| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG727701 |
Definition |
Paenibacillus phage Leyra, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Sitaravirus; unclassified Sitaravirus. |
DB of origin |
NUCCORE |
Length |
42276 |
Host Name |
Paenibacillus larvae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
75 |
%GC |
41.39 |
Number of singletons |
3 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUS03858.1 | MG727701_p41 | helix-turn-helix domain Cro/C1-type transcriptional regulator | phrog_18248 | transcriptional regulator | transcription regulation | -1 | 22755 | 23549 |
| AUS03874.1 | MG727701_p57 | hypothetical protein | phrog_7503 | unknown function | unknown function | 1 | 31724 | 32038 |
| AUS03894.1 | MG727701_p30 | hypothetical protein | phrog_29540 | unknown function | unknown function | -1 | 18155 | 18316 |
| AUS03869.1 | MG727701_p52 | hypothetical protein | phrog_8288 | unknown function | unknown function | 1 | 28042 | 28332 |
| AUS03889.1 | MG727701_p73 | hypothetical protein | phrog_24621 | unknown function | unknown function | 1 | 40819 | 40956 |
| AUS03882.1 | MG727701_p66 | hypothetical protein | phrog_5494 | unknown function | unknown function | 1 | 36763 | 37221 |
| AUS03828.1 | MG727701_p4 | Clp protease | phrog_94 | head maturation protease | head and packaging | 1 | 3309 | 4025 |
| AUS03862.1 | MG727701_p45 | antirepressor | phrog_373 | anti-repressor | transcription regulation | 1 | 25012 | 25752 |
| AUS03890.1 | MG727701_p74 | transglycosylase | phrog_1315 | unknown function | unknown function | 1 | 41621 | 41887 |
| AUS03881.1 | MG727701_p65 | holliday junction resolvase | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 36047 | 36604 |
| AUS03879.1 | MG727701_p63 | hypothetical protein | phrog_7018 | unknown function | unknown function | 1 | 35541 | 35723 |
| AUS03845.1 | MG727701_p21 | N-acetylmuramoyl-L-alanine amidase | phrog_3088 | amidase | lysis | 1 | 14202 | 14876 |
| AUS03850.1 | MG727701_p27 | hypothetical protein | phrog_15378 | unknown function | unknown function | 1 | 16585 | 17109 |
| AUS03861.1 | MG727701_p44 | helix-turn-helix domain DNA binding protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 24776 | 25015 |
| AUS03838.1 | MG727701_p14 | tail tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 7795 | 10431 |
| AUS03859.1 | MG727701_p42 | helix-turn-helix XRE family transcriptional regulator | phrog_1468 | transcriptional repressor | transcription regulation | 1 | 23759 | 24010 |
| AUS03865.1 | MG727701_p48 | hypothetical protein | phrog_9497 | unknown function | unknown function | 1 | 26266 | 26538 |
| AUS03827.1 | MG727701_p3 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2066 | 3319 |
| AUS03876.1 | MG727701_p59 | replicative DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 32849 | 34171 |
| AUS03873.1 | MG727701_p56 | MBL fold metallo-hydrolase | phrog_392 | metal-dependent hydrolase | other | 1 | 30969 | 31727 |
| AUS03840.1 | MG727701_p16 | tail protein | phrog_538 | minor tail protein | tail | 1 | 11282 | 12400 |
| AUS03860.1 | MG727701_p43 | KilAC domain antirepressor | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 24007 | 24747 |
| AUS03888.1 | MG727701_p72 | toxin | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | -1 | 40409 | 40612 |
| AUS03853.1 | MG727701_p31 | transposase | phrog_151 | transposase | integration and excision | -1 | 18329 | 19012 |
| AUS03896.1 | MG727701_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19114 | 19200 |
| AUS03856.1 | MG727701_p38 | antirepressor | phrog_17477 | anti-repressor | transcription regulation | 1 | 20730 | 21173 |
| AUS03878.1 | MG727701_p61 | DNA-cytosine methyltransferase | phrog_363 | DNA methyltransferase | other | 1 | 34490 | 35527 |
| AUS03863.1 | MG727701_p46 | hypothetical protein | phrog_12765 | unknown function | unknown function | 1 | 25779 | 25997 |
| AUS03887.1 | MG727701_p71 | antitoxin | phrog_497 | toxin-antitoxin system HicB-like | moron, auxiliary metabolic gene and host takeover | -1 | 39968 | 40378 |
| AUS03891.1 | MG727701_p75 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41884 | 42222 |
| AUS03857.1 | MG727701_p40 | integrase | phrog_1 | integrase | integration and excision | -1 | 21485 | 22708 |
| AUS03868.1 | MG727701_p51 | hypothetical protein | phrog_8406 | unknown function | unknown function | 1 | 27774 | 28037 |
| AUS03875.1 | MG727701_p58 | primosome component-like protein | phrog_2514 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 32053 | 32883 |
| AUS03835.1 | MG727701_p11 | major tail protein | phrog_1407 | major tail protein | tail | 1 | 6682 | 7119 |
| AUS03885.1 | MG727701_p69 | serine recombinase | phrog_95 | integrase | integration and excision | 1 | 37962 | 39524 |
| AUS03880.1 | MG727701_p64 | hypothetical protein | phrog_6998 | unknown function | unknown function | 1 | 35835 | 36050 |
| AUS03872.1 | MG727701_p55 | DNA recombination protein | phrog_2780 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 30036 | 30956 |
| AUS03886.1 | MG727701_p70 | hypothetical protein | phrog_1454 | unknown function | unknown function | 1 | 39736 | 39939 |
| AUS03867.1 | MG727701_p50 | hypothetical protein | phrog_12825 | unknown function | unknown function | 1 | 27320 | 27799 |
| AUS03844.1 | MG727701_p20 | holin | phrog_2429 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 13966 | 14205 |
| AUS03854.1 | MG727701_p35 | hypothetical protein | phrog_3374 | unknown function | unknown function | -1 | 19498 | 19701 |
| AUS03849.1 | MG727701_p26 | amidase domain protein | phrog_15561 | peptidase | other | 1 | 15842 | 16549 |
| AUS03884.1 | MG727701_p68 | hypothetical protein | phrog_15506 | unknown function | unknown function | 1 | 37742 | 38023 |
| AUS03870.1 | MG727701_p53 | DNA repair protein | phrog_1499 | unknown function | unknown function | 1 | 28316 | 29845 |
| AUS03833.1 | MG727701_p9 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 5873 | 6301 |
| AUS03877.1 | MG727701_p60 | hypothetical protein | phrog_6868 | unknown function | unknown function | 1 | 34168 | 34479 |
| AUS03892.1 | MG727701_p37 | hypothetical protein | phrog_19875 | unknown function | unknown function | -1 | 20348 | 20626 |
| AUS03834.1 | MG727701_p10 | tail protein | phrog_176 | tail terminator | connector | 1 | 6285 | 6680 |
| AUS03864.1 | MG727701_p47 | hypothetical protein | phrog_12380 | unknown function | unknown function | 1 | 26042 | 26269 |
| AUS03843.1 | MG727701_p19 | hypothetical protein | phrog_134 | unknown function | unknown function | 1 | 13824 | 13985 |
| AUS03825.1 | MG727701_p1 | terminase small subunit | phrog_361 | terminase small subunit | head and packaging | 1 | 50 | 364 |
| AUS03851.1 | MG727701_p28 | hypothetical protein | phrog_17971 | unknown function | unknown function | 1 | 17240 | 17380 |
| AUS03898.1 | MG727701_p62 | DNA-cytosine methyltransferase | phrog_1008 | DNA methyltransferase | other | 1 | 34674 | 35378 |
| AUS03893.1 | MG727701_p39 | pyridine nucleotide-disulfide oxidoreductase | singleton | unknown function | unknown function | -1 | 21274 | 21447 |
| AUS03866.1 | MG727701_p49 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 26565 | 27323 |
| AUS03829.1 | MG727701_p5 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4022 | 5152 |
| AUS03895.1 | MG727701_p24 | hypothetical protein | phrog_14009 | unknown function | unknown function | -1 | 15468 | 15587 |
| AUS03842.1 | MG727701_p18 | hypothetical protein | phrog_6220 | unknown function | unknown function | 1 | 13480 | 13827 |
| AUS03871.1 | MG727701_p54 | hypothetical protein | phrog_5189 | unknown function | unknown function | 1 | 29842 | 30039 |
| AUS03832.1 | MG727701_p8 | head-tail connector complex protein | phrog_25 | head closure Hc1 | connector | 1 | 5556 | 5873 |
| AUS03836.1 | MG727701_p12 | hypothetical protein | phrog_7902 | unknown function | unknown function | 1 | 7116 | 7454 |
| AUS03847.1 | MG727701_p23 | hypothetical protein | phrog_9393 | unknown function | unknown function | 1 | 15262 | 15453 |
| AUS03846.1 | MG727701_p22 | holin | phrog_1299 | holin | lysis | 1 | 14886 | 15128 |
| AUS03830.1 | MG727701_p6 | hypothetical protein | phrog_6793 | unknown function | unknown function | 1 | 5130 | 5303 |
| AUS03831.1 | MG727701_p7 | head-tail connector complex protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 5296 | 5559 |
| AUS03839.1 | MG727701_p15 | tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 10428 | 11279 |
| AUS03841.1 | MG727701_p17 | tail protein | phrog_5339 | virion structural protein | head and packaging | 1 | 12397 | 13479 |
| AUS03826.1 | MG727701_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 345 | 2069 |
| AUS03848.1 | MG727701_p25 | hypothetical protein | phrog_14782 | unknown function | unknown function | 1 | 15735 | 15845 |
| AUS03883.1 | MG727701_p67 | transcriptional regulator | phrog_248 | transcriptional activator | transcription regulation | 1 | 37272 | 37730 |
| AUS03837.1 | MG727701_p13 | hypothetical protein | phrog_7848 | unknown function | unknown function | 1 | 7481 | 7735 |
| AUS03899.1 | MG727701_p33 | hypothetical protein | phrog_36097 | unknown function | unknown function | -1 | 19319 | 19477 |
| AUS03897.1 | MG727701_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19323 | 19505 |
| AUS03852.1 | MG727701_p29 | transposase/integrase | phrog_157 | transposase | integration and excision | -1 | 17439 | 18158 |
| AUS03855.1 | MG727701_p36 | hypothetical protein | phrog_8263 | unknown function | unknown function | -1 | 19703 | 20251 |