| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG757160 |
Definition |
Mycobacterium phage Kimchi, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus. |
DB of origin |
NUCCORE |
Length |
75829 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
149 |
%GC |
62.87 |
Number of singletons |
0 |
Number of paralogs |
4 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVE00184.1 | MG757160_p132 | hypothetical protein | phrog_2942 | unknown function | unknown function | -1 | 70051 | 70305 |
| AVE00175.1 | MG757160_p146 | hypothetical protein | phrog_8479 | unknown function | unknown function | -1 | 74371 | 74535 |
| AVE00145.1 | MG757160_p109 | hypothetical protein | phrog_1969 | unknown function | unknown function | 1 | 61782 | 62093 |
| AVE00058.1 | MG757160_p14 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7338 | 8831 |
| AVE00048.1 | MG757160_p3 | hypothetical protein | phrog_2829 | unknown function | unknown function | 1 | 446 | 604 |
| AVE00134.1 | MG757160_p95 | RNA ligase | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 54621 | 55946 |
| AVE00106.1 | MG757160_p66 | hypothetical protein | phrog_3463 | unknown function | unknown function | 1 | 42993 | 43100 |
| AVE00171.1 | MG757160_p142 | hypothetical protein | phrog_1438 | unknown function | unknown function | -1 | 73549 | 73722 |
| AVE00078.1 | MG757160_p35 | holin | phrog_526 | holin | lysis | 1 | 31140 | 31523 |
| AVE00136.1 | MG757160_p98 | hypothetical protein | phrog_2853 | unknown function | unknown function | 1 | 57078 | 57236 |
| AVE00144.1 | MG757160_p108 | hypothetical protein | phrog_2757 | unknown function | unknown function | 1 | 61487 | 61777 |
| AVE00135.1 | MG757160_p97 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 56801 | 57061 |
| AVE00190.1 | MG757160_p113 | HNH endonuclease | phrog_1492 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 63385 | 63885 |
| AVE00179.1 | MG757160_p39 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 33128 | 33373 |
| AVE00093.1 | MG757160_p51 | hypothetical protein | phrog_2702 | unknown function | unknown function | -1 | 36251 | 36466 |
| AVE00060.1 | MG757160_p16 | head-to-tail connector protein | phrog_442 | head-tail adaptor | connector | 1 | 9133 | 9699 |
| AVE00164.1 | MG757160_p133 | hypothetical protein | phrog_9808 | unknown function | unknown function | -1 | 70302 | 70520 |
| AVE00082.1 | MG757160_p40 | DNA bridging protein | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 33570 | 33956 |
| AVE00072.1 | MG757160_p29 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 24670 | 27510 |
| AVE00166.1 | MG757160_p137 | hypothetical protein | phrog_1587 | unknown function | unknown function | -1 | 71897 | 72244 |
| AVE00187.1 | MG757160_p121 | hypothetical protein | phrog_2279 | unknown function | unknown function | 1 | 67113 | 67325 |
| AVE00132.1 | MG757160_p92 | polynucleotide kinase | phrog_505 | polynucleotide kinase | other | 1 | 53113 | 54054 |
| AVE00182.1 | MG757160_p105 | protease | phrog_94 | head maturation protease | head and packaging | 1 | 60155 | 60934 |
| AVE00133.1 | MG757160_p93 | hypothetical protein | phrog_2495 | unknown function | unknown function | 1 | 54161 | 54529 |
| AVE00091.1 | MG757160_p49 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 35858 | 36025 |
| AVE00151.1 | MG757160_p117 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 65614 | 65856 |
| AVE00068.1 | MG757160_p25 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18090 | 19751 |
| AVE00067.1 | MG757160_p24 | tape measure protein | phrog_2723 | tail length tape measure protein | tail | 1 | 13327 | 18060 |
| AVE00080.1 | MG757160_p37 | lysin B | phrog_102 | endolysin | lysis | 1 | 31851 | 32708 |
| AVE00073.1 | MG757160_p30 | minor tail protein | phrog_553 | minor tail protein | tail | 1 | 27511 | 28473 |
| AVE00147.1 | MG757160_p112 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 63111 | 63374 |
| AVE00130.1 | MG757160_p90 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 52405 | 52767 |
| AVE00126.1 | MG757160_p86 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 51546 | 51734 |
| AVE00057.1 | MG757160_p13 | capsid maturation protease | phrog_2753 | head maturation protease | head and packaging | 1 | 5958 | 7250 |
| AVE00081.1 | MG757160_p38 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 32705 | 33121 |
| AVE00139.1 | MG757160_p101 | hypothetical protein | phrog_2788 | unknown function | unknown function | 1 | 58134 | 58469 |
| AVE00049.1 | MG757160_p4 | hypothetical protein | phrog_2775 | unknown function | unknown function | 1 | 601 | 786 |
| AVE00056.1 | MG757160_p11 | hypothetical protein | phrog_2845 | unknown function | unknown function | 1 | 4191 | 4412 |
| AVE00154.1 | MG757160_p120 | hypothetical protein | phrog_2755 | unknown function | unknown function | 1 | 66947 | 67120 |
| AVE00116.1 | MG757160_p76 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 47214 | 47582 |
| AVE00146.1 | MG757160_p111 | hypothetical protein | phrog_2846 | unknown function | unknown function | 1 | 62890 | 63114 |
| AVE00079.1 | MG757160_p36 | hypothetical protein | phrog_2424 | unknown function | unknown function | 1 | 31516 | 31854 |
| AVE00141.1 | MG757160_p104 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 59599 | 60039 |
| AVE00077.1 | MG757160_p34 | lysin A | phrog_317 | endolysin | lysis | 1 | 29634 | 31136 |
| AVE00070.1 | MG757160_p27 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 21427 | 22260 |
| AVE00105.1 | MG757160_p65 | hypothetical protein | phrog_2744 | unknown function | unknown function | 1 | 42669 | 42974 |
| AVE00118.1 | MG757160_p78 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 47956 | 48129 |
| AVE00168.1 | MG757160_p139 | hypothetical protein | phrog_3730 | unknown function | unknown function | -1 | 72551 | 72676 |
| AVE00177.1 | MG757160_p12 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 4399 | 5955 |
| AVE00094.1 | MG757160_p52 | hypothetical protein | phrog_2815 | unknown function | unknown function | -1 | 36485 | 36631 |
| AVE00108.1 | MG757160_p68 | hypothetical protein | phrog_2221 | unknown function | unknown function | 1 | 43341 | 43502 |
| AVE00087.1 | MG757160_p45 | hypothetical protein | phrog_3447 | unknown function | unknown function | -1 | 35089 | 35301 |
| AVE00069.1 | MG757160_p26 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 19739 | 21418 |
| AVE00114.1 | MG757160_p74 | hypothetical protein | phrog_2750 | unknown function | unknown function | 1 | 46430 | 46741 |
| AVE00137.1 | MG757160_p99 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 57233 | 57685 |
| AVE00063.1 | MG757160_p20 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 10835 | 11809 |
| AVE00162.1 | MG757160_p130 | helix turn helix DNA-binding protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 69283 | 69546 |
| AVE00138.1 | MG757160_p100 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 57689 | 58132 |
| AVE00100.1 | MG757160_p59 | hypothetical protein | phrog_3071 | unknown function | unknown function | 1 | 40628 | 40726 |
| AVE00075.1 | MG757160_p32 | helix turn helix DNA-binding protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 28958 | 29143 |
| AVE00194.1 | MG757160_p149 | HNH endonuclease | phrog_589 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 75248 | 75595 |
| AVE00086.1 | MG757160_p44 | hypothetical protein | phrog_5831 | unknown function | unknown function | -1 | 34910 | 35092 |
| AVE00193.1 | MG757160_p94 | membrane protein | phrog_2844 | unknown function | unknown function | 1 | 54526 | 54624 |
| AVE00185.1 | MG757160_p135 | hypothetical protein | phrog_1915 | unknown function | unknown function | -1 | 70966 | 71514 |
| AVE00163.1 | MG757160_p131 | hypothetical protein | phrog_2579 | ParB C-terminal domain | DNA, RNA and nucleotide metabolism | -1 | 69543 | 69932 |
| AVE00121.1 | MG757160_p81 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48772 | 49089 |
| AVE00192.1 | MG757160_p1 | hypothetical protein | phrog_3456 | unknown function | unknown function | 1 | 10 | 270 |
| AVE00088.1 | MG757160_p46 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 35298 | 35627 |
| AVE00174.1 | MG757160_p145 | hypothetical protein | phrog_2795 | unknown function | unknown function | -1 | 74167 | 74367 |
| AVE00055.1 | MG757160_p10 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 2509 | 4179 |
| AVE00140.1 | MG757160_p102 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 58466 | 59002 |
| AVE00122.1 | MG757160_p82 | hypothetical protein | phrog_1673 | unknown function | unknown function | 1 | 49079 | 49315 |
| AVE00051.1 | MG757160_p6 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 1057 | 1518 |
| AVE00054.1 | MG757160_p9 | hypothetical protein | phrog_18713 | unknown function | unknown function | -1 | 2156 | 2326 |
| AVE00161.1 | MG757160_p129 | hypothetical protein | phrog_3016 | unknown function | unknown function | 1 | 68770 | 68904 |
| AVE00062.1 | MG757160_p19 | head-to-tail connector protein | phrog_813 | head-tail adaptor | connector | 1 | 10404 | 10808 |
| AVE00059.1 | MG757160_p15 | head-to-tail connector protein | phrog_2796 | head-tail connector protein | connector | 1 | 8954 | 9133 |
| AVE00155.1 | MG757160_p123 | hypothetical protein | phrog_2174 | unknown function | unknown function | 1 | 67509 | 67970 |
| AVE00191.1 | MG757160_p136 | hypothetical protein | phrog_9837 | unknown function | unknown function | -1 | 71519 | 71881 |
| AVE00095.1 | MG757160_p53 | hypothetical protein | phrog_2759 | unknown function | unknown function | -1 | 36631 | 37026 |
| AVE00167.1 | MG757160_p138 | hypothetical protein | phrog_4547 | unknown function | unknown function | -1 | 72228 | 72545 |
| AVE00084.1 | MG757160_p42 | hypothetical protein | phrog_647 | unknown function | unknown function | -1 | 34198 | 34662 |
| AVE00047.1 | MG757160_p2 | hypothetical protein | phrog_4110 | unknown function | unknown function | 1 | 267 | 449 |
| AVE00103.1 | MG757160_p62 | hypothetical protein | phrog_2463 | unknown function | unknown function | 1 | 41704 | 41850 |
| AVE00101.1 | MG757160_p60 | membrane protein | phrog_2852 | unknown function | unknown function | 1 | 40723 | 40860 |
| AVE00098.1 | MG757160_p56 | hypothetical protein | phrog_2842 | unknown function | unknown function | 1 | 38886 | 39125 |
| AVE00157.1 | MG757160_p125 | hypothetical protein | phrog_2823 | unknown function | unknown function | 1 | 68118 | 68318 |
| AVE00169.1 | MG757160_p140 | hypothetical protein | phrog_2287 | unknown function | unknown function | -1 | 72666 | 72872 |
| AVE00188.1 | MG757160_p122 | hypothetical protein | phrog_3062 | unknown function | unknown function | 1 | 67306 | 67560 |
| AVE00131.1 | MG757160_p91 | resolvase | phrog_2894 | unknown function | unknown function | 1 | 52764 | 52958 |
| AVE00160.1 | MG757160_p128 | hypothetical protein | phrog_2897 | unknown function | unknown function | 1 | 68628 | 68759 |
| AVE00159.1 | MG757160_p127 | hypothetical protein | phrog_2925 | unknown function | unknown function | 1 | 68449 | 68628 |
| AVE00156.1 | MG757160_p124 | hypothetical protein | phrog_2764 | unknown function | unknown function | 1 | 67967 | 68134 |
| AVE00065.1 | MG757160_p23 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 12463 | 12924 |
| AVE00128.1 | MG757160_p88 | hypothetical protein | phrog_2747 | unknown function | unknown function | 1 | 51966 | 52184 |
| AVE00150.1 | MG757160_p116 | DNA polymerase III subunit | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 64832 | 65617 |
| AVE00172.1 | MG757160_p143 | hypothetical protein | phrog_2772 | unknown function | unknown function | -1 | 73719 | 73955 |
| AVE00115.1 | MG757160_p75 | hypothetical protein | phrog_2771 | unknown function | unknown function | 1 | 46741 | 47214 |
| AVE00180.1 | MG757160_p57 | membrane protein | phrog_950 | unknown function | unknown function | -1 | 39103 | 39876 |
| AVE00125.1 | MG757160_p85 | dsDNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 50287 | 51549 |
| AVE00050.1 | MG757160_p5 | hypothetical protein | phrog_3858 | unknown function | unknown function | 1 | 783 | 1064 |
| AVE00173.1 | MG757160_p144 | hypothetical protein | phrog_7581 | unknown function | unknown function | -1 | 73958 | 74170 |
| AVE00071.1 | MG757160_p28 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 22277 | 24673 |
| AVE00142.1 | MG757160_p106 | hypothetical protein | phrog_1454 | unknown function | unknown function | 1 | 60936 | 61133 |
| AVE00089.1 | MG757160_p47 | hypothetical protein | phrog_6127 | unknown function | unknown function | -1 | 35620 | 35733 |
| AVE00178.1 | MG757160_p18 | head-to-tail connector protein | phrog_2805 | minor tail protein | tail | 1 | 10046 | 10426 |
| AVE00110.1 | MG757160_p70 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 44021 | 44350 |
| AVE00066.1 | MG757160_p22 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 12463 | 13334 |
| AVE00176.1 | MG757160_p147 | hypothetical protein | phrog_2904 | unknown function | unknown function | 1 | 74600 | 74959 |
| AVE00083.1 | MG757160_p41 | hypothetical protein | phrog_3481 | unknown function | unknown function | -1 | 34004 | 34195 |
| AVE00102.1 | MG757160_p61 | pentapeptide repeat protein | phrog_923 | unknown function | unknown function | 1 | 40857 | 41702 |
| AVE00158.1 | MG757160_p126 | hypothetical protein | phrog_2296 | unknown function | unknown function | 1 | 68315 | 68452 |
| AVE00129.1 | MG757160_p89 | hypothetical protein | phrog_1503 | unknown function | unknown function | 1 | 52181 | 52408 |
| AVE00195.1 | MG757160_p64 | hypothetical protein | phrog_4633 | unknown function | unknown function | 1 | 42434 | 42622 |
| AVE00186.1 | MG757160_p148 | hypothetical protein | phrog_2762 | unknown function | unknown function | 1 | 75037 | 75258 |
| AVE00183.1 | MG757160_p110 | HNH endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 62146 | 62436 |
| AVE00149.1 | MG757160_p115 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 64228 | 64821 |
| AVE00189.1 | MG757160_p103 | endonuclease VII | phrog_1035 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 59043 | 59606 |
| AVE00127.1 | MG757160_p87 | WhiB family transcription factor | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 51731 | 51991 |
| AVE00090.1 | MG757160_p48 | hypothetical protein | phrog_4396 | unknown function | unknown function | -1 | 35730 | 35858 |
| AVE00143.1 | MG757160_p107 | hypothetical protein | phrog_2785 | unknown function | unknown function | 1 | 61130 | 61486 |
| AVE00092.1 | MG757160_p50 | hypothetical protein | phrog_2893 | unknown function | unknown function | -1 | 36022 | 36192 |
| AVE00117.1 | MG757160_p77 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 47579 | 47956 |
| AVE00052.1 | MG757160_p7 | hypothetical protein | phrog_2142 | unknown function | unknown function | 1 | 1511 | 1855 |
| AVE00153.1 | MG757160_p119 | hypothetical protein | phrog_2965 | unknown function | unknown function | 1 | 66823 | 66960 |
| AVE00120.1 | MG757160_p80 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 48362 | 48775 |
| AVE00148.1 | MG757160_p114 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 63899 | 64231 |
| AVE00170.1 | MG757160_p141 | hypothetical protein | phrog_2883 | unknown function | unknown function | -1 | 72918 | 73406 |
| AVE00061.1 | MG757160_p17 | head-to-tail connector protein | phrog_1531 | head closure | connector | 1 | 9714 | 10049 |
| AVE00111.1 | MG757160_p71 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 44347 | 45315 |
| AVE00181.1 | MG757160_p96 | helix turn helix DNA-binding protein | phrog_1590 | unknown function | unknown function | 1 | 55983 | 56804 |
| AVE00074.1 | MG757160_p31 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 28543 | 28971 |
| AVE00152.1 | MG757160_p118 | DNA recombinase | phrog_97 | UvsX-like recombinase | other | 1 | 65864 | 66826 |
| AVE00053.1 | MG757160_p8 | hypothetical protein | phrog_4101 | unknown function | unknown function | -1 | 1917 | 2156 |
| AVE00104.1 | MG757160_p63 | hypothetical protein | phrog_2800 | unknown function | unknown function | 1 | 41847 | 42125 |
| AVE00096.1 | MG757160_p54 | membrane protein | phrog_2847 | unknown function | unknown function | -1 | 37313 | 37615 |
| AVE00064.1 | MG757160_p21 | hypothetical protein | phrog_5711 | head fiber protein | head and packaging | 1 | 11869 | 12342 |
| AVE00085.1 | MG757160_p43 | hypothetical protein | phrog_3472 | unknown function | unknown function | -1 | 34659 | 34913 |
| AVE00076.1 | MG757160_p33 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 29276 | 29560 |
| AVE00112.1 | MG757160_p72 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 45312 | 45722 |
| AVE00109.1 | MG757160_p69 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 43692 | 44024 |
| AVE00107.1 | MG757160_p67 | hypothetical protein | phrog_2147 | unknown function | unknown function | 1 | 43108 | 43341 |
| AVE00097.1 | MG757160_p55 | integrase | phrog_1 | integrase | integration and excision | 1 | 37866 | 38747 |
| AVE00113.1 | MG757160_p73 | ERF family ssDNA binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 45715 | 46437 |
| AVE00123.1 | MG757160_p83 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 49312 | 49962 |
| AVE00124.1 | MG757160_p84 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 49959 | 50294 |
| AVE00119.1 | MG757160_p79 | hypothetical protein | phrog_2793 | unknown function | unknown function | 1 | 48132 | 48365 |
| AVE00099.1 | MG757160_p58 | immunity repressor | phrog_2745 | transcriptional repressor | transcription regulation | -1 | 39971 | 40318 |
| AVE00165.1 | MG757160_p134 | hypothetical protein | phrog_13319 | unknown function | unknown function | -1 | 70517 | 70969 |