| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG711461 |
Definition |
Faecalibacterium phage FP_Lagaffe, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Lagaffevirus; Faecalibacterium virus Lagaffe. |
DB of origin |
NUCCORE |
Length |
48211 |
Host Name |
Faecalibacterium prausnitzii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
65 |
%GC |
55.9 |
Number of singletons |
1 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUV56389.1 | MG711461_p37 | integrase | phrog_4646 | transposase | integration and excision | 1 | 29349 | 30392 |
| AUV56391.1 | MG711461_p39 | hypothetical protein | phrog_17847 | unknown function | unknown function | 1 | 30796 | 31611 |
| AUV56383.1 | MG711461_p31 | endolysin, N-acetylmuramoyl-L-alanine amidase domain | phrog_20388 | endolysin | lysis | 1 | 25313 | 26896 |
| AUV56396.1 | MG711461_p44 | DNA ends protection protein | phrog_2205 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 34768 | 35424 |
| AUV56370.1 | MG711461_p18 | baseplate assembly protein | phrog_11 | baseplate spike | tail | 1 | 16711 | 17061 |
| AUV56354.1 | MG711461_p2 | terminase large subunit | phrog_15 | terminase large subunit | head and packaging | 1 | 646 | 2568 |
| AUV56407.1 | MG711461_p55 | hypothetical protein | phrog_1123 | unknown function | unknown function | 1 | 41556 | 41843 |
| AUV56398.1 | MG711461_p46 | single-stranded DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 36259 | 36660 |
| AUV56395.1 | MG711461_p43 | hypothetical protein | phrog_20011 | unknown function | unknown function | 1 | 34545 | 34796 |
| AUV56399.1 | MG711461_p47 | hypothetical protein | phrog_9474 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 36747 | 37613 |
| AUV56360.1 | MG711461_p8 | DNA/RNA binding domain-containing protein | phrog_3281 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 7437 | 7841 |
| AUV56416.1 | MG711461_p64 | RNA polymerase sigma factor | phrog_36 | transcriptional regulator | transcription regulation | 1 | 46493 | 46996 |
| AUV56388.1 | MG711461_p36 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 29026 | 29286 |
| AUV56365.1 | MG711461_p13 | major tail protein | phrog_55 | head closure | connector | 1 | 10655 | 11164 |
| AUV56406.1 | MG711461_p54 | DNA N-6-adenine-methyltransferase | phrog_6083 | DNA methylase | DNA, RNA and nucleotide metabolism | 1 | 41208 | 41501 |
| AUV56375.1 | MG711461_p23 | hypothetical protein | phrog_7177 | unknown function | unknown function | 1 | 20337 | 20648 |
| AUV56359.1 | MG711461_p7 | major capsid protein | phrog_29 | major head protein | head and packaging | 1 | 6333 | 7409 |
| AUV56387.1 | MG711461_p35 | hypothetical protein | phrog_17734 | unknown function | unknown function | 1 | 28819 | 28944 |
| AUV56415.1 | MG711461_p63 | adenine-specific methyltransferase | phrog_498 | DNA methyltransferase | other | 1 | 45132 | 46469 |
| AUV56380.1 | MG711461_p28 | reverse transcriptase | phrog_1423 | Reverse transcriptase | DNA, RNA and nucleotide metabolism | 1 | 23260 | 24573 |
| AUV56414.1 | MG711461_p62 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44988 | 45131 |
| AUV56367.1 | MG711461_p15 | tail length tape-measure protein | phrog_1272 | tail length tape measure protein | tail | 1 | 11765 | 15556 |
| AUV56408.1 | MG711461_p56 | DNA binding domain-containing protein | phrog_997 | replication terminator | DNA, RNA and nucleotide metabolism | 1 | 41848 | 42450 |
| AUV56397.1 | MG711461_p45 | ERF superfamily single-strand DNA annealing protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 35436 | 36266 |
| AUV56381.1 | MG711461_p29 | hypothetical protein | phrog_9428 | unknown function | unknown function | 1 | 24552 | 24908 |
| AUV56409.1 | MG711461_p57 | replication terminator protein | phrog_1029 | unknown function | unknown function | 1 | 42464 | 43207 |
| AUV56393.1 | MG711461_p41 | exonuclease | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 33053 | 33787 |
| AUV56372.1 | MG711461_p20 | baseplate protein | phrog_15729 | baseplate protein | tail | 1 | 17773 | 18054 |
| AUV56376.1 | MG711461_p24 | hypothetical protein | phrog_9010 | unknown function | unknown function | 1 | 20669 | 21094 |
| AUV56390.1 | MG711461_p38 | DNA binding domain-containing protein | phrog_11420 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30456 | 30776 |
| AUV56355.1 | MG711461_p3 | adaptor protein | phrog_118 | head-tail adaptor | connector | 1 | 2581 | 2847 |
| AUV56412.1 | MG711461_p60 | hypothetical protein | phrog_21100 | unknown function | unknown function | 1 | 44069 | 44431 |
| AUV56357.1 | MG711461_p5 | Clp protease-like protein | phrog_53 | head maturation protease | head and packaging | 1 | 4655 | 5905 |
| AUV56363.1 | MG711461_p11 | hypothetical protein | phrog_2581 | virion structural protein | head and packaging | 1 | 8528 | 9157 |
| AUV56400.1 | MG711461_p48 | hypothetical protein | phrog_9804 | unknown function | unknown function | 1 | 37610 | 38293 |
| AUV56384.1 | MG711461_p32 | holin | phrog_13712 | holin | lysis | 1 | 27053 | 27580 |
| AUV56366.1 | MG711461_p14 | tail protein | phrog_166 | tail protein | tail | 1 | 11240 | 11647 |
| AUV56401.1 | MG711461_p49 | SAM-dependent methyltransferase | phrog_67 | DNA methyltransferase | other | 1 | 38290 | 39180 |
| AUV56386.1 | MG711461_p34 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 28411 | 28659 |
| AUV56374.1 | MG711461_p22 | baseplate P2 I-like protein | phrog_14404 | baseplate protein | tail | 1 | 19412 | 20317 |
| AUV56358.1 | MG711461_p6 | head decoration protein | phrog_49 | head decoration | head and packaging | 1 | 5905 | 6312 |
| AUV56353.1 | MG711461_p1 | terminase small subunit | phrog_57 | terminase small subunit | head and packaging | 1 | 84 | 662 |
| AUV56402.1 | MG711461_p50 | MazF family toxin | phrog_1936 | MazF-like growth inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 39177 | 39686 |
| AUV56371.1 | MG711461_p19 | tail assembly protein | phrog_15956 | tail assembly protein | tail | 1 | 17074 | 17760 |
| AUV56411.1 | MG711461_p59 | hypothetical protein | phrog_17337 | unknown function | unknown function | 1 | 43444 | 44085 |
| AUV56403.1 | MG711461_p51 | deoxyribosyltransferase | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 39683 | 40222 |
| AUV56394.1 | MG711461_p42 | hypothetical protein | phrog_18750 | unknown function | unknown function | 1 | 33793 | 34548 |
| AUV56368.1 | MG711461_p16 | hypothetical protein | phrog_46 | baseplate hub | tail | 1 | 15549 | 15797 |
| AUV56417.1 | MG711461_p65 | neck protein | phrog_27 | tail completion or Neck1 protein | connector | 1 | 47278 | 47970 |
| AUV56378.1 | MG711461_p26 | BPP-1 major tropism-determinant-like protein | phrog_2889 | unknown function | unknown function | 1 | 21487 | 22584 |
| AUV56373.1 | MG711461_p21 | baseplate P2 J-like protein | phrog_6 | baseplate wedge subunit | tail | 1 | 18051 | 19397 |
| AUV56356.1 | MG711461_p4 | portal protein | phrog_21 | portal protein | head and packaging | 1 | 2956 | 4650 |
| AUV56385.1 | MG711461_p33 | hypothetical protein | phrog_20233 | unknown function | unknown function | -1 | 27646 | 28284 |
| AUV56369.1 | MG711461_p17 | tail protein | phrog_52 | tail protein | tail | 1 | 15794 | 16711 |
| AUV56410.1 | MG711461_p58 | hypothetical protein | phrog_20576 | unknown function | unknown function | 1 | 43281 | 43430 |
| AUV56379.1 | MG711461_p27 | Avd-like protein | phrog_3206 | Avd protein of DGR | DNA, RNA and nucleotide metabolism | 1 | 22656 | 23000 |
| AUV56382.1 | MG711461_p30 | hypothetical protein | phrog_17876 | unknown function | unknown function | 1 | 24921 | 25301 |
| AUV56405.1 | MG711461_p53 | hypothetical protein | phrog_18743 | unknown function | unknown function | 1 | 40824 | 41051 |
| AUV56364.1 | MG711461_p12 | tail sheath protein | phrog_23 | tail sheath | tail | 1 | 9171 | 10640 |
| AUV56361.1 | MG711461_p9 | DNA/RNA binding domain-containing protein | phrog_3281 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 7855 | 8181 |
| AUV56362.1 | MG711461_p10 | head closure protein | phrog_2551 | minor tail protein | tail | 1 | 8186 | 8512 |
| AUV56413.1 | MG711461_p61 | hypothetical protein | phrog_19829 | unknown function | unknown function | 1 | 44421 | 44984 |
| AUV56404.1 | MG711461_p52 | holliday junction resolvase | phrog_843 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 40219 | 40827 |
| AUV56377.1 | MG711461_p25 | hypothetical protein | phrog_8734 | unknown function | unknown function | 1 | 21098 | 21466 |
| AUV56392.1 | MG711461_p40 | formylglycine-generating enzyme domain-contaning protein | phrog_2889 | unknown function | unknown function | 1 | 31798 | 33060 |