Genomic map of Paenibacillus phage PBL1c (MG727698)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG727698
Definition
Paenibacillus phage PBL1c, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Sitaravirus; unclassified Sitaravirus.
DB of origin
NUCCORE
Length
40611
Host Name
Paenibacillus larvae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
79
%GC
41.24
Number of singletons
6
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUS03500.1 MG727698_p27 hypothetical protein phrog_15378 unknown function unknown function 1 16972 17496
AUS03510.1 MG727698_p42 antirepressor phrog_373 anti-repressor transcription regulation 1 22332 23072
AUS03478.1 MG727698_p4 Clp protease phrog_94 head maturation protease head and packaging 1 3309 4025
AUS03495.1 MG727698_p21 N-acetylmuramoyl-L-alanine amidase phrog_3088 amidase lysis 1 14215 14886
AUS03542.1 MG727698_p74 antitoxin phrog_497 toxin-antitoxin system HicB-like moron, auxiliary metabolic gene and host takeover -1 38330 38740
AUS03520.1 MG727698_p52 DNA recombination protein phrog_2780 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 27370 28278
AUS03533.1 MG727698_p65 hypothetical protein singleton unknown function unknown function 1 33645 33851
AUS03480.1 MG727698_p6 hypothetical protein phrog_6793 unknown function unknown function 1 5130 5312
AUS03548.1 MG727698_p29 hypothetical protein singleton unknown function unknown function 1 17854 18033
AUS03505.1 MG727698_p33 transposase/integrase phrog_157 transposase integration and excision -1 19259 20089
AUS03512.1 MG727698_p44 hypothetical protein phrog_12380 unknown function unknown function 1 23362 23610
AUS03491.1 MG727698_p17 tail protein phrog_5339 virion structural protein head and packaging 1 12410 13492
AUS03511.1 MG727698_p43 hypothetical protein phrog_12765 unknown function unknown function 1 23099 23317
AUS03476.1 MG727698_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 345 2069
AUS03508.1 MG727698_p39 helix-turn-helix domain Cro/C1 family transcriptional regulator phrog_925 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 21748 22005
AUS03509.1 MG727698_p41 hypothetical protein phrog_13096 unknown function unknown function 1 22151 22306
AUS03537.1 MG727698_p69 hypothetical protein phrog_5494 unknown function unknown function 1 35125 35583
AUS03482.1 MG727698_p8 head-tail connector complex protein phrog_25 head closure Hc1 connector 1 5565 5888
AUS03545.1 MG727698_p78 transglycosylase phrog_1315 unknown function unknown function 1 39956 40222
AUS03499.1 MG727698_p26 amidase domain-containing protein phrog_15561 peptidase other 1 16229 16936
AUS03498.1 MG727698_p25 hypothetical protein phrog_14782 unknown function unknown function 1 16122 16232
AUS03541.1 MG727698_p73 phosphomannomutase phrog_1454 unknown function unknown function 1 38098 38301
AUS03539.1 MG727698_p71 hypothetical protein phrog_15506 unknown function unknown function 1 36104 36385
AUS03493.1 MG727698_p19 hypothetical protein phrog_134 unknown function unknown function 1 13837 13998
AUS03530.1 MG727698_p62 hypothetical protein phrog_30569 unknown function unknown function 1 32845 33153
AUS03531.1 MG727698_p63 hypothetical protein phrog_18759 unknown function unknown function 1 33160 33483
AUS03488.1 MG727698_p14 tail tape measure protein phrog_58 tail length tape measure protein tail 1 7808 10444
AUS03526.1 MG727698_p58 hypothetical protein phrog_25160 unknown function unknown function 1 31815 31964
AUS03477.1 MG727698_p3 portal protein phrog_12 portal protein head and packaging 1 2066 3319
AUS03515.1 MG727698_p47 hypothetical protein phrog_12825 unknown function unknown function 1 24661 25140
AUS03528.1 MG727698_p60 protein YopX phrog_98 unknown function unknown function 1 32246 32632
AUS03540.1 MG727698_p72 serine recombinase phrog_95 integrase integration and excision 1 36324 37886
AUS03489.1 MG727698_p15 tail protein phrog_33 distal tail protein Dit tail 1 10441 11292
AUS03546.1 MG727698_p79 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 40219 40557
AUS03517.1 MG727698_p49 hypothetical protein phrog_8288 unknown function unknown function 1 25383 25673
AUS03490.1 MG727698_p16 tail protein phrog_538 minor tail protein tail 1 11295 12413
AUS03529.1 MG727698_p61 hypothetical protein phrog_33780 unknown function unknown function 1 32625 32840
AUS03483.1 MG727698_p9 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 5888 6316
AUS03506.1 MG727698_p34 transposase phrog_151 transposase integration and excision -1 20095 20376
AUS03487.1 MG727698_p13 hypothetical protein phrog_7848 unknown function unknown function 1 7496 7750
AUS03535.1 MG727698_p67 hypothetical protein phrog_6998 unknown function unknown function 1 34200 34412
AUS03484.1 MG727698_p10 tail protein phrog_176 tail terminator connector 1 6300 6695
AUS03481.1 MG727698_p7 head-tail connector complex protein phrog_40 head-tail adaptor Ad1 connector 1 5305 5568
AUS03532.1 MG727698_p64 hypothetical protein phrog_19268 unknown function unknown function 1 33476 33652
AUS03549.1 MG727698_p35 hypothetical protein phrog_35277 unknown function unknown function -1 20345 20590
AUS03523.1 MG727698_p55 primosome component-like protein phrog_2514 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 29374 30204
AUS03514.1 MG727698_p46 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 23906 24664
AUS03494.1 MG727698_p20 holin phrog_2429 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 13979 14218
AUS03525.1 MG727698_p57 hypothetical protein phrog_6868 unknown function unknown function 1 31489 31800
AUS03543.1 MG727698_p75 toxin phrog_353 toxin moron, auxiliary metabolic gene and host takeover -1 38771 38974
AUS03503.1 MG727698_p31 hypothetical protein phrog_8263 unknown function unknown function -1 18159 18707
AUS03550.1 MG727698_p36 hypothetical protein singleton unknown function unknown function 1 20659 20772
AUS03516.1 MG727698_p48 hypothetical protein phrog_8406 unknown function unknown function 1 25115 25378
AUS03538.1 MG727698_p70 transcriptional regulator phrog_248 transcriptional activator transcription regulation 1 35634 36092
AUS03534.1 MG727698_p66 hypothetical protein singleton unknown function unknown function 1 33848 34210
AUS03536.1 MG727698_p68 holliday junction resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 34409 34966
AUS03518.1 MG727698_p50 DNA repair protein phrog_1499 unknown function unknown function 1 25657 27189
AUS03552.1 MG727698_p40 hypothetical protein phrog_26855 unknown function unknown function 1 22015 22137
AUS03507.1 MG727698_p38 helix-turn-helix domain XRE family transcriptional regulator phrog_8 transcriptional regulator transcription regulation -1 21085 21531
AUS03522.1 MG727698_p54 hypothetical protein phrog_7503 unknown function unknown function 1 29046 29360
AUS03502.1 MG727698_p30 hypothetical protein phrog_3374 unknown function unknown function -1 17990 18157
AUS03513.1 MG727698_p45 hypothetical protein phrog_9497 unknown function unknown function 1 23607 23879
AUS03497.1 MG727698_p23 hypothetical protein phrog_9393 unknown function unknown function 1 15279 15440
AUS03504.1 MG727698_p32 YoID-like protein phrog_8703 unknown function unknown function 1 18948 19202
AUS03485.1 MG727698_p11 major tail protein phrog_1407 major tail protein tail 1 6697 7134
AUS03486.1 MG727698_p12 hypothetical protein phrog_7902 unknown function unknown function 1 7131 7469
AUS03524.1 MG727698_p56 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 30170 31492
AUS03479.1 MG727698_p5 major capsid protein phrog_10 major head protein head and packaging 1 4022 5152
AUS03553.1 MG727698_p76 hypothetical protein singleton unknown function unknown function -1 39075 39212
AUS03544.1 MG727698_p77 hypothetical protein singleton unknown function unknown function 1 39570 39746
AUS03475.1 MG727698_p1 terminase small subunit phrog_361 terminase small subunit head and packaging 1 50 364
AUS03521.1 MG727698_p53 MBL fold metallo-hydrolase phrog_392 metal-dependent hydrolase other 1 28291 29049
AUS03496.1 MG727698_p22 holin phrog_1299 holin lysis 1 14896 15138
AUS03492.1 MG727698_p18 hypothetical protein phrog_6220 unknown function unknown function 1 13493 13840
AUS03527.1 MG727698_p59 hypothetical protein phrog_19477 unknown function unknown function 1 32014 32220
AUS03551.1 MG727698_p37 antirepressor phrog_33133 anti-repressor transcription regulation 1 20847 21182
AUS03547.1 MG727698_p24 hypothetical protein phrog_14009 unknown function unknown function -1 15849 15974
AUS03501.1 MG727698_p28 hypothetical protein phrog_24293 unknown function unknown function 1 17661 17813
AUS03519.1 MG727698_p51 hypothetical protein phrog_5189 unknown function unknown function 1 27176 27373