| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG710528 |
Definition |
Escherichia phage GER2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Sepvirinae; Oslovirus; unclassified Oslovirus. |
DB of origin |
NUCCORE |
Length |
88114 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
88 |
%GC |
49.24 |
Number of singletons |
12 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVD99053.1 | MG710528_p44 | hypothetical protein | phrog_319 | NinB/ Orf homologous recombination mediator | DNA, RNA and nucleotide metabolism | 1 | 38006 | 38455 |
| AVD99085.1 | MG710528_p34 | KilR | phrog_294 | Kil protein for bacterial septation inhibition | other | -1 | 28481 | 28693 |
| AVD99021.1 | MG710528_p59 | lipopolysaccharide core heptose(II)-phosphate phosphatase | singleton | unknown function | unknown function | -1 | 46130 | 46402 |
| AVD99052.1 | MG710528_p43 | DNA primase | phrog_510 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 37035 | 38006 |
| AVD99044.1 | MG710528_p52 | hypothetical protein | phrog_494 | unknown function | unknown function | 1 | 43959 | 44138 |
| AVD99035.1 | MG710528_p15 | hypothetical protein | phrog_2379 | anti-repressor | transcription regulation | -1 | 18307 | 18621 |
| AVD99094.1 | MG710528_p26 | transposase | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 23661 | 24440 |
| AVD99038.1 | MG710528_p73 | tail fiber protein | phrog_1141 | tail fiber protein | tail | 1 | 60491 | 61063 |
| AVD99087.1 | MG710528_p37 | restriction endonuclease | phrog_1639 | restriction endonuclease | DNA, RNA and nucleotide metabolism | -1 | 31096 | 32049 |
| AVD99086.1 | MG710528_p35 | antitermination | phrog_1760 | anti-repressor | transcription regulation | -1 | 28764 | 29438 |
| AVD99062.1 | MG710528_p56 | hypothetical protein | phrog_34797 | unknown function | unknown function | 1 | 45212 | 45340 |
| AVD99060.1 | MG710528_p54 | holin lysis protein S | phrog_20 | holin | lysis | 1 | 44511 | 44717 |
| AVD99092.1 | MG710528_p86 | hypothetical protein | phrog_596 | unknown function | unknown function | 1 | 69784 | 70230 |
| AVD99072.1 | MG710528_p10 | hypothetical protein | phrog_1888 | unknown function | unknown function | -1 | 15674 | 16060 |
| AVD99046.1 | MG710528_p64 | hypothetical protein | phrog_479 | unknown function | unknown function | 1 | 52118 | 53125 |
| AVD99066.1 | MG710528_p70 | hypothetical protein | phrog_437 | virion structural protein | head and packaging | 1 | 57261 | 57824 |
| AVD99023.1 | MG710528_p75 | adhesin | phrog_9547 | unknown function | unknown function | 1 | 61543 | 62607 |
| AVD99047.1 | MG710528_p65 | hypothetical protein | phrog_334 | major head protein | head and packaging | 1 | 53148 | 54362 |
| AVD99057.1 | MG710528_p49 | Stx1B subunit | phrog_851 | Shiga toxin subunit B | moron, auxiliary metabolic gene and host takeover | 1 | 41109 | 41378 |
| AVD99058.1 | MG710528_p51 | mobile element protein | phrog_143 | unknown function | unknown function | 1 | 41883 | 43823 |
| AVD99050.1 | MG710528_p40 | hypothetical protein | phrog_35 | transcriptional repressor | transcription regulation | 1 | 34419 | 34622 |
| AVD99049.1 | MG710528_p83 | attachment invasion locus protein precursor | phrog_108 | Lom outer membrane protein | other | 1 | 67465 | 68202 |
| AVD99040.1 | MG710528_p36 | regulatory protein | phrog_995 | transcriptional regulator | transcription regulation | -1 | 29694 | 30341 |
| AVD99017.1 | MG710528_p50 | hypothetical protein | phrog_23494 | unknown function | unknown function | 1 | 41567 | 41728 |
| AVD99065.1 | MG710528_p63 | portal protein | phrog_156 | portal protein | head and packaging | 1 | 49816 | 51960 |
| AVD99042.1 | MG710528_p1 | integrasse | phrog_216 | integrase | integration and excision | 1 | 2691 | 3320 |
| AVD99076.1 | MG710528_p23 | hypothetical protein | phrog_1363 | unknown function | unknown function | -1 | 21824 | 22300 |
| AVD99063.1 | MG710528_p61 | DNA packaging protein | phrog_370 | terminase small subunit | head and packaging | 1 | 47314 | 48129 |
| AVD99075.1 | MG710528_p14 | antitermination | phrog_1760 | anti-repressor | transcription regulation | -1 | 17373 | 18041 |
| AVD99029.1 | MG710528_p22 | hypothetical protein | phrog_60 | unknown function | unknown function | -1 | 21053 | 21667 |
| AVD99070.1 | MG710528_p85 | hypothetical protein | phrog_611 | unknown function | unknown function | 1 | 69125 | 69781 |
| AVD99093.1 | MG710528_p25 | transposase | phrog_1157 | transposase | integration and excision | 1 | 22639 | 23661 |
| AVD99036.1 | MG710528_p19 | antirepressor protein | phrog_130 | anti-repressor Ant | transcription regulation | -1 | 19591 | 20373 |
| AVD99054.1 | MG710528_p45 | recombination endonuclease | phrog_171 | NinG/ Rap DNA junction specific endonuclease | DNA, RNA and nucleotide metabolism | 1 | 38463 | 39026 |
| AVD99024.1 | MG710528_p69 | hypothetical protein | phrog_482 | unknown function | unknown function | 1 | 56816 | 57277 |
| AVD99083.1 | MG710528_p32 | hypothetical protein | phrog_1050 | gam-like host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | -1 | 27886 | 28167 |
| AVD99095.1 | MG710528_p67 | transposase | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | -1 | 54919 | 55698 |
| AVD99020.1 | MG710528_p82 | hypothetical protein | singleton | unknown function | unknown function | 1 | 67331 | 67468 |
| AVD99015.1 | MG710528_p9 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 15413 | 15595 |
| AVD99027.1 | MG710528_p78 | hypothetical protein | phrog_511 | internal virion protein | head and packaging | 1 | 63529 | 65154 |
| AVD99033.1 | MG710528_p8 | integrase | singleton | unknown function | unknown function | 1 | 15190 | 15429 |
| AVD99051.1 | MG710528_p41 | hypothetical protein | phrog_1347 | unknown function | unknown function | 1 | 35154 | 35531 |
| AVD99028.1 | MG710528_p87 | hypothetical protein | phrog_594 | unknown function | unknown function | 1 | 70240 | 70491 |
| AVD99019.1 | MG710528_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 61238 | 61354 |
| AVD99059.1 | MG710528_p53 | hypothetical protein | phrog_311 | unknown function | unknown function | 1 | 44179 | 44424 |
| AVD99090.1 | MG710528_p66 | hypothetical protein | phrog_486 | virion structural protein | head and packaging | 1 | 54486 | 54806 |
| AVD99077.1 | MG710528_p24 | hypothetical protein | singleton | unknown function | unknown function | -1 | 22377 | 22499 |
| AVD99034.1 | MG710528_p18 | hypothetical protein | phrog_1381 | plasmid antitoxin with HTH domain | moron, auxiliary metabolic gene and host takeover | 1 | 19243 | 19548 |
| AVD99010.1 | MG710528_p12 | adenine methylase | phrog_359 | DNA methyltransferase | other | -1 | 16268 | 16894 |
| AVD99013.1 | MG710528_p57 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45476 | 45589 |
| AVD99096.1 | MG710528_p68 | transposase | phrog_1157 | transposase | integration and excision | -1 | 55698 | 56720 |
| AVD99081.1 | MG710528_p30 | endonuclease | phrog_149 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 26230 | 26922 |
| AVD99031.1 | MG710528_p21 | hypothetical protein | phrog_16281 | unknown function | unknown function | -1 | 20768 | 20890 |
| AVD99089.1 | MG710528_p39 | repressor CI | phrog_4 | transcriptional repressor | transcription regulation | -1 | 33610 | 34323 |
| AVD99045.1 | MG710528_p58 | outer lytic membrane protein | phrog_13 | Rz-like spanin | lysis | 1 | 45591 | 46049 |
| AVD99078.1 | MG710528_p27 | hypothetical protein | phrog_210 | unknown function | unknown function | -1 | 24450 | 25157 |
| AVD99080.1 | MG710528_p29 | hypothetical protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25643 | 26230 |
| AVD99018.1 | MG710528_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46553 | 46672 |
| AVD99079.1 | MG710528_p28 | hypothetical protein | phrog_204 | unknown function | unknown function | -1 | 25221 | 25568 |
| AVD99032.1 | MG710528_p6 | integrase | phrog_1 | integrase | integration and excision | 1 | 13483 | 14379 |
| AVD99071.1 | MG710528_p88 | hypothetical protein | phrog_601 | unknown function | unknown function | 1 | 70502 | 71767 |
| AVD99091.1 | MG710528_p81 | hypothetical protein | phrog_425 | membrane associated protein | moron, auxiliary metabolic gene and host takeover | 1 | 66721 | 67338 |
| AVD99041.1 | MG710528_p17 | plasmid maintenance system killer | phrog_3066 | toxin of TA system | moron, auxiliary metabolic gene and host takeover | 1 | 18965 | 19243 |
| AVD99012.1 | MG710528_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12245 | 12775 |
| AVD99011.1 | MG710528_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3639 | 4259 |
| AVD99030.1 | MG710528_p7 | InsA | phrog_1191 | transposase | integration and excision | -1 | 14736 | 14960 |
| AVD99055.1 | MG710528_p46 | hypothetical protein | phrog_268 | unknown function | unknown function | 1 | 39023 | 39217 |
| AVD99026.1 | MG710528_p76 | hypothetical protein | phrog_6585 | unknown function | unknown function | 1 | 62666 | 63166 |
| AVD99097.1 | MG710528_p47 | antitermination protein Q | phrog_79 | anti-termination protein Q-like | transcription regulation | 1 | 39210 | 39644 |
| AVD99084.1 | MG710528_p33 | hypothetical protein | phrog_1635 | unknown function | unknown function | -1 | 28188 | 28469 |
| AVD99056.1 | MG710528_p48 | Stx1A subunit | phrog_26077 | Shiga toxin subunit A | moron, auxiliary metabolic gene and host takeover | 1 | 40476 | 41099 |
| AVD99043.1 | MG710528_p20 | hypothetical protein | singleton | unknown function | unknown function | -1 | 20394 | 20672 |
| AVD99064.1 | MG710528_p62 | hypothetical protein | phrog_2 | terminase large subunit | head and packaging | 1 | 48110 | 49816 |
| AVD99039.1 | MG710528_p42 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 35525 | 37045 |
| AVD99025.1 | MG710528_p72 | tail fiber | phrog_366 | tail fiber protein | tail | 1 | 58471 | 60477 |
| AVD99037.1 | MG710528_p3 | long tail fiber proximal subunit | singleton | unknown function | unknown function | 1 | 4284 | 9539 |
| AVD99088.1 | MG710528_p38 | modification methylase | phrog_1600 | DNA methyltransferase | other | -1 | 32046 | 33515 |
| AVD99022.1 | MG710528_p4 | long tail fiber proximal subunit | phrog_15824 | tail fiber protein proximal subunit | tail | 1 | 9675 | 12197 |
| AVD99014.1 | MG710528_p77 | hypothetical protein | phrog_9340 | unknown function | unknown function | 1 | 63166 | 63348 |
| AVD99048.1 | MG710528_p79 | tail fiber protein | phrog_496 | tail fiber protein | tail | 1 | 65151 | 66419 |
| AVD99069.1 | MG710528_p84 | hypothetical protein | phrog_610 | unknown function | unknown function | 1 | 68632 | 69033 |
| AVD99016.1 | MG710528_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18895 | 19008 |
| AVD99067.1 | MG710528_p71 | hypothetical protein | phrog_399 | structural protein | head and packaging | 1 | 57824 | 58474 |
| AVD99068.1 | MG710528_p80 | outer membrane protein | phrog_557 | outer membrane protein | other | 1 | 66434 | 66715 |
| AVD99082.1 | MG710528_p31 | recombinase | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 26919 | 27869 |
| AVD99074.1 | MG710528_p13 | adenine methylase | phrog_1680 | unknown function | unknown function | -1 | 16891 | 17247 |
| AVD99073.1 | MG710528_p11 | hypothetical protein | phrog_292 | unknown function | unknown function | -1 | 16096 | 16290 |
| AVD99061.1 | MG710528_p55 | 1,4-beta-N-acetylmuramidase | phrog_7 | endolysin | lysis | 1 | 44722 | 45255 |