Genomic map of Paenibacillus phage Pagassa (MG727699)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG727699
Definition
Paenibacillus phage Pagassa, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Sitaravirus; unclassified Sitaravirus.
DB of origin
NUCCORE
Length
40035
Host Name
Paenibacillus larvae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
70
%GC
42
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUS03745.1 MG727699_p61 NTP pyrophosphohydrolase phrog_715 MazG-like pyrophosphatase other 1 35086 35391
AUS03757.1 MG727699_p30 pyridine nucleotide-disulfide oxidoreductase phrog_26658 unknown function unknown function -1 19151 19384
AUS03700.1 MG727699_p11 major tail protein phrog_1407 major tail protein tail 1 6679 7116
AUS03754.1 MG727699_p70 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 39643 39981
AUS03708.1 MG727699_p19 hypothetical protein phrog_134 unknown function unknown function 1 13819 13980
AUS03712.1 MG727699_p23 hypothetical protein phrog_9393 unknown function unknown function 1 15250 15411
AUS03721.1 MG727699_p36 helix-turn-helix domain DNA-binding protein, excisionase family phrog_66 excisionase and transcriptional regulator integration and excision 1 21881 22093
AUS03714.1 MG727699_p26 hypothetical protein phrog_3711 unknown function unknown function 1 18143 18364
AUS03713.1 MG727699_p25 toxin-like protein phrog_18811 toxin moron, auxiliary metabolic gene and host takeover 1 16100 18130
AUS03720.1 MG727699_p35 helix-turn-helix domain Cro/C1 family transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 21650 21880
AUS03734.1 MG727699_p49 hypothetical protein phrog_8406 unknown function unknown function 1 27321 27584
AUS03738.1 MG727699_p53 DNA recombination protein phrog_2780 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 29583 30503
AUS03744.1 MG727699_p59 DNA-cytosine methyltransferase phrog_363 DNA methyltransferase other 1 34019 35089
AUS03722.1 MG727699_p37 hypothetical protein phrog_13096 unknown function unknown function 1 22161 22304
AUS03753.1 MG727699_p69 transglycosylase phrog_1315 unknown function unknown function 1 39380 39646
AUS03728.2 MG727699_p43 hypothetical protein singleton unknown function unknown function 1 24916 25023
AUS03705.1 MG727699_p16 tail protein phrog_538 minor tail protein tail 1 11277 12395
AUS03706.1 MG727699_p17 tail protein phrog_5339 virion structural protein head and packaging 1 12392 13474
AUS03691.1 MG727699_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 345 2069
AUS03692.1 MG727699_p3 portal protein phrog_12 portal protein head and packaging 1 2066 3319
AUS03751.1 MG727699_p67 antitoxin phrog_497 toxin-antitoxin system HicB-like moron, auxiliary metabolic gene and host takeover -1 37891 38313
AUS03690.1 MG727699_p1 terminase small subunit phrog_361 terminase small subunit head and packaging 1 50 364
AUS03756.1 MG727699_p32 hypothetical protein phrog_21019 unknown function unknown function -1 19399 19602
AUS03735.1 MG727699_p50 hypothetical protein phrog_8288 unknown function unknown function 1 27589 27879
AUS03731.1 MG727699_p46 antirepressor phrog_373 anti-repressor transcription regulation 1 25801 26583
AUS03718.1 MG727699_p33 integrase phrog_1 integrase integration and excision -1 19629 20774
AUS03699.1 MG727699_p10 tail protein phrog_176 tail terminator connector 1 6282 6677
AUS03746.1 MG727699_p62 protein YopX phrog_98 unknown function unknown function 1 35429 35881
AUS03719.1 MG727699_p34 helix-turn-helix domain containing XRE family transcriptional regulator phrog_4 transcriptional repressor transcription regulation -1 20837 21508
AUS03759.1 MG727699_p60 DNA-cytosine methyltransferase phrog_1008 DNA methyltransferase other 1 34221 34925
AUS03724.1 MG727699_p39 hypothetical protein phrog_26848 unknown function unknown function 1 23178 23567
AUS03704.1 MG727699_p15 tail protein phrog_33 distal tail protein Dit tail 1 10423 11274
AUS03715.1 MG727699_p27 YolD-like protein phrog_8703 unknown function unknown function 1 18468 18722
AUS03750.1 MG727699_p66 transcriptional regulator phrog_248 transcriptional activator transcription regulation 1 37311 37751
AUS03709.1 MG727699_p20 holin phrog_2429 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 13961 14200
AUS03694.1 MG727699_p5 major capsid protein phrog_10 major head protein head and packaging 1 4022 5152
AUS03755.1 MG727699_p24 hypothetical protein phrog_14009 unknown function unknown function -1 15821 15946
AUS03739.1 MG727699_p54 MBL-fold metallo-hydrolase phrog_392 metal-dependent hydrolase other 1 30516 31274
AUS03698.1 MG727699_p9 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 5870 6298
AUS03733.1 MG727699_p48 hypothetical protein phrog_14421 unknown function unknown function 1 26795 27346
AUS03716.1 MG727699_p28 hypothetical protein phrog_6785 unknown function unknown function 1 18835 19032
AUS03707.1 MG727699_p18 hypothetical protein phrog_6220 unknown function unknown function 1 13475 13822
AUS03703.1 MG727699_p14 tail tape measure protein phrog_58 tail length tape measure protein tail 1 7790 10426
AUS03693.1 MG727699_p4 Clp protease phrog_94 head maturation protease head and packaging 1 3309 4025
AUS03743.1 MG727699_p58 hypothetical protein phrog_6868 unknown function unknown function 1 33715 34026
AUS03711.1 MG727699_p22 holin phrog_1299 holin lysis 1 14878 15120
AUS03725.1 MG727699_p40 antirepressor phrog_373 anti-repressor transcription regulation 1 23564 24304
AUS03740.1 MG727699_p55 hypothetical protein phrog_7503 unknown function unknown function 1 31271 31585
AUS03701.1 MG727699_p12 hypothetical protein phrog_7902 unknown function unknown function 1 7113 7451
AUS03723.1 MG727699_p38 antirepressor/restriction endonuclease phrog_63 anti-repressor Ant transcription regulation 1 22333 23157
AUS03710.1 MG727699_p21 N-acetylmuramoyl-L-alanine amidase phrog_3088 amidase lysis 1 14197 14868
AUS03749.1 MG727699_p65 hypothetical protein phrog_5494 unknown function unknown function 1 36802 37260
AUS03730.1 MG727699_p45 transcriptional regulator phrog_585 unknown function unknown function -1 25335 25715
AUS03697.1 MG727699_p8 head-tail connector complex protein phrog_25 head closure Hc1 connector 1 5547 5870
AUS03736.1 MG727699_p51 AAA domain ATPase phrog_1499 unknown function unknown function 1 27863 29392
AUS03727.1 MG727699_p42 hypothetical protein phrog_10535 unknown function unknown function 1 24699 24932
AUS03695.1 MG727699_p6 hypothetical protein phrog_6793 unknown function unknown function 1 5130 5294
AUS03726.1 MG727699_p41 hypothetical protein phrog_13601 unknown function unknown function 1 24334 24702
AUS03741.1 MG727699_p56 primosome component-like protein phrog_2514 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 31600 32430
AUS03742.1 MG727699_p57 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 32390 33718
AUS03729.1 MG727699_p44 hypothetical protein phrog_9497 unknown function unknown function 1 25104 25343
AUS03717.1 MG727699_p29 transcriptional regulator phrog_3502 unknown function unknown function 1 19022 19279
AUS03732.1 MG727699_p47 hypothetical protein phrog_21057 unknown function unknown function 1 26587 26808
AUS03747.1 MG727699_p63 hypothetical protein phrog_6998 unknown function unknown function 1 35874 36089
AUS03748.1 MG727699_p64 holliday junction resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 36086 36643
AUS03752.1 MG727699_p68 toxin phrog_353 toxin moron, auxiliary metabolic gene and host takeover -1 38375 38590
AUS03696.1 MG727699_p7 head-tail connector complex protein phrog_40 head-tail adaptor Ad1 connector 1 5287 5550
AUS03702.1 MG727699_p13 hypothetical protein phrog_7848 unknown function unknown function 1 7478 7732
AUS03737.1 MG727699_p52 hypothetical protein phrog_5189 unknown function unknown function 1 29389 29586
AUS03758.1 MG727699_p31 hypothetical protein phrog_23531 unknown function unknown function 1 19183 19329