| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG757162 |
Definition |
Mycobacterium phage Opia, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Rosebushvirus; unclassified Rosebushvirus. |
DB of origin |
NUCCORE |
Length |
67401 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
93 |
%GC |
68.92 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AVE00289.1 | MG757162_p1 | HTH DNA binding domain protein | phrog_723 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 1 | 792 |
| AVE00330.1 | MG757162_p42 | hypothetical protein | phrog_892 | tail fiber protein | tail | 1 | 38114 | 38530 |
| AVE00356.1 | MG757162_p69 | hypothetical protein | phrog_7186 | unknown function | unknown function | 1 | 57342 | 57725 |
| AVE00294.1 | MG757162_p6 | GTP cyclohydrolase I | phrog_2197 | GTP cyclohydrolase | other | 1 | 3671 | 4246 |
| AVE00291.1 | MG757162_p3 | QueC-like queosine biosynthesis protein | phrog_1550 | QueC-like queuosine biosynthesis | moron, auxiliary metabolic gene and host takeover | 1 | 1826 | 2533 |
| AVE00310.1 | MG757162_p22 | hypothetical protein | phrog_7051 | unknown function | unknown function | -1 | 18715 | 18828 |
| AVE00290.1 | MG757162_p2 | queunine tRNA-ribosyltransferase | phrog_7068 | queuine tRNA-ribosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 789 | 1829 |
| AVE00303.1 | MG757162_p15 | major capsid protein | phrog_777 | major head protein | head and packaging | 1 | 12411 | 14438 |
| AVE00334.1 | MG757162_p46 | hypothetical protein | phrog_636 | unknown function | unknown function | -1 | 39924 | 40688 |
| AVE00292.1 | MG757162_p4 | QueD-like queosine biosynthesis protein | phrog_2389 | QueD-like 6-pyruvoyl-tetrahydropterin synthase | moron, auxiliary metabolic gene and host takeover | 1 | 2530 | 2961 |
| AVE00345.1 | MG757162_p57 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 50671 | 52500 |
| AVE00360.1 | MG757162_p73 | HicA-like toxin | phrog_2089 | unknown function | unknown function | -1 | 59056 | 59301 |
| AVE00318.1 | MG757162_p30 | minor tail protein | phrog_838 | unknown function | unknown function | 1 | 27476 | 28912 |
| AVE00378.1 | MG757162_p92 | hypothetical protein | phrog_6718 | unknown function | unknown function | -1 | 66195 | 66386 |
| AVE00293.1 | MG757162_p5 | QueE-like queosine biosynthesis protein | phrog_2076 | QueE-like radical SAM domain | moron, auxiliary metabolic gene and host takeover | 1 | 2958 | 3671 |
| AVE00346.1 | MG757162_p58 | hypothetical protein | phrog_3025 | unknown function | unknown function | -1 | 52497 | 52877 |
| AVE00298.1 | MG757162_p10 | hypothetical protein | phrog_7710 | unknown function | unknown function | 1 | 7046 | 7366 |
| AVE00361.1 | MG757162_p74 | hypothetical protein | phrog_7876 | unknown function | unknown function | -1 | 59277 | 59792 |
| AVE00340.1 | MG757162_p52 | hypothetical protein | phrog_7912 | unknown function | unknown function | -1 | 46649 | 46810 |
| AVE00343.1 | MG757162_p55 | DNA primase/polymerase | phrog_906 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | -1 | 47703 | 50459 |
| AVE00373.1 | MG757162_p87 | hypothetical protein | phrog_2972 | unknown function | unknown function | -1 | 64882 | 65184 |
| AVE00349.1 | MG757162_p62 | hypothetical protein | phrog_982 | unknown function | unknown function | -1 | 54093 | 54395 |
| AVE00335.1 | MG757162_p47 | lysin A | phrog_317 | endolysin | lysis | 1 | 40784 | 42295 |
| AVE00359.1 | MG757162_p72 | hypothetical protein | phrog_4461 | unknown function | unknown function | -1 | 58955 | 59059 |
| AVE00337.1 | MG757162_p49 | hypothetical protein | phrog_870 | unknown function | unknown function | -1 | 42945 | 43484 |
| AVE00380.1 | MG757162_p61 | hypothetical protein | phrog_25856 | unknown function | unknown function | -1 | 53869 | 53976 |
| AVE00306.1 | MG757162_p18 | hypothetical protein | phrog_2272 | unknown function | unknown function | 1 | 16136 | 16678 |
| AVE00355.1 | MG757162_p68 | hypothetical protein | phrog_1031 | unknown function | unknown function | 1 | 56768 | 57301 |
| AVE00328.1 | MG757162_p40 | hypothetical protein | phrog_915 | unknown function | unknown function | 1 | 37406 | 37762 |
| AVE00297.1 | MG757162_p9 | resolvase | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 6474 | 7049 |
| AVE00369.1 | MG757162_p83 | hypothetical protein | phrog_6719 | unknown function | unknown function | -1 | 62238 | 62732 |
| AVE00375.1 | MG757162_p89 | hypothetical protein | phrog_8227 | unknown function | unknown function | -1 | 65355 | 65492 |
| AVE00376.1 | MG757162_p90 | hypothetical protein | phrog_7256 | unknown function | unknown function | -1 | 65489 | 65821 |
| AVE00336.1 | MG757162_p48 | holin | phrog_526 | holin | lysis | 1 | 42295 | 42828 |
| AVE00327.1 | MG757162_p39 | hypothetical protein | phrog_3329 | unknown function | unknown function | 1 | 36062 | 37375 |
| AVE00341.1 | MG757162_p53 | hypothetical protein | phrog_3892 | unknown function | unknown function | -1 | 46812 | 47147 |
| AVE00362.1 | MG757162_p75 | hypothetical protein | phrog_8177 | unknown function | unknown function | -1 | 59786 | 60064 |
| AVE00374.1 | MG757162_p88 | hypothetical protein | phrog_7689 | unknown function | unknown function | -1 | 65212 | 65358 |
| AVE00332.1 | MG757162_p44 | HTH DNA binding domain protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 39223 | 39429 |
| AVE00351.1 | MG757162_p64 | hypothetical protein | phrog_996 | unknown function | unknown function | 1 | 54736 | 55470 |
| AVE00354.1 | MG757162_p67 | HTH DNA binding domain protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 56110 | 56766 |
| AVE00299.1 | MG757162_p11 | hypothetical protein | phrog_781 | unknown function | unknown function | 1 | 7363 | 7701 |
| AVE00348.1 | MG757162_p60 | hypothetical protein | phrog_3835 | unknown function | unknown function | -1 | 53362 | 53832 |
| AVE00379.1 | MG757162_p93 | hypothetical protein | phrog_7435 | unknown function | unknown function | -1 | 66482 | 67237 |
| AVE00352.1 | MG757162_p65 | ribbon-helix-helix DNA binding protein | phrog_1016 | unknown function | unknown function | 1 | 55480 | 55740 |
| AVE00311.1 | MG757162_p23 | hypothetical protein | phrog_1318 | unknown function | unknown function | -1 | 18828 | 19019 |
| AVE00315.1 | MG757162_p27 | tail assembly chaperone | phrog_5 | tail completion or Neck1 protein | connector | 1 | 20834 | 21262 |
| AVE00321.1 | MG757162_p33 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 32684 | 33847 |
| AVE00381.1 | MG757162_p81 | hypothetical protein | phrog_8500 | unknown function | unknown function | -1 | 61866 | 62027 |
| AVE00338.1 | MG757162_p50 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43499 | 44866 |
| AVE00326.1 | MG757162_p38 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 35466 | 36065 |
| AVE00342.1 | MG757162_p54 | hypothetical protein | phrog_1371 | unknown function | unknown function | -1 | 47147 | 47638 |
| AVE00331.1 | MG757162_p43 | hydrolase | phrog_2804 | virion structural protein | head and packaging | 1 | 38531 | 39226 |
| AVE00357.1 | MG757162_p70 | HTH DNA binding domain protein | phrog_928 | unknown function | unknown function | 1 | 57722 | 58435 |
| AVE00339.1 | MG757162_p51 | DNA helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 44863 | 46578 |
| AVE00365.1 | MG757162_p78 | hypothetical protein | phrog_8341 | unknown function | unknown function | -1 | 60743 | 60988 |
| AVE00358.1 | MG757162_p71 | HNH endonuclease | phrog_960 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 58666 | 58968 |
| AVE00304.1 | MG757162_p16 | hypothetical protein | phrog_779 | unknown function | unknown function | 1 | 14532 | 15350 |
| AVE00370.1 | MG757162_p84 | hypothetical protein | phrog_7394 | unknown function | unknown function | -1 | 62799 | 63020 |
| AVE00347.1 | MG757162_p59 | hypothetical protein | phrog_993 | unknown function | unknown function | -1 | 52874 | 53365 |
| AVE00372.1 | MG757162_p86 | hypothetical protein | phrog_1221 | unknown function | unknown function | -1 | 63737 | 64807 |
| AVE00324.1 | MG757162_p36 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 34676 | 35320 |
| AVE00316.1 | MG757162_p28 | tail assembly chaperone | phrog_6941 | unknown function | unknown function | 1 | 21317 | 21802 |
| AVE00371.1 | MG757162_p85 | hypothetical protein | phrog_1010 | unknown function | unknown function | -1 | 63130 | 63726 |
| AVE00377.1 | MG757162_p91 | hypothetical protein | phrog_9162 | unknown function | unknown function | -1 | 65818 | 66192 |
| AVE00364.1 | MG757162_p77 | hypothetical protein | phrog_7367 | unknown function | unknown function | -1 | 60369 | 60680 |
| AVE00302.1 | MG757162_p14 | hypothetical protein | phrog_2069 | unknown function | unknown function | 1 | 12064 | 12237 |
| AVE00322.1 | MG757162_p34 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 33877 | 34266 |
| AVE00300.1 | MG757162_p12 | portal protein | phrog_776 | portal protein | head and packaging | 1 | 7728 | 9617 |
| AVE00307.1 | MG757162_p19 | hypothetical protein | phrog_2344 | unknown function | unknown function | 1 | 16702 | 17157 |
| AVE00367.1 | MG757162_p80 | hypothetical protein | phrog_7479 | unknown function | unknown function | -1 | 61451 | 61876 |
| AVE00353.1 | MG757162_p66 | hypothetical protein | phrog_7544 | unknown function | unknown function | 1 | 55772 | 56113 |
| AVE00317.1 | MG757162_p29 | tape measure protein | phrog_934 | tail length tape measure protein | tail | 1 | 21828 | 27467 |
| AVE00366.1 | MG757162_p79 | hypothetical protein | phrog_7525 | unknown function | unknown function | -1 | 61086 | 61403 |
| AVE00314.1 | MG757162_p26 | hypothetical protein | phrog_901 | unknown function | unknown function | 1 | 20481 | 20834 |
| AVE00309.1 | MG757162_p21 | major tail protein | phrog_792 | major tail protein | tail | 1 | 17576 | 18655 |
| AVE00329.1 | MG757162_p41 | hypothetical protein | phrog_941 | unknown function | unknown function | 1 | 37723 | 38088 |
| AVE00325.1 | MG757162_p37 | hypothetical protein | phrog_8248 | unknown function | unknown function | 1 | 35317 | 35469 |
| AVE00308.1 | MG757162_p20 | hypothetical protein | phrog_2525 | unknown function | unknown function | 1 | 17154 | 17486 |
| AVE00323.1 | MG757162_p35 | hypothetical protein | phrog_948 | unknown function | unknown function | 1 | 34275 | 34664 |
| AVE00344.1 | MG757162_p56 | hypothetical protein | phrog_2526 | unknown function | unknown function | -1 | 50504 | 50668 |
| AVE00296.1 | MG757162_p8 | hypothetical protein | phrog_5935 | unknown function | unknown function | -1 | 5921 | 6391 |
| AVE00301.1 | MG757162_p13 | capsid morphogenesis protein | phrog_859 | portal protein | head and packaging | 1 | 9617 | 12064 |
| AVE00295.1 | MG757162_p7 | terminase | phrog_38 | terminase large subunit | head and packaging | 1 | 4230 | 5924 |
| AVE00363.1 | MG757162_p76 | hypothetical protein | phrog_7463 | unknown function | unknown function | -1 | 60061 | 60372 |
| AVE00319.1 | MG757162_p31 | minor tail protein | phrog_837 | minor tail protein | tail | 1 | 28915 | 29964 |
| AVE00313.1 | MG757162_p25 | hypothetical protein | phrog_810 | unknown function | unknown function | 1 | 19912 | 20472 |
| AVE00350.1 | MG757162_p63 | hypothetical protein | phrog_8754 | unknown function | unknown function | 1 | 54513 | 54782 |
| AVE00305.1 | MG757162_p17 | hypothetical protein | phrog_970 | unknown function | unknown function | 1 | 15350 | 16099 |
| AVE00312.1 | MG757162_p24 | hypothetical protein | phrog_783 | head-tail adaptor | connector | 1 | 19130 | 19915 |
| AVE00333.1 | MG757162_p45 | HTH DNA binding domain protein | phrog_955 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 39460 | 39849 |
| AVE00368.1 | MG757162_p82 | hypothetical protein | phrog_1933 | unknown function | unknown function | -1 | 62029 | 62241 |
| AVE00320.1 | MG757162_p32 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 29961 | 32681 |