Genomic map of Ralstonia phage RsoP1EGY (MG711516)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG711516
Definition
Ralstonia phage RsoP1EGY, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Gyeongsanvirus; Ralstonia virus RsoP1EGY.
DB of origin
NUCCORE
Length
41297
Host Name
Ralstonia solanacearum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
50
%GC
58.97
Number of singletons
18
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUO78171.1 MG711516_p8 hypothetical protein singleton unknown function unknown function 1 11377 11544
AUO78174.1 MG711516_p13 hypothetical protein singleton unknown function unknown function 1 12993 13265
AUO78165.1 MG711516_p1 hypothetical protein singleton unknown function unknown function 1 39 197
AUO78189.1 MG711516_p29 hypothetical protein singleton unknown function unknown function -1 24825 25034
AUO78168.1 MG711516_p5 hypothetical protein phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 8371 8865
AUO78195.1 MG711516_p36 hypothetical protein singleton unknown function unknown function 1 28994 29263
AUO78178.1 MG711516_p17 hypothetical protein singleton unknown function unknown function 1 14836 15036
AUO78167.1 MG711516_p3 hypothetical protein phrog_19253 unknown function unknown function 1 5224 7662
AUO78210.1 MG711516_p30 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 25107 26948
AUO78170.1 MG711516_p7 hypothetical protein singleton unknown function unknown function -1 10851 11111
AUO78169.1 MG711516_p4 hypothetical protein phrog_891 terminase small subunit head and packaging 1 7969 8271
AUO78194.1 MG711516_p35 hypothetical protein phrog_2252 endolysin; inhibits RNA polymerase lysis 1 28557 28997
AUO78197.1 MG711516_p39 hypothetical protein phrog_1052 head assembly head and packaging 1 31711 32469
AUO78204.1 MG711516_p46 hypothetical protein phrog_446 tail protein tail 1 35139 35726
AUO78185.1 MG711516_p25 hypothetical protein phrog_822 amidase lysis 1 21423 21875
AUO78206.1 MG711516_p49 hypothetical protein phrog_805 internal virion protein head and packaging 1 38530 39096
AUO78202.1 MG711516_p44 hypothetical protein singleton unknown function unknown function -1 34203 34442
AUO78163.1 MG711516_p10 hypothetical protein singleton unknown function unknown function -1 12458 12664
AUO78166.1 MG711516_p2 hypothetical protein phrog_342 internal virion protein with endolysin domain head and packaging 1 197 4918
AUO78191.1 MG711516_p32 hypothetical protein phrog_1233 unknown function unknown function 1 27184 27498
AUO78187.1 MG711516_p27 hypothetical protein phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 22488 24146
AUO78199.1 MG711516_p41 hypothetical protein phrog_27239 major head protein head and packaging 1 33104 33271
AUO78177.1 MG711516_p16 hypothetical protein singleton unknown function unknown function -1 14562 14786
AUO78183.1 MG711516_p23 hypothetical protein phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 20499 21017
AUO78192.1 MG711516_p33 hypothetical protein phrog_22241 unknown function unknown function 1 27498 27761
AUO78186.1 MG711516_p26 hypothetical protein phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 22112 22552
AUO78188.1 MG711516_p28 hypothetical protein phrog_1614 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 24419 24916
AUO78208.1 MG711516_p6 terminase protein large subunit phrog_38 terminase large subunit head and packaging 1 8855 10540
AUO78184.1 MG711516_p24 hypothetical protein phrog_2633 endonuclease VII DNA, RNA and nucleotide metabolism 1 21014 21505
AUO78207.1 MG711516_p50 hypothetical protein phrog_23202 internal virion protein head and packaging 1 39097 41241
AUO78176.1 MG711516_p15 hypothetical protein singleton unknown function unknown function -1 14337 14534
AUO78173.1 MG711516_p11 hypothetical protein singleton unknown function unknown function 1 12473 12661
AUO78211.1 MG711516_p38 tail protein phrog_449 head-tail adaptor connector 1 29947 31506
AUO78172.1 MG711516_p9 hypothetical protein phrog_11722 unknown function unknown function 1 12037 12396
AUO78205.1 MG711516_p48 hypothetical protein phrog_308 internal virion protein head and packaging 1 38057 38530
AUO78209.1 MG711516_p20 DNA-dependent RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 16638 19184
AUO78196.1 MG711516_p37 hypothetical protein singleton unknown function unknown function 1 29734 29934
AUO78164.1 MG711516_p12 hypothetical protein singleton unknown function unknown function 1 12663 12905
AUO78193.1 MG711516_p34 hypothetical protein phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 27742 28482
AUO78201.1 MG711516_p43 hypothetical protein singleton unknown function unknown function 1 33944 34234
AUO78198.1 MG711516_p40 hypothetical protein phrog_28107 unknown function unknown function 1 32479 32868
AUO78203.1 MG711516_p45 hypothetical protein singleton unknown function unknown function -1 34793 35122
AUO78200.1 MG711516_p42 hypothetical protein phrog_2633 endonuclease VII DNA, RNA and nucleotide metabolism 1 33281 33751
AUO78179.1 MG711516_p18 hypothetical protein phrog_1 integrase integration and excision 1 15131 16204
AUO78212.1 MG711516_p47 tail protein phrog_457 tail protein tail 1 35728 38082
AUO78175.1 MG711516_p14 hypothetical protein singleton unknown function unknown function 1 13950 14279
AUO78181.1 MG711516_p21 hypothetical protein phrog_3322 endonuclease DNA, RNA and nucleotide metabolism 1 19212 19652
AUO78190.1 MG711516_p31 hypothetical protein phrog_1334 unknown function unknown function 1 26966 27187
AUO78180.1 MG711516_p19 hypothetical protein singleton unknown function unknown function 1 16179 16403
AUO78182.1 MG711516_p22 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 19922 20611