Genomic map of Gordonia phage Troje (MG770215)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG770215
Definition
Gordonia phage Troje, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Emalynvirus; Gordonia virus Troje.
DB of origin
NUCCORE
Length
45909
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
71
%GC
60.37
Number of singletons
6
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUV60745.1 MG770215_p39 hypothetical protein phrog_10015 unknown function unknown function -1 27305 27463
AUV60754.1 MG770215_p49 hypothetical protein phrog_27770 unknown function unknown function -1 34404 34550
AUV60767.1 MG770215_p62 hypothetical protein phrog_19638 unknown function unknown function 1 42803 43099
AUV60714.1 MG770215_p8 major capsid protein phrog_10 major head protein head and packaging 1 5370 6326
AUV60746.1 MG770215_p40 hypothetical protein singleton unknown function unknown function -1 27467 27694
AUV60744.1 MG770215_p38 hypothetical protein phrog_5845 unknown function unknown function -1 26913 27308
AUV60739.1 MG770215_p33 hypothetical protein phrog_16498 unknown function unknown function -1 25266 25622
AUV60776.1 MG770215_p3 hypothetical protein singleton unknown function unknown function 1 989 1072
AUV60765.1 MG770215_p60 DNA recombinase phrog_3123 unknown function unknown function 1 40095 42092
AUV60747.1 MG770215_p41 hypothetical protein phrog_14876 DNA polymerase DNA, RNA and nucleotide metabolism -1 27737 28273
AUV60727.1 MG770215_p21 lysin A, glycosyl hydrolase domain phrog_3084 endolysin lysis 1 18059 19021
AUV60726.1 MG770215_p20 lysin A, L-ala-D-glu peptidase domain phrog_1512 endolysin lysis 1 17465 18055
AUV60713.1 MG770215_p7 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 4889 5350
AUV60738.1 MG770215_p32 hypothetical protein singleton unknown function unknown function 1 24858 25142
AUV60750.1 MG770215_p45 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 30463 32853
AUV60778.1 MG770215_p70 hypothetical protein phrog_26569 unknown function unknown function 1 45034 45387
AUV60708.1 MG770215_p1 hypothetical protein phrog_226 minor tail protein tail 1 53 535
AUV60749.1 MG770215_p44 hypothetical protein singleton unknown function unknown function -1 30155 30466
AUV60762.1 MG770215_p57 hypothetical protein phrog_17534 unknown function unknown function -1 39255 39428
AUV60723.1 MG770215_p17 minor tail protein phrog_106 minor tail protein tail 1 14394 15365
AUV60730.1 MG770215_p24 hypothetical protein phrog_20118 unknown function unknown function 1 19842 20150
AUV60711.1 MG770215_p5 portal protein phrog_104 portal protein head and packaging 1 2787 4241
AUV60728.1 MG770215_p22 membrane protein phrog_3428 holin lysis 1 19018 19299
AUV60729.1 MG770215_p23 membrane protein phrog_5552 membrane protein moron, auxiliary metabolic gene and host takeover 1 19349 19837
AUV60717.1 MG770215_p11 hypothetical protein phrog_387 neck protein connector 1 7235 7504
AUV60725.1 MG770215_p19 minor tail protein phrog_8122 minor tail protein tail 1 17070 17468
AUV60761.1 MG770215_p56 hypothetical protein phrog_24818 unknown function unknown function -1 38983 39255
AUV60758.1 MG770215_p53 nucleotide pyrophosphohydrolase phrog_12184 nucleotide pyrophosphohydrolase other -1 36547 37002
AUV60736.1 MG770215_p30 hypothetical protein singleton unknown function unknown function -1 23741 24073
AUV60712.1 MG770215_p6 capsid maturation protease phrog_193 head maturation protease head and packaging 1 4216 4839
AUV60715.1 MG770215_p9 head-to-tail connector complex protein phrog_1290 head-tail adaptor connector 1 6392 6904
AUV60734.1 MG770215_p28 hypothetical protein phrog_9930 unknown function unknown function 1 22571 23077
AUV60718.1 MG770215_p12 hypothetical protein phrog_123 tail terminator connector 1 7491 7901
AUV60732.1 MG770215_p26 hypothetical protein phrog_1126 unknown function unknown function 1 21258 21599
AUV60775.1 MG770215_p71 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 45614 45889
AUV60737.1 MG770215_p31 hypothetical protein phrog_18656 unknown function unknown function -1 24146 24778
AUV60763.1 MG770215_p58 hypothetical protein phrog_25068 unknown function unknown function -1 39421 39627
AUV60719.1 MG770215_p13 major tail protein phrog_117 major tail protein tail 1 7910 8755
AUV60759.1 MG770215_p54 nucleotide kinase phrog_761 thymidylate kinase other -1 36999 37511
AUV60771.1 MG770215_p66 hypothetical protein phrog_35008 unknown function unknown function 1 43688 44059
AUV60760.1 MG770215_p55 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 37508 38986
AUV60768.1 MG770215_p63 hypothetical protein phrog_26138 unknown function unknown function 1 43096 43293
AUV60769.1 MG770215_p64 hypothetical protein phrog_37355 unknown function unknown function 1 43296 43478
AUV60710.1 MG770215_p4 terminase phrog_9 terminase large subunit head and packaging 1 1111 2790
AUV60751.1 MG770215_p46 nucleoside deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 32850 33317
AUV60741.1 MG770215_p35 hypothetical protein phrog_26548 unknown function unknown function 1 26216 26311
AUV60774.1 MG770215_p69 hypothetical protein phrog_25464 unknown function unknown function 1 44798 45034
AUV60770.1 MG770215_p65 hypothetical protein phrog_16535 unknown function unknown function 1 43486 43695
AUV60709.1 MG770215_p2 hypothetical protein phrog_34392 unknown function unknown function 1 626 871
AUV60755.1 MG770215_p50 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 34550 35398
AUV60720.1 MG770215_p15 tail assembly chaperone phrog_8595 tail assembly chaperone tail 1 8815 9150
AUV60731.1 MG770215_p25 hypothetical protein phrog_7719 minor tail protein tail 1 20150 21247
AUV60764.1 MG770215_p59 hypothetical protein phrog_13148 unknown function unknown function -1 39624 40067
AUV60772.1 MG770215_p67 hypothetical protein phrog_16564 unknown function unknown function 1 44043 44489
AUV60724.1 MG770215_p18 minor tail protein phrog_110 minor tail protein tail 1 15362 17059
AUV60773.1 MG770215_p68 hypothetical protein phrog_24250 unknown function unknown function 1 44497 44838
AUV60721.1 MG770215_p14 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 8815 9611
AUV60722.1 MG770215_p16 tape measure protein phrog_4197 tail length tape measure protein tail 1 9601 14397
AUV60756.1 MG770215_p51 hypothetical protein phrog_13667 unknown function unknown function -1 35395 36312
AUV60753.1 MG770215_p48 lysin B phrog_102 endolysin lysis -1 33559 34407
AUV60740.1 MG770215_p34 HTH DNA-binding domain protein phrog_15118 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 25827 26219
AUV60777.1 MG770215_p42 DNA recombinase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 28273 29091
AUV60748.1 MG770215_p43 helicase phrog_1218 exonuclease DNA, RNA and nucleotide metabolism -1 29134 30162
AUV60752.1 MG770215_p47 hypothetical protein singleton unknown function unknown function -1 33314 33562
AUV60735.1 MG770215_p29 hypothetical protein phrog_5855 unknown function unknown function -1 23158 23676
AUV60716.1 MG770215_p10 hypothetical protein phrog_763 head-tail adaptor connector 1 6901 7242
AUV60742.1 MG770215_p36 hypothetical protein phrog_34520 unknown function unknown function 1 26366 26581
AUV60757.1 MG770215_p52 hypothetical protein phrog_1581 unknown function unknown function -1 36309 36545
AUV60766.1 MG770215_p61 hypothetical protein phrog_22617 unknown function unknown function 1 42328 42651
AUV60733.1 MG770215_p27 hypothetical protein phrog_21962 tail protein tail 1 21602 22567
AUV60743.1 MG770215_p37 endonuclease phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 26629 26916