| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG727702 |
Definition |
Paenibacillus phage Likha, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Sitaravirus; unclassified Sitaravirus. |
DB of origin |
NUCCORE |
Length |
39778 |
Host Name |
Paenibacillus larvae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
65 |
%GC |
41.3 |
Number of singletons |
6 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUS03917.1 | MG727702_p18 | hypothetical protein | phrog_6220 | unknown function | unknown function | 1 | 13502 | 13849 |
| AUS03959.1 | MG727702_p62 | toxin | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | -1 | 37911 | 38114 |
| AUS03902.1 | MG727702_p3 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2067 | 3320 |
| AUS03906.1 | MG727702_p7 | head-tail connector complex protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 5315 | 5578 |
| AUS03914.1 | MG727702_p15 | tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 10450 | 11301 |
| AUS03939.1 | MG727702_p41 | hypothetical protein | phrog_8406 | unknown function | unknown function | 1 | 25268 | 25531 |
| AUS03933.1 | MG727702_p35 | antirepressor | phrog_373 | anti-repressor | transcription regulation | 1 | 22448 | 23188 |
| AUS03911.1 | MG727702_p12 | hypothetical protein | phrog_7902 | unknown function | unknown function | 1 | 7141 | 7479 |
| AUS03952.1 | MG727702_p55 | holliday junction resolvase | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 33547 | 34104 |
| AUS03909.1 | MG727702_p10 | tail protein | phrog_176 | tail terminator | connector | 1 | 6310 | 6705 |
| AUS03942.1 | MG727702_p44 | hypothetical protein | phrog_5189 | unknown function | unknown function | 1 | 27336 | 27533 |
| AUS03962.1 | MG727702_p65 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 39386 | 39724 |
| AUS03944.1 | MG727702_p46 | MBL fold metallo-hydrolase | phrog_392 | metal-dependent hydrolase | other | 1 | 28463 | 29221 |
| AUS03963.1 | MG727702_p29 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19525 | 19659 |
| AUS03904.1 | MG727702_p5 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4023 | 5153 |
| AUS03927.1 | MG727702_p28 | glycophosphodiester phosphodiesterase | phrog_806 | unknown function | unknown function | -1 | 18508 | 19059 |
| AUS03929.1 | MG727702_p31 | integrase | phrog_95 | integrase | integration and excision | -1 | 19865 | 21301 |
| AUS03918.1 | MG727702_p19 | hypothetical protein | phrog_134 | unknown function | unknown function | 1 | 13846 | 14007 |
| AUS03919.1 | MG727702_p20 | holin | phrog_2429 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 13988 | 14227 |
| AUS03931.1 | MG727702_p33 | helix-turn-helix domain XRE family transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | 1 | 21786 | 22052 |
| AUS03905.1 | MG727702_p6 | hypothetical protein | phrog_6793 | unknown function | unknown function | 1 | 5131 | 5322 |
| AUS03943.1 | MG727702_p45 | DNA recombination protein | phrog_2780 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 27530 | 28450 |
| AUS03935.1 | MG727702_p37 | hypothetical protein | phrog_10535 | unknown function | unknown function | 1 | 23598 | 23828 |
| AUS03964.1 | MG727702_p52 | DNA cytosine methyltransferase | phrog_1008 | DNA methyltransferase | other | 1 | 32174 | 32878 |
| AUS03945.1 | MG727702_p47 | hypothetical protein | phrog_7503 | unknown function | unknown function | 1 | 29218 | 29532 |
| AUS03960.1 | MG727702_p63 | hypothetical protein | phrog_24621 | unknown function | unknown function | 1 | 38321 | 38458 |
| AUS03921.1 | MG727702_p22 | holin | phrog_1299 | holin | lysis | 1 | 14908 | 15147 |
| AUS03941.1 | MG727702_p43 | DNA repair protein | phrog_1499 | unknown function | unknown function | 1 | 25810 | 27339 |
| AUS03937.1 | MG727702_p39 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 23990 | 24742 |
| AUS03924.1 | MG727702_p25 | toxin-like protein | phrog_18811 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 15787 | 17796 |
| AUS03915.1 | MG727702_p16 | tail protein | phrog_538 | minor tail protein | tail | 1 | 11304 | 12422 |
| AUS03900.1 | MG727702_p1 | terminase small subunit | phrog_361 | terminase small subunit | head and packaging | 1 | 51 | 365 |
| AUS03956.1 | MG727702_p59 | serine recombinase | phrog_95 | integrase | integration and excision | 1 | 35464 | 37026 |
| AUS03949.2 | MG727702_p51 | DNA cytosine methyltransferase | phrog_363 | DNA methyltransferase | other | 1 | 31990 | 33027 |
| AUS03910.1 | MG727702_p11 | major tail protein | phrog_1407 | major tail protein | tail | 1 | 6707 | 7144 |
| AUS03957.1 | MG727702_p60 | phosphomannomutase | phrog_1454 | unknown function | unknown function | 1 | 37238 | 37441 |
| AUS03961.1 | MG727702_p64 | transglycosylase | phrog_1315 | unknown function | unknown function | 1 | 39123 | 39389 |
| AUS03936.1 | MG727702_p38 | hypothetical protein | phrog_13275 | unknown function | unknown function | 1 | 23812 | 23985 |
| AUS03953.1 | MG727702_p56 | hypothetical protein | phrog_5494 | unknown function | unknown function | 1 | 34263 | 34721 |
| AUS03912.1 | MG727702_p13 | hypothetical protein | phrog_7848 | unknown function | unknown function | 1 | 7506 | 7760 |
| AUS03913.1 | MG727702_p14 | tail tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 7817 | 10453 |
| AUS03928.1 | MG727702_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19656 | 19802 |
| AUS03951.1 | MG727702_p54 | hypothetical protein | phrog_6998 | unknown function | unknown function | 1 | 33335 | 33550 |
| AUS03932.1 | MG727702_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22263 | 22403 |
| AUS03950.1 | MG727702_p53 | hypothetical protein | phrog_7018 | unknown function | unknown function | 1 | 33041 | 33223 |
| AUS03923.1 | MG727702_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15560 | 15790 |
| AUS03916.1 | MG727702_p17 | tail protein | phrog_5339 | virion structural protein | head and packaging | 1 | 12419 | 13501 |
| AUS03954.1 | MG727702_p57 | transcriptional regulator | phrog_248 | transcriptional activator | transcription regulation | 1 | 34774 | 35232 |
| AUS03920.1 | MG727702_p21 | N-acetylmuramoyl-L-alanine amidase | phrog_3088 | amidase | lysis | 1 | 14224 | 14898 |
| AUS03907.1 | MG727702_p8 | head-tail connector complex protein | phrog_25 | head closure Hc1 | connector | 1 | 5575 | 5898 |
| AUS03948.1 | MG727702_p50 | hypothetical protein | phrog_6868 | unknown function | unknown function | 1 | 31668 | 31979 |
| AUS03955.1 | MG727702_p58 | hypothetical protein | phrog_15506 | unknown function | unknown function | 1 | 35244 | 35525 |
| AUS03947.1 | MG727702_p49 | replicative DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 30343 | 31671 |
| AUS03946.1 | MG727702_p48 | primosome component-like protein | phrog_2514 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 29547 | 30383 |
| AUS03938.1 | MG727702_p40 | hypothetical protein | phrog_14421 | unknown function | unknown function | 1 | 24739 | 25293 |
| AUS03934.1 | MG727702_p36 | hypothetical protein | phrog_13601 | unknown function | unknown function | 1 | 23218 | 23601 |
| AUS03925.1 | MG727702_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17811 | 18215 |
| AUS03940.1 | MG727702_p42 | hypothetical protein | phrog_8288 | unknown function | unknown function | 1 | 25536 | 25826 |
| AUS03903.1 | MG727702_p4 | Clp protease | phrog_94 | head maturation protease | head and packaging | 1 | 3310 | 4026 |
| AUS03930.1 | MG727702_p32 | helix-turn-helix domain XRE family transcriptional regulator | phrog_8 | transcriptional regulator | transcription regulation | -1 | 21352 | 21723 |
| AUS03901.1 | MG727702_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 346 | 2070 |
| AUS03908.1 | MG727702_p9 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 5898 | 6326 |
| AUS03926.1 | MG727702_p27 | hypothetical protein | singleton | unknown function | unknown function | -1 | 18278 | 18505 |
| AUS03958.1 | MG727702_p61 | antitoxin | phrog_497 | toxin-antitoxin system HicB-like | moron, auxiliary metabolic gene and host takeover | -1 | 37470 | 37880 |
| AUS03922.1 | MG727702_p23 | hypothetical protein | phrog_9393 | unknown function | unknown function | 1 | 15271 | 15456 |