holliday junction resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 3980 4438
AUN43399.1 MG708274_p47 portal protein phrog_12 portal protein head and packaging -1 33211 34368
AUN43355.1 MG708274_p3 hypothetical protein phrog_884 unknown function unknown function -1 1417 1704