| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG711516 |
Definition |
Ralstonia phage RsoP1EGY, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Gyeongsanvirus; Ralstonia virus RsoP1EGY. |
DB of origin |
NUCCORE |
Length |
41297 |
Host Name |
Ralstonia solanacearum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
50 |
%GC |
58.97 |
Number of singletons |
18 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUO78171.1 | MG711516_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11377 | 11544 |
| AUO78174.1 | MG711516_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12993 | 13265 |
| AUO78165.1 | MG711516_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39 | 197 |
| AUO78189.1 | MG711516_p29 | hypothetical protein | singleton | unknown function | unknown function | -1 | 24825 | 25034 |
| AUO78168.1 | MG711516_p5 | hypothetical protein | phrog_1035 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 8371 | 8865 |
| AUO78195.1 | MG711516_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28994 | 29263 |
| AUO78178.1 | MG711516_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14836 | 15036 |
| AUO78167.1 | MG711516_p3 | hypothetical protein | phrog_19253 | unknown function | unknown function | 1 | 5224 | 7662 |
| AUO78210.1 | MG711516_p30 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 25107 | 26948 |
| AUO78170.1 | MG711516_p7 | hypothetical protein | singleton | unknown function | unknown function | -1 | 10851 | 11111 |
| AUO78169.1 | MG711516_p4 | hypothetical protein | phrog_891 | terminase small subunit | head and packaging | 1 | 7969 | 8271 |
| AUO78194.1 | MG711516_p35 | hypothetical protein | phrog_2252 | endolysin; inhibits RNA polymerase | lysis | 1 | 28557 | 28997 |
| AUO78197.1 | MG711516_p39 | hypothetical protein | phrog_1052 | head assembly | head and packaging | 1 | 31711 | 32469 |
| AUO78204.1 | MG711516_p46 | hypothetical protein | phrog_446 | tail protein | tail | 1 | 35139 | 35726 |
| AUO78185.1 | MG711516_p25 | hypothetical protein | phrog_822 | amidase | lysis | 1 | 21423 | 21875 |
| AUO78206.1 | MG711516_p49 | hypothetical protein | phrog_805 | internal virion protein | head and packaging | 1 | 38530 | 39096 |
| AUO78202.1 | MG711516_p44 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34203 | 34442 |
| AUO78163.1 | MG711516_p10 | hypothetical protein | singleton | unknown function | unknown function | -1 | 12458 | 12664 |
| AUO78166.1 | MG711516_p2 | hypothetical protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 197 | 4918 |
| AUO78191.1 | MG711516_p32 | hypothetical protein | phrog_1233 | unknown function | unknown function | 1 | 27184 | 27498 |
| AUO78187.1 | MG711516_p27 | hypothetical protein | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 22488 | 24146 |
| AUO78199.1 | MG711516_p41 | hypothetical protein | phrog_27239 | major head protein | head and packaging | 1 | 33104 | 33271 |
| AUO78177.1 | MG711516_p16 | hypothetical protein | singleton | unknown function | unknown function | -1 | 14562 | 14786 |
| AUO78183.1 | MG711516_p23 | hypothetical protein | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 20499 | 21017 |
| AUO78192.1 | MG711516_p33 | hypothetical protein | phrog_22241 | unknown function | unknown function | 1 | 27498 | 27761 |
| AUO78186.1 | MG711516_p26 | hypothetical protein | phrog_1035 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 22112 | 22552 |
| AUO78188.1 | MG711516_p28 | hypothetical protein | phrog_1614 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | 1 | 24419 | 24916 |
| AUO78208.1 | MG711516_p6 | terminase protein large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 8855 | 10540 |
| AUO78184.1 | MG711516_p24 | hypothetical protein | phrog_2633 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 21014 | 21505 |
| AUO78207.1 | MG711516_p50 | hypothetical protein | phrog_23202 | internal virion protein | head and packaging | 1 | 39097 | 41241 |
| AUO78176.1 | MG711516_p15 | hypothetical protein | singleton | unknown function | unknown function | -1 | 14337 | 14534 |
| AUO78173.1 | MG711516_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12473 | 12661 |
| AUO78211.1 | MG711516_p38 | tail protein | phrog_449 | head-tail adaptor | connector | 1 | 29947 | 31506 |
| AUO78172.1 | MG711516_p9 | hypothetical protein | phrog_11722 | unknown function | unknown function | 1 | 12037 | 12396 |
| AUO78205.1 | MG711516_p48 | hypothetical protein | phrog_308 | internal virion protein | head and packaging | 1 | 38057 | 38530 |
| AUO78209.1 | MG711516_p20 | DNA-dependent RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 16638 | 19184 |
| AUO78196.1 | MG711516_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29734 | 29934 |
| AUO78164.1 | MG711516_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12663 | 12905 |
| AUO78193.1 | MG711516_p34 | hypothetical protein | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 27742 | 28482 |
| AUO78201.1 | MG711516_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33944 | 34234 |
| AUO78198.1 | MG711516_p40 | hypothetical protein | phrog_28107 | unknown function | unknown function | 1 | 32479 | 32868 |
| AUO78203.1 | MG711516_p45 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34793 | 35122 |
| AUO78200.1 | MG711516_p42 | hypothetical protein | phrog_2633 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 33281 | 33751 |
| AUO78179.1 | MG711516_p18 | hypothetical protein | phrog_1 | integrase | integration and excision | 1 | 15131 | 16204 |
| AUO78212.1 | MG711516_p47 | tail protein | phrog_457 | tail protein | tail | 1 | 35728 | 38082 |
| AUO78175.1 | MG711516_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13950 | 14279 |
| AUO78181.1 | MG711516_p21 | hypothetical protein | phrog_3322 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 19212 | 19652 |
| AUO78190.1 | MG711516_p31 | hypothetical protein | phrog_1334 | unknown function | unknown function | 1 | 26966 | 27187 |
| AUO78180.1 | MG711516_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16179 | 16403 |
| AUO78182.1 | MG711516_p22 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 19922 | 20611 |