| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG770213 |
Definition |
Mycobacterium phage OldBen, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus. |
DB of origin |
NUCCORE |
Length |
57159 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
101 |
%GC |
61.48 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUV60519.1 | MG770213_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14778 | 16487 |
| AUV60587.1 | MG770213_p86 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 51360 | 51497 |
| AUV60597.1 | MG770213_p96 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 53973 | 54215 |
| AUV60548.1 | MG770213_p45 | hypothetical protein | phrog_15279 | unknown function | unknown function | 1 | 34748 | 35683 |
| AUV60546.1 | MG770213_p43 | immunity repressor | phrog_3949 | transcriptional repressor | transcription regulation | -1 | 33696 | 34181 |
| AUV60574.1 | MG770213_p72 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 47071 | 47205 |
| AUV60601.1 | MG770213_p100 | glycosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 56038 | 56661 |
| AUV60540.1 | MG770213_p37 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 30539 | 30631 |
| AUV60511.1 | MG770213_p8 | head-to-tail connector complex protein | phrog_763 | head-tail adaptor | connector | 1 | 6443 | 6772 |
| AUV60599.1 | MG770213_p98 | galactosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 54396 | 55832 |
| AUV60541.1 | MG770213_p38 | hypothetical protein | phrog_3693 | unknown function | unknown function | -1 | 30669 | 30803 |
| AUV60592.1 | MG770213_p91 | HTH DNA-binding domain protein | phrog_2474 | MerR-like transcriptional regulator | transcription regulation | 1 | 52841 | 53065 |
| AUV60510.1 | MG770213_p7 | head-to-tail connector complex protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5877 | 6446 |
| AUV60603.1 | MG770213_p63 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 42694 | 43056 |
| AUV60576.1 | MG770213_p74 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 48057 | 48320 |
| AUV60588.1 | MG770213_p87 | hypothetical protein | phrog_4126 | unknown function | unknown function | 1 | 51494 | 51613 |
| AUV60572.1 | MG770213_p70 | hypothetical protein | phrog_780 | unknown function | unknown function | 1 | 46182 | 46409 |
| AUV60505.1 | MG770213_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 571 | 2208 |
| AUV60573.1 | MG770213_p71 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 46406 | 47074 |
| AUV60533.1 | MG770213_p30 | lysin A | phrog_700 | endolysin | lysis | 1 | 26283 | 27554 |
| AUV60584.1 | MG770213_p82 | hypothetical protein | phrog_2939 | unknown function | unknown function | 1 | 50483 | 50725 |
| AUV60586.1 | MG770213_p85 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 51176 | 51355 |
| AUV60596.1 | MG770213_p95 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 53575 | 53976 |
| AUV60516.1 | MG770213_p12 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8532 | 9468 |
| AUV60598.1 | MG770213_p97 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 54208 | 54369 |
| AUV60554.1 | MG770213_p51 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 37594 | 38172 |
| AUV60560.1 | MG770213_p57 | HTH DNA-binding protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40129 | 40494 |
| AUV60527.1 | MG770213_p24 | minor tail protein | phrog_754 | minor tail protein | tail | 1 | 24234 | 25058 |
| AUV60518.1 | MG770213_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 13011 | 14720 |
| AUV60504.1 | MG770213_p1 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 108 | 563 |
| AUV60535.1 | MG770213_p32 | holin | phrog_443 | holin | lysis | 1 | 28571 | 28804 |
| AUV60561.1 | MG770213_p58 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 40494 | 40649 |
| AUV60580.1 | MG770213_p78 | hypothetical protein | phrog_1546 | unknown function | unknown function | 1 | 49016 | 49744 |
| AUV60547.1 | MG770213_p44 | hypothetical protein | phrog_6267 | transcriptional repressor | transcription regulation | 1 | 34446 | 34688 |
| AUV60522.1 | MG770213_p19 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 19904 | 21793 |
| AUV60602.1 | MG770213_p101 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 56661 | 56987 |
| AUV60577.1 | MG770213_p75 | hypothetical protein | phrog_6275 | unknown function | unknown function | 1 | 48317 | 48697 |
| AUV60585.1 | MG770213_p84 | hypothetical protein | phrog_6625 | unknown function | unknown function | 1 | 50889 | 51179 |
| AUV60604.1 | MG770213_p83 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 50722 | 50916 |
| AUV60582.1 | MG770213_p80 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 50018 | 50296 |
| AUV60551.1 | MG770213_p48 | HTH protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 36698 | 36985 |
| AUV60593.1 | MG770213_p92 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 53062 | 53226 |
| AUV60523.1 | MG770213_p20 | minor tail protein | phrog_2106 | minor tail protein | tail | 1 | 21790 | 22953 |
| AUV60532.1 | MG770213_p29 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 26053 | 26286 |
| AUV60557.1 | MG770213_p54 | WhiB family transcription factor | phrog_1333 | unknown function | unknown function | 1 | 38875 | 39369 |
| AUV60515.1 | MG770213_p13 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8532 | 9083 |
| AUV60525.1 | MG770213_p22 | minor tail protein | phrog_2005 | minor tail protein | tail | 1 | 23331 | 23585 |
| AUV60570.1 | MG770213_p68 | methylase | phrog_116 | DNA methyltransferase | other | 1 | 44406 | 46037 |
| AUV60513.1 | MG770213_p10 | head-to-tail connector complex protein | phrog_813 | head-tail adaptor | connector | 1 | 7095 | 7499 |
| AUV60581.1 | MG770213_p79 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 49741 | 50025 |
| AUV60520.1 | MG770213_p17 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 16543 | 17373 |
| AUV60531.1 | MG770213_p28 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 25852 | 25986 |
| AUV60530.1 | MG770213_p27 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 25706 | 25855 |
| AUV60600.1 | MG770213_p99 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 55835 | 56041 |
| AUV60565.1 | MG770213_p62 | hypothetical protein | phrog_4657 | unknown function | unknown function | 1 | 42089 | 42697 |
| AUV60562.1 | MG770213_p59 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 40649 | 40879 |
| AUV60555.1 | MG770213_p52 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 38250 | 38531 |
| AUV60509.1 | MG770213_p6 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 5047 | 5868 |
| AUV60528.1 | MG770213_p25 | HTH DNA-binding domain protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25062 | 25253 |
| AUV60575.1 | MG770213_p73 | hypothetical protein | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 47209 | 48060 |
| AUV60566.1 | MG770213_p64 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 43053 | 43238 |
| AUV60567.1 | MG770213_p65 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 43231 | 43371 |
| AUV60538.1 | MG770213_p35 | DnaQ-like exonuclease | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29419 | 30240 |
| AUV60549.1 | MG770213_p46 | hypothetical protein | phrog_1033 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 35680 | 36489 |
| AUV60568.1 | MG770213_p66 | hypothetical protein | phrog_2259 | Rnase H | DNA, RNA and nucleotide metabolism | 1 | 43364 | 44017 |
| AUV60578.1 | MG770213_p76 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 48697 | 48891 |
| AUV60514.1 | MG770213_p11 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 7609 | 8418 |
| AUV60526.1 | MG770213_p23 | minor tail protein | phrog_2012 | minor tail protein | tail | 1 | 23599 | 24237 |
| AUV60512.1 | MG770213_p9 | hypothetical protein | phrog_1929 | head-tail connector protein | connector | 1 | 6779 | 7105 |
| AUV60558.1 | MG770213_p55 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 39366 | 39851 |
| AUV60539.1 | MG770213_p36 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 30295 | 30546 |
| AUV60579.1 | MG770213_p77 | hypothetical protein | phrog_9840 | unknown function | unknown function | 1 | 48888 | 49019 |
| AUV60506.1 | MG770213_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2239 | 3609 |
| AUV60569.1 | MG770213_p67 | hypothetical protein | phrog_6650 | unknown function | unknown function | 1 | 44014 | 44409 |
| AUV60537.1 | MG770213_p34 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 29199 | 29432 |
| AUV60534.1 | MG770213_p31 | lysin B | phrog_102 | endolysin | lysis | 1 | 27554 | 28555 |
| AUV60590.1 | MG770213_p89 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 51839 | 52090 |
| AUV60550.1 | MG770213_p47 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 36486 | 36701 |
| AUV60507.1 | MG770213_p4 | capsid maturation protease | phrog_1522 | head maturation protease | head and packaging | 1 | 3596 | 4351 |
| AUV60583.1 | MG770213_p81 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | 1 | 50293 | 50460 |
| AUV60545.1 | MG770213_p42 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 32978 | 33433 |
| AUV60517.1 | MG770213_p14 | tape measure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 9486 | 13010 |
| AUV60553.1 | MG770213_p50 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 37409 | 37597 |
| AUV60536.1 | MG770213_p33 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 28801 | 29175 |
| AUV60521.1 | MG770213_p18 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 17370 | 19907 |
| AUV60544.1 | MG770213_p41 | integrase | phrog_1 | integrase | integration and excision | 1 | 31598 | 32899 |
| AUV60543.1 | MG770213_p40 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 30954 | 31166 |
| AUV60594.1 | MG770213_p93 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 53232 | 53390 |
| AUV60595.1 | MG770213_p94 | hypothetical protein | phrog_3813 | unknown function | unknown function | 1 | 53387 | 53578 |
| AUV60563.1 | MG770213_p60 | hypothetical protein | phrog_2632 | unknown function | unknown function | 1 | 40876 | 41118 |
| AUV60559.1 | MG770213_p56 | hypothetical protein | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 39848 | 40132 |
| AUV60524.1 | MG770213_p21 | minor tail protein | phrog_240 | head protein | head and packaging | 1 | 22967 | 23308 |
| AUV60529.1 | MG770213_p26 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 25403 | 25699 |
| AUV60564.1 | MG770213_p61 | DNA recombinase | phrog_1366 | unknown function | unknown function | 1 | 41115 | 42092 |
| AUV60508.1 | MG770213_p5 | scaffolding protein | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4378 | 5028 |
| AUV60591.1 | MG770213_p90 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 52087 | 52731 |
| AUV60556.1 | MG770213_p53 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 38528 | 38875 |
| AUV60571.1 | MG770213_p69 | hypothetical protein | phrog_2001 | unknown function | unknown function | 1 | 46063 | 46185 |
| AUV60589.1 | MG770213_p88 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 51610 | 51846 |
| AUV60542.1 | MG770213_p39 | hypothetical protein | phrog_2437 | unknown function | unknown function | -1 | 30803 | 30952 |
| AUV60552.1 | MG770213_p49 | hypothetical protein | phrog_2021 | unknown function | unknown function | 1 | 37029 | 37412 |