Genomic map of Streptococcus phage vB_SthS_VA460 (MG708275)

functional categories (each PHROG annotation is associated to a category)             Notes   
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG

More about this genome

Streptococcus phage vB_SthS_VA460, complete genome.
Molecule type
Genome structure
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus; unclassified Moineauvirus.
DB of origin
Host Name
Streptococcus thermophilus
Host domain
Is prophage?
Number of proteins
Number of singletons
Number of paralogs

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUN43424.1 MG708275_p19 hypothetical protein phrog_884 unknown function unknown function -1 12563 12766
AUN43446.1 MG708275_p41 endonuclease phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism -1 23587 24348
AUN43415.1 MG708275_p10 terminase large subunit phrog_9 terminase large subunit head and packaging -1 5900 7771
AUN43434.1 MG708275_p29 single-stranded DNA-binding protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 17549 18004
AUN43455.1 MG708275_p50 capsid and scaffold protein phrog_372 tail protein tail -1 28448 30511
AUN43451.1 MG708275_p46 holin phrog_297 holin lysis -1 27319 27549
AUN43456.1 MG708275_p51 tail assembly protein phrog_588 tail fiber protein and host specificity tail -1 30511 33960
AUN43432.1 MG708275_p27 DNA primase/helicase phrog_864 DNA primase DNA, RNA and nucleotide metabolism -1 15233 16744
AUN43423.1 MG708275_p18 YopX superfamily protein phrog_98 unknown function unknown function -1 12150 12560
AUN43459.1 MG708275_p54 hypothetical protein phrog_2629 unknown function unknown function -1 40233 40376
AUN43448.1 MG708275_p43 hypothetical protein singleton unknown function unknown function -1 25237 26526
AUN43414.1 MG708275_p9 capsid and scaffold protein phrog_1142 unknown function unknown function -1 5711 5896
AUN43419.1 MG708275_p14 homing endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism -1 9607 10125
AUN43431.1 MG708275_p26 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 14643 14966
AUN43443.1 MG708275_p38 hypothetical protein phrog_4964 unknown function unknown function -1 21982 22533
AUN43421.1 MG708275_p16 terminase large subunit singleton unknown function unknown function -1 10782 11144
AUN43422.1 MG708275_p17 hypothetical protein phrog_1814 unknown function unknown function -1 11429 12136
AUN43436.1 MG708275_p31 NTP-binding protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 19305 20006
AUN43427.1 MG708275_p22 hypothetical protein singleton unknown function unknown function -1 13690 14031
AUN43444.1 MG708275_p39 hypothetical protein phrog_12732 unknown function unknown function -1 22555 22899
AUN43458.1 MG708275_p53 tail length tape-measure protein phrog_167 tail length tape measure protein tail -1 35513 40204
AUN43445.1 MG708275_p40 lysin phrog_4238 endolysin lysis -1 23298 23525
AUN43461.1 MG708275_p56 major tail protein singleton unknown function unknown function -1 40843 41118
AUN43406.1 MG708275_p1 tail assembly protein phrog_1217 tail protein tail -1 307 678
AUN43440.1 MG708275_p35 hypothetical protein singleton unknown function unknown function -1 21096 21218
AUN43426.1 MG708275_p21 hypothetical protein phrog_1174 unknown function unknown function -1 13481 13693
AUN43411.1 MG708275_p6 Clp protease-like protein phrog_94 head maturation protease head and packaging -1 2997 3665
AUN43412.1 MG708275_p7 portal protein phrog_12 portal protein head and packaging -1 3652 4812
AUN43439.1 MG708275_p34 hypothetical protein phrog_1022 unknown function unknown function -1 20965 21099
AUN43442.1 MG708275_p37 hypothetical protein phrog_11483 unknown function unknown function -1 21695 21910
AUN43425.1 MG708275_p20 DNA-binding protein phrog_1994 DNA binding protein DNA, RNA and nucleotide metabolism -1 12786 13475
AUN43420.1 MG708275_p15 hypothetical protein phrog_36 transcriptional regulator transcription regulation -1 10236 10634
AUN43418.1 MG708275_p13 terminase small subunit phrog_83 terminase small subunit head and packaging -1 8964 9425
AUN43416.1 MG708275_p11 hypothetical protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism -1 7802 8734
AUN43460.1 MG708275_p55 tail assembly protein phrog_1346 tail protein tail -1 40424 40777
AUN43413.1 MG708275_p8 hypothetical protein phrog_56 DNA methyltransferase other -1 4794 5714
AUN43438.1 MG708275_p33 hypothetical protein phrog_14808 unknown function unknown function -1 20516 20731
AUN43433.1 MG708275_p28 replication protein phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 16731 17546
AUN43409.1 MG708275_p4 DNA packaging protein phrog_40 head-tail adaptor Ad1 connector -1 1462 1776
AUN43410.1 MG708275_p5 capsid protein phrog_10 major head protein head and packaging -1 1791 2981
AUN43452.1 MG708275_p47 hypothetical protein phrog_1296 holin lysis -1 27557 27880
AUN43450.1 MG708275_p45 hypothetical protein phrog_6487 unknown function unknown function -1 26864 27316
AUN43407.1 MG708275_p2 tail assembly protein phrog_5 tail completion or Neck1 protein connector -1 683 1105
AUN43417.1 MG708275_p12 hypothetical protein phrog_3180 Arc-like repressor transcription regulation 1 8821 8952
AUN43441.1 MG708275_p36 cro-like protein phrog_3 transcriptional repressor transcription regulation -1 21259 21462
AUN43454.1 MG708275_p49 hypothetical protein phrog_1060 unknown function unknown function -1 28067 28408
AUN43408.1 MG708275_p3 capsid and scaffold protein phrog_25 head closure Hc1 connector -1 1112 1462
AUN43447.1 MG708275_p42 lysin phrog_998 endolysin lysis -1 24554 25156
AUN43435.1 MG708275_p30 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 18011 19291
AUN43430.1 MG708275_p25 hypothetical protein phrog_1982 unknown function unknown function -1 14384 14638
AUN43429.1 MG708275_p24 hypothetical protein phrog_803 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover -1 14256 14429
AUN43457.1 MG708275_p52 tail assembly protein phrog_202 distal tail protein Dit tail -1 33960 35516
AUN43453.1 MG708275_p48 hypothetical protein phrog_1567 unknown function unknown function -1 27895 28089
AUN43449.1 MG708275_p44 hypothetical protein phrog_4757 unknown function unknown function -1 26539 26850
AUN43437.1 MG708275_p32 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism -1 20003 20476
AUN43428.1 MG708275_p23 hypothetical protein phrog_1489 unknown function unknown function -1 14098 14259