| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG765276 |
Definition |
Lactobacillus phage Nyseid, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Tybeckvirinae; Lenusvirus; Lactobacillus virus Nyseid. |
DB of origin |
NUCCORE |
Length |
79221 |
Host Name |
Lactobacillus plantarum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
125 |
%GC |
37.06 |
Number of singletons |
5 |
Number of paralogs |
5 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUV59873.1 | MG765276_p113 | hypothetical protein | phrog_12 | portal protein | head and packaging | -1 | 70151 | 71464 |
| AUV59814.1 | MG765276_p54 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 23984 | 24622 |
| AUV59874.1 | MG765276_p114 | hypothetical protein | phrog_9 | terminase large subunit | head and packaging | -1 | 71606 | 73315 |
| AUV59788.1 | MG765276_p28 | hypothetical protein | phrog_17195 | unknown function | unknown function | -1 | 11032 | 11229 |
| AUV59806.1 | MG765276_p46 | hypothetical protein | phrog_4680 | unknown function | unknown function | -1 | 19912 | 20376 |
| AUV59766.1 | MG765276_p6 | hypothetical protein | phrog_18130 | unknown function | unknown function | -1 | 2947 | 3105 |
| AUV59833.1 | MG765276_p73 | hypothetical protein | phrog_28654 | unknown function | unknown function | 1 | 35137 | 35325 |
| AUV59767.1 | MG765276_p7 | hypothetical protein | phrog_8645 | unknown function | unknown function | -1 | 3121 | 3411 |
| AUV59850.1 | MG765276_p90 | hypothetical protein | phrog_17034 | unknown function | unknown function | 1 | 41312 | 41638 |
| AUV59869.1 | MG765276_p109 | hypothetical protein | phrog_40 | head-tail adaptor Ad1 | connector | -1 | 66954 | 67247 |
| AUV59798.1 | MG765276_p38 | hypothetical protein | phrog_26175 | unknown function | unknown function | -1 | 13722 | 13994 |
| AUV59812.1 | MG765276_p52 | hypothetical protein | phrog_15734 | unknown function | unknown function | -1 | 22388 | 22672 |
| AUV59876.1 | MG765276_p116 | hypothetical protein | phrog_83 | terminase small subunit | head and packaging | -1 | 75011 | 75514 |
| AUV59878.1 | MG765276_p118 | hypothetical protein | phrog_26511 | unknown function | unknown function | -1 | 76221 | 76496 |
| AUV59822.1 | MG765276_p62 | hypothetical protein | phrog_23339 | unknown function | unknown function | 1 | 28369 | 28572 |
| AUV59803.1 | MG765276_p43 | hypothetical protein | phrog_2484 | RecJ-like ssDNA exonuclease | DNA, RNA and nucleotide metabolism | -1 | 15546 | 17291 |
| AUV59844.1 | MG765276_p84 | hypothetical protein | phrog_25186 | unknown function | unknown function | 1 | 39508 | 39738 |
| AUV59799.1 | MG765276_p39 | hypothetical protein | phrog_7591 | unknown function | unknown function | -1 | 13996 | 14274 |
| AUV59826.1 | MG765276_p66 | hypothetical protein | phrog_37127 | unknown function | unknown function | 1 | 30788 | 30994 |
| AUV59835.1 | MG765276_p75 | hypothetical protein | phrog_14545 | unknown function | unknown function | 1 | 35756 | 36079 |
| AUV59804.1 | MG765276_p44 | hypothetical protein | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 17294 | 18322 |
| AUV59832.1 | MG765276_p72 | DNA-cytosine methyltransferase | phrog_116 | DNA methyltransferase | other | 1 | 33016 | 35136 |
| AUV59773.1 | MG765276_p13 | hypothetical protein | phrog_3784 | unknown function | unknown function | -1 | 6344 | 6778 |
| AUV59829.1 | MG765276_p69 | hypothetical protein | phrog_11757 | unknown function | unknown function | 1 | 31773 | 32165 |
| AUV59780.1 | MG765276_p20 | hypothetical protein | phrog_25564 | unknown function | unknown function | -1 | 8359 | 8607 |
| AUV59842.1 | MG765276_p82 | hypothetical protein | phrog_22118 | unknown function | unknown function | 1 | 38683 | 38964 |
| AUV59785.1 | MG765276_p25 | hypothetical protein | singleton | unknown function | unknown function | -1 | 9999 | 10271 |
| AUV59817.1 | MG765276_p57 | hypothetical protein | phrog_15790 | unknown function | unknown function | 1 | 25257 | 25523 |
| AUV59845.1 | MG765276_p85 | hypothetical protein | phrog_22425 | unknown function | unknown function | 1 | 39731 | 39958 |
| AUV59865.1 | MG765276_p105 | hypothetical protein | phrog_88 | major tail protein | tail | -1 | 65068 | 65679 |
| AUV59847.1 | MG765276_p87 | hypothetical protein | phrog_22812 | unknown function | unknown function | 1 | 40445 | 40714 |
| AUV59831.1 | MG765276_p71 | SAM-dependent methyltransferase | phrog_954 | DNA methyltransferase | other | 1 | 32531 | 33016 |
| AUV59854.1 | MG765276_p94 | hypothetical protein | phrog_13404 | holin | lysis | -1 | 46980 | 47402 |
| AUV59862.1 | MG765276_p102 | hypothetical protein | phrog_202 | distal tail protein Dit | tail | -1 | 56791 | 58569 |
| AUV59769.1 | MG765276_p9 | hypothetical protein | phrog_27864 | unknown function | unknown function | -1 | 3723 | 4049 |
| AUV59771.1 | MG765276_p11 | hypothetical protein | phrog_38569 | unknown function | unknown function | -1 | 5531 | 5668 |
| AUV59805.1 | MG765276_p45 | hypothetical protein | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 18330 | 19928 |
| AUV59782.1 | MG765276_p22 | hypothetical protein | phrog_13264 | unknown function | unknown function | -1 | 9001 | 9291 |
| AUV59840.1 | MG765276_p80 | hypothetical protein | phrog_28164 | unknown function | unknown function | 1 | 37944 | 38243 |
| AUV59868.1 | MG765276_p108 | hypothetical protein | phrog_25 | head closure Hc1 | connector | -1 | 66519 | 66941 |
| AUV59763.1 | MG765276_p3 | hypothetical protein | phrog_27074 | unknown function | unknown function | -1 | 1519 | 2007 |
| AUV59867.1 | MG765276_p107 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | -1 | 66074 | 66538 |
| AUV59830.1 | MG765276_p70 | hypothetical protein | phrog_19275 | unknown function | unknown function | 1 | 32167 | 32499 |
| AUV59793.1 | MG765276_p33 | hypothetical protein | phrog_30056 | unknown function | unknown function | -1 | 12320 | 12445 |
| AUV59800.1 | MG765276_p40 | hypothetical protein | phrog_7591 | unknown function | unknown function | -1 | 14289 | 14519 |
| AUV59881.1 | MG765276_p121 | hypothetical protein | phrog_9246 | unknown function | unknown function | 1 | 77760 | 78113 |
| AUV59884.1 | MG765276_p124 | hypothetical protein | phrog_24500 | unknown function | unknown function | 1 | 78828 | 79061 |
| AUV59786.1 | MG765276_p26 | hypothetical protein | phrog_32524 | unknown function | unknown function | -1 | 10281 | 10499 |
| AUV59843.1 | MG765276_p83 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38957 | 39145 |
| AUV59808.1 | MG765276_p48 | hypothetical protein | phrog_761 | thymidylate kinase | other | -1 | 20640 | 21338 |
| AUV59841.1 | MG765276_p81 | hypothetical protein | phrog_35912 | unknown function | unknown function | 1 | 38246 | 38506 |
| AUV59839.1 | MG765276_p79 | hypothetical protein | phrog_26567 | unknown function | unknown function | 1 | 37676 | 37942 |
| AUV59828.1 | MG765276_p68 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 31164 | 31484 |
| AUV59790.1 | MG765276_p30 | hypothetical protein | phrog_4019 | unknown function | unknown function | -1 | 11371 | 11697 |
| AUV59821.1 | MG765276_p61 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 27318 | 28379 |
| AUV59859.1 | MG765276_p99 | hypothetical protein | phrog_11075 | unknown function | unknown function | -1 | 50788 | 51009 |
| AUV59807.1 | MG765276_p47 | hypothetical protein | phrog_16438 | unknown function | unknown function | -1 | 20442 | 20636 |
| AUV59863.1 | MG765276_p103 | tail length tape-measure protein | phrog_167 | tail length tape measure protein | tail | -1 | 58632 | 64292 |
| AUV59776.1 | MG765276_p16 | hypothetical protein | phrog_17627 | unknown function | unknown function | -1 | 7470 | 7646 |
| AUV59882.1 | MG765276_p122 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 78139 | 78567 |
| AUV59794.1 | MG765276_p34 | hypothetical protein | phrog_28480 | unknown function | unknown function | -1 | 12460 | 12609 |
| AUV59880.1 | MG765276_p120 | hypothetical protein | phrog_18814 | unknown function | unknown function | 1 | 77578 | 77748 |
| AUV59770.1 | MG765276_p10 | hypothetical protein | phrog_1494 | unknown function | unknown function | -1 | 5340 | 5534 |
| AUV59816.1 | MG765276_p56 | hypothetical protein | phrog_16289 | unknown function | unknown function | 1 | 25067 | 25246 |
| AUV59802.1 | MG765276_p42 | hypothetical protein | phrog_24165 | unknown function | unknown function | -1 | 14813 | 15355 |
| AUV59768.1 | MG765276_p8 | hypothetical protein | phrog_16248 | unknown function | unknown function | -1 | 3437 | 3691 |
| AUV59837.1 | MG765276_p77 | hypothetical protein | phrog_4602 | transglycosylase | other | 1 | 36715 | 37320 |
| AUV59834.1 | MG765276_p74 | hypothetical protein | phrog_1936 | MazF-like growth inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 35394 | 35759 |
| AUV59872.1 | MG765276_p112 | hypothetical protein | phrog_13042 | major head protein | head and packaging | -1 | 69121 | 70041 |
| AUV59762.1 | MG765276_p2 | hypothetical protein | phrog_14183 | unknown function | unknown function | -1 | 997 | 1431 |
| AUV59851.1 | MG765276_p91 | DNA polymerase III alpha subunit | phrog_405 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 41797 | 45657 |
| AUV59848.1 | MG765276_p88 | hypothetical protein | phrog_14203 | unknown function | unknown function | 1 | 40717 | 41004 |
| AUV59824.1 | MG765276_p64 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 28762 | 29985 |
| AUV59783.1 | MG765276_p23 | hypothetical protein | phrog_3784 | unknown function | unknown function | -1 | 9315 | 9752 |
| AUV59765.1 | MG765276_p5 | hypothetical protein | phrog_10700 | unknown function | unknown function | -1 | 2408 | 2782 |
| AUV59877.1 | MG765276_p117 | hypothetical protein | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 75519 | 75962 |
| AUV59772.1 | MG765276_p12 | hypothetical protein | phrog_15366 | unknown function | unknown function | -1 | 5716 | 6291 |
| AUV59778.1 | MG765276_p18 | hypothetical protein | phrog_29961 | unknown function | unknown function | -1 | 7968 | 8165 |
| AUV59764.1 | MG765276_p4 | hypothetical protein | singleton | unknown function | unknown function | -1 | 2054 | 2302 |
| AUV59879.1 | MG765276_p119 | hypothetical protein | phrog_13887 | unknown function | unknown function | 1 | 76866 | 77528 |
| AUV59813.1 | MG765276_p53 | hypothetical protein | phrog_24710 | unknown function | unknown function | -1 | 22665 | 22955 |
| AUV59849.1 | MG765276_p89 | hypothetical protein | phrog_15801 | unknown function | unknown function | 1 | 40991 | 41311 |
| AUV59791.1 | MG765276_p31 | hypothetical protein | phrog_98 | unknown function | unknown function | -1 | 11703 | 12137 |
| AUV59855.1 | MG765276_p95 | hypothetical protein | phrog_1009 | unknown function | unknown function | -1 | 47389 | 47685 |
| AUV59871.1 | MG765276_p111 | hypothetical protein | phrog_10 | major head protein | head and packaging | -1 | 67851 | 69155 |
| AUV59860.1 | MG765276_p100 | hypothetical protein | phrog_7660 | tail fiber protein | tail | -1 | 51002 | 54337 |
| AUV59801.1 | MG765276_p41 | hypothetical protein | phrog_7591 | unknown function | unknown function | -1 | 14530 | 14811 |
| AUV59858.1 | MG765276_p98 | hypothetical protein | phrog_1401 | unknown function | unknown function | -1 | 50352 | 50774 |
| AUV59825.1 | MG765276_p65 | NrdR-regulated deoxyribonucleotide transporter, PnuC-like | phrog_1880 | PnuC-like nicotinamide mononucleotide transport | moron, auxiliary metabolic gene and host takeover | 1 | 30004 | 30768 |
| AUV59818.1 | MG765276_p58 | hypothetical protein | phrog_190 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 25501 | 25938 |
| AUV59781.1 | MG765276_p21 | hypothetical protein | phrog_17062 | unknown function | unknown function | -1 | 8597 | 9001 |
| AUV59885.1 | MG765276_p125 | hypothetical protein | singleton | unknown function | unknown function | -1 | 79058 | 79219 |
| AUV59846.1 | MG765276_p86 | hypothetical protein | phrog_28763 | unknown function | unknown function | 1 | 40057 | 40455 |
| AUV59864.1 | MG765276_p104 | hypothetical protein | phrog_1346 | tail protein | tail | -1 | 64570 | 64980 |
| AUV59856.1 | MG765276_p96 | glycosylhydrolase | phrog_291 | endolysin | lysis | -1 | 47688 | 49073 |
| AUV59857.1 | MG765276_p97 | hypothetical protein | phrog_20633 | tail protein | tail | -1 | 49136 | 50335 |
| AUV59792.1 | MG765276_p32 | hypothetical protein | phrog_1997 | unknown function | unknown function | -1 | 12134 | 12307 |
| AUV59761.1 | MG765276_p1 | hypothetical protein | phrog_26589 | unknown function | unknown function | -1 | 693 | 995 |
| AUV59784.1 | MG765276_p24 | hypothetical protein | phrog_19873 | unknown function | unknown function | -1 | 9755 | 9952 |
| AUV59775.1 | MG765276_p15 | hypothetical protein | phrog_419 | unknown function | unknown function | -1 | 7006 | 7473 |
| AUV59787.1 | MG765276_p27 | hypothetical protein | phrog_22698 | unknown function | unknown function | -1 | 10489 | 10965 |
| AUV59875.1 | MG765276_p115 | hypothetical protein | phrog_6282 | unknown function | unknown function | -1 | 74365 | 74874 |
| AUV59777.1 | MG765276_p17 | hypothetical protein | phrog_22959 | unknown function | unknown function | -1 | 7658 | 7978 |
| AUV59838.1 | MG765276_p78 | hypothetical protein | phrog_31429 | unknown function | unknown function | 1 | 37408 | 37674 |
| AUV59820.1 | MG765276_p60 | hypothetical protein | phrog_2367 | unknown function | unknown function | 1 | 26317 | 27285 |
| AUV59852.1 | MG765276_p92 | hypothetical protein | phrog_13351 | unknown function | unknown function | -1 | 45693 | 45938 |
| AUV59853.1 | MG765276_p93 | hypothetical protein | phrog_1 | integrase | integration and excision | -1 | 45949 | 46923 |
| AUV59779.1 | MG765276_p19 | hypothetical protein | phrog_24546 | unknown function | unknown function | -1 | 8166 | 8372 |
| AUV59796.1 | MG765276_p36 | hypothetical protein | phrog_37292 | unknown function | unknown function | -1 | 12987 | 13535 |
| AUV59883.1 | MG765276_p123 | hypothetical protein | phrog_1494 | unknown function | unknown function | 1 | 78570 | 78818 |
| AUV59819.1 | MG765276_p59 | hypothetical protein | phrog_14233 | unknown function | unknown function | 1 | 25932 | 26255 |
| AUV59789.1 | MG765276_p29 | hypothetical protein | phrog_23004 | unknown function | unknown function | -1 | 11219 | 11353 |
| AUV59866.1 | MG765276_p106 | hypothetical protein | phrog_1217 | tail protein | tail | -1 | 65697 | 66074 |
| AUV59827.1 | MG765276_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30984 | 31151 |
| AUV59811.1 | MG765276_p51 | hypothetical protein | phrog_26623 | unknown function | unknown function | -1 | 21975 | 22376 |
| AUV59809.1 | MG765276_p49 | hypothetical protein | phrog_13292 | unknown function | unknown function | -1 | 21338 | 21541 |
| AUV59815.1 | MG765276_p55 | hypothetical protein | phrog_26955 | unknown function | unknown function | 1 | 24664 | 25056 |
| AUV59774.1 | MG765276_p14 | hypothetical protein | phrog_3002 | unknown function | unknown function | -1 | 6794 | 7009 |
| AUV59810.1 | MG765276_p50 | hypothetical protein | phrog_26884 | unknown function | unknown function | -1 | 21554 | 21859 |
| AUV59823.1 | MG765276_p63 | hypothetical protein | phrog_24137 | unknown function | unknown function | 1 | 28565 | 28762 |
| AUV59870.1 | MG765276_p110 | hypothetical protein | phrog_341 | major tail protein | tail | -1 | 67282 | 67731 |
| AUV59797.1 | MG765276_p37 | hypothetical protein | phrog_1374 | unknown function | unknown function | -1 | 13535 | 13735 |
| AUV59861.1 | MG765276_p101 | hypothetical protein | phrog_4798 | tail protein | tail | -1 | 54349 | 56787 |
| AUV59795.1 | MG765276_p35 | hypothetical protein | phrog_1048 | unknown function | unknown function | -1 | 12698 | 12976 |
| AUV59836.1 | MG765276_p76 | hypothetical protein | phrog_5083 | unknown function | unknown function | 1 | 36082 | 36630 |