| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG727698 |
Definition |
Paenibacillus phage PBL1c, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Sitaravirus; unclassified Sitaravirus. |
DB of origin |
NUCCORE |
Length |
40611 |
Host Name |
Paenibacillus larvae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
79 |
%GC |
41.24 |
Number of singletons |
6 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUS03500.1 | MG727698_p27 | hypothetical protein | phrog_15378 | unknown function | unknown function | 1 | 16972 | 17496 |
| AUS03510.1 | MG727698_p42 | antirepressor | phrog_373 | anti-repressor | transcription regulation | 1 | 22332 | 23072 |
| AUS03478.1 | MG727698_p4 | Clp protease | phrog_94 | head maturation protease | head and packaging | 1 | 3309 | 4025 |
| AUS03495.1 | MG727698_p21 | N-acetylmuramoyl-L-alanine amidase | phrog_3088 | amidase | lysis | 1 | 14215 | 14886 |
| AUS03542.1 | MG727698_p74 | antitoxin | phrog_497 | toxin-antitoxin system HicB-like | moron, auxiliary metabolic gene and host takeover | -1 | 38330 | 38740 |
| AUS03520.1 | MG727698_p52 | DNA recombination protein | phrog_2780 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 27370 | 28278 |
| AUS03533.1 | MG727698_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33645 | 33851 |
| AUS03480.1 | MG727698_p6 | hypothetical protein | phrog_6793 | unknown function | unknown function | 1 | 5130 | 5312 |
| AUS03548.1 | MG727698_p29 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17854 | 18033 |
| AUS03505.1 | MG727698_p33 | transposase/integrase | phrog_157 | transposase | integration and excision | -1 | 19259 | 20089 |
| AUS03512.1 | MG727698_p44 | hypothetical protein | phrog_12380 | unknown function | unknown function | 1 | 23362 | 23610 |
| AUS03491.1 | MG727698_p17 | tail protein | phrog_5339 | virion structural protein | head and packaging | 1 | 12410 | 13492 |
| AUS03511.1 | MG727698_p43 | hypothetical protein | phrog_12765 | unknown function | unknown function | 1 | 23099 | 23317 |
| AUS03476.1 | MG727698_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 345 | 2069 |
| AUS03508.1 | MG727698_p39 | helix-turn-helix domain Cro/C1 family transcriptional regulator | phrog_925 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 21748 | 22005 |
| AUS03509.1 | MG727698_p41 | hypothetical protein | phrog_13096 | unknown function | unknown function | 1 | 22151 | 22306 |
| AUS03537.1 | MG727698_p69 | hypothetical protein | phrog_5494 | unknown function | unknown function | 1 | 35125 | 35583 |
| AUS03482.1 | MG727698_p8 | head-tail connector complex protein | phrog_25 | head closure Hc1 | connector | 1 | 5565 | 5888 |
| AUS03545.1 | MG727698_p78 | transglycosylase | phrog_1315 | unknown function | unknown function | 1 | 39956 | 40222 |
| AUS03499.1 | MG727698_p26 | amidase domain-containing protein | phrog_15561 | peptidase | other | 1 | 16229 | 16936 |
| AUS03498.1 | MG727698_p25 | hypothetical protein | phrog_14782 | unknown function | unknown function | 1 | 16122 | 16232 |
| AUS03541.1 | MG727698_p73 | phosphomannomutase | phrog_1454 | unknown function | unknown function | 1 | 38098 | 38301 |
| AUS03539.1 | MG727698_p71 | hypothetical protein | phrog_15506 | unknown function | unknown function | 1 | 36104 | 36385 |
| AUS03493.1 | MG727698_p19 | hypothetical protein | phrog_134 | unknown function | unknown function | 1 | 13837 | 13998 |
| AUS03530.1 | MG727698_p62 | hypothetical protein | phrog_30569 | unknown function | unknown function | 1 | 32845 | 33153 |
| AUS03531.1 | MG727698_p63 | hypothetical protein | phrog_18759 | unknown function | unknown function | 1 | 33160 | 33483 |
| AUS03488.1 | MG727698_p14 | tail tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 7808 | 10444 |
| AUS03526.1 | MG727698_p58 | hypothetical protein | phrog_25160 | unknown function | unknown function | 1 | 31815 | 31964 |
| AUS03477.1 | MG727698_p3 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2066 | 3319 |
| AUS03515.1 | MG727698_p47 | hypothetical protein | phrog_12825 | unknown function | unknown function | 1 | 24661 | 25140 |
| AUS03528.1 | MG727698_p60 | protein YopX | phrog_98 | unknown function | unknown function | 1 | 32246 | 32632 |
| AUS03540.1 | MG727698_p72 | serine recombinase | phrog_95 | integrase | integration and excision | 1 | 36324 | 37886 |
| AUS03489.1 | MG727698_p15 | tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 10441 | 11292 |
| AUS03546.1 | MG727698_p79 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 40219 | 40557 |
| AUS03517.1 | MG727698_p49 | hypothetical protein | phrog_8288 | unknown function | unknown function | 1 | 25383 | 25673 |
| AUS03490.1 | MG727698_p16 | tail protein | phrog_538 | minor tail protein | tail | 1 | 11295 | 12413 |
| AUS03529.1 | MG727698_p61 | hypothetical protein | phrog_33780 | unknown function | unknown function | 1 | 32625 | 32840 |
| AUS03483.1 | MG727698_p9 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 5888 | 6316 |
| AUS03506.1 | MG727698_p34 | transposase | phrog_151 | transposase | integration and excision | -1 | 20095 | 20376 |
| AUS03487.1 | MG727698_p13 | hypothetical protein | phrog_7848 | unknown function | unknown function | 1 | 7496 | 7750 |
| AUS03535.1 | MG727698_p67 | hypothetical protein | phrog_6998 | unknown function | unknown function | 1 | 34200 | 34412 |
| AUS03484.1 | MG727698_p10 | tail protein | phrog_176 | tail terminator | connector | 1 | 6300 | 6695 |
| AUS03481.1 | MG727698_p7 | head-tail connector complex protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 5305 | 5568 |
| AUS03532.1 | MG727698_p64 | hypothetical protein | phrog_19268 | unknown function | unknown function | 1 | 33476 | 33652 |
| AUS03549.1 | MG727698_p35 | hypothetical protein | phrog_35277 | unknown function | unknown function | -1 | 20345 | 20590 |
| AUS03523.1 | MG727698_p55 | primosome component-like protein | phrog_2514 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 29374 | 30204 |
| AUS03514.1 | MG727698_p46 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 23906 | 24664 |
| AUS03494.1 | MG727698_p20 | holin | phrog_2429 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 13979 | 14218 |
| AUS03525.1 | MG727698_p57 | hypothetical protein | phrog_6868 | unknown function | unknown function | 1 | 31489 | 31800 |
| AUS03543.1 | MG727698_p75 | toxin | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | -1 | 38771 | 38974 |
| AUS03503.1 | MG727698_p31 | hypothetical protein | phrog_8263 | unknown function | unknown function | -1 | 18159 | 18707 |
| AUS03550.1 | MG727698_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20659 | 20772 |
| AUS03516.1 | MG727698_p48 | hypothetical protein | phrog_8406 | unknown function | unknown function | 1 | 25115 | 25378 |
| AUS03538.1 | MG727698_p70 | transcriptional regulator | phrog_248 | transcriptional activator | transcription regulation | 1 | 35634 | 36092 |
| AUS03534.1 | MG727698_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33848 | 34210 |
| AUS03536.1 | MG727698_p68 | holliday junction resolvase | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 34409 | 34966 |
| AUS03518.1 | MG727698_p50 | DNA repair protein | phrog_1499 | unknown function | unknown function | 1 | 25657 | 27189 |
| AUS03552.1 | MG727698_p40 | hypothetical protein | phrog_26855 | unknown function | unknown function | 1 | 22015 | 22137 |
| AUS03507.1 | MG727698_p38 | helix-turn-helix domain XRE family transcriptional regulator | phrog_8 | transcriptional regulator | transcription regulation | -1 | 21085 | 21531 |
| AUS03522.1 | MG727698_p54 | hypothetical protein | phrog_7503 | unknown function | unknown function | 1 | 29046 | 29360 |
| AUS03502.1 | MG727698_p30 | hypothetical protein | phrog_3374 | unknown function | unknown function | -1 | 17990 | 18157 |
| AUS03513.1 | MG727698_p45 | hypothetical protein | phrog_9497 | unknown function | unknown function | 1 | 23607 | 23879 |
| AUS03497.1 | MG727698_p23 | hypothetical protein | phrog_9393 | unknown function | unknown function | 1 | 15279 | 15440 |
| AUS03504.1 | MG727698_p32 | YoID-like protein | phrog_8703 | unknown function | unknown function | 1 | 18948 | 19202 |
| AUS03485.1 | MG727698_p11 | major tail protein | phrog_1407 | major tail protein | tail | 1 | 6697 | 7134 |
| AUS03486.1 | MG727698_p12 | hypothetical protein | phrog_7902 | unknown function | unknown function | 1 | 7131 | 7469 |
| AUS03524.1 | MG727698_p56 | replicative DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 30170 | 31492 |
| AUS03479.1 | MG727698_p5 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4022 | 5152 |
| AUS03553.1 | MG727698_p76 | hypothetical protein | singleton | unknown function | unknown function | -1 | 39075 | 39212 |
| AUS03544.1 | MG727698_p77 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39570 | 39746 |
| AUS03475.1 | MG727698_p1 | terminase small subunit | phrog_361 | terminase small subunit | head and packaging | 1 | 50 | 364 |
| AUS03521.1 | MG727698_p53 | MBL fold metallo-hydrolase | phrog_392 | metal-dependent hydrolase | other | 1 | 28291 | 29049 |
| AUS03496.1 | MG727698_p22 | holin | phrog_1299 | holin | lysis | 1 | 14896 | 15138 |
| AUS03492.1 | MG727698_p18 | hypothetical protein | phrog_6220 | unknown function | unknown function | 1 | 13493 | 13840 |
| AUS03527.1 | MG727698_p59 | hypothetical protein | phrog_19477 | unknown function | unknown function | 1 | 32014 | 32220 |
| AUS03551.1 | MG727698_p37 | antirepressor | phrog_33133 | anti-repressor | transcription regulation | 1 | 20847 | 21182 |
| AUS03547.1 | MG727698_p24 | hypothetical protein | phrog_14009 | unknown function | unknown function | -1 | 15849 | 15974 |
| AUS03501.1 | MG727698_p28 | hypothetical protein | phrog_24293 | unknown function | unknown function | 1 | 17661 | 17813 |
| AUS03519.1 | MG727698_p51 | hypothetical protein | phrog_5189 | unknown function | unknown function | 1 | 27176 | 27373 |