| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG770228 |
Definition |
Escherichia phage PMBT57, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Enquatrovirus; unclassified Enquatrovirus. |
DB of origin |
NUCCORE |
Length |
70857 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
74 |
%GC |
41.37 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUV59108.1 | MG770228_p66 | hypothetical protein | phrog_9004 | unknown function | unknown function | 1 | 60382 | 60708 |
| AUV59054.1 | MG770228_p12 | hypothetical protein | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 9644 | 20146 |
| AUV59055.1 | MG770228_p13 | hypothetical protein | phrog_6126 | virion structural protein | head and packaging | -1 | 20247 | 22181 |
| AUV59058.1 | MG770228_p16 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | -1 | 25319 | 26218 |
| AUV59057.1 | MG770228_p15 | hypothetical protein | phrog_2220 | unknown function | unknown function | -1 | 22658 | 25315 |
| AUV59050.1 | MG770228_p8 | hypothetical protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 6299 | 6796 |
| AUV59085.1 | MG770228_p43 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 48079 | 48393 |
| AUV59104.1 | MG770228_p62 | hypothetical protein | phrog_7594 | unknown function | unknown function | 1 | 58107 | 58307 |
| AUV59060.1 | MG770228_p18 | hypothetical protein | phrog_1357 | major head protein | head and packaging | -1 | 26987 | 28192 |
| AUV59045.1 | MG770228_p3 | 3'-phosphatase 5'-polynucleotide kinase | phrog_37456 | unknown function | unknown function | 1 | 859 | 1467 |
| AUV59079.1 | MG770228_p37 | hypothetical protein | phrog_2510 | unknown function | unknown function | 1 | 46488 | 46802 |
| AUV59065.1 | MG770228_p23 | secretion activation protein | phrog_315 | endolysin | lysis | -1 | 32581 | 33207 |
| AUV59094.1 | MG770228_p52 | superinfection exclusion protein | phrog_1510 | superinfection exclusion | moron, auxiliary metabolic gene and host takeover | 1 | 52942 | 53256 |
| AUV59080.1 | MG770228_p38 | hypothetical protein | phrog_2164 | unknown function | unknown function | 1 | 46806 | 47243 |
| AUV59051.1 | MG770228_p9 | hypothetical protein | phrog_7641 | unknown function | unknown function | 1 | 6799 | 7242 |
| AUV59095.1 | MG770228_p53 | hypothetical protein | phrog_1130 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 53331 | 53537 |
| AUV59110.1 | MG770228_p68 | rIIB lysis inhibitor | phrog_2886 | RIIB lysis inhibitor | lysis | 1 | 63259 | 65349 |
| AUV59092.1 | MG770228_p50 | hypothetical protein | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 50734 | 51948 |
| AUV59076.1 | MG770228_p34 | hypothetical protein | phrog_19797 | unknown function | unknown function | 1 | 45069 | 45197 |
| AUV59105.1 | MG770228_p63 | hypothetical protein | phrog_9867 | unknown function | unknown function | 1 | 58741 | 59124 |
| AUV59078.1 | MG770228_p36 | integrase | phrog_4099 | unknown function | unknown function | 1 | 45959 | 46345 |
| AUV59113.1 | MG770228_p71 | DNA helicase | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 66240 | 67559 |
| AUV59112.1 | MG770228_p70 | hypothetical protein | phrog_671 | nucleotide pyrophosphohydrolase | other | 1 | 65859 | 66197 |
| AUV59115.1 | MG770228_p73 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 68104 | 70068 |
| AUV59081.1 | MG770228_p39 | tail fibers protein | phrog_2010 | unknown function | unknown function | 1 | 47236 | 47415 |
| AUV59043.1 | MG770228_p1 | DNA polymerase I | singleton | unknown function | unknown function | 1 | 234 | 521 |
| AUV59109.1 | MG770228_p67 | rIIA lysis inhibitor | phrog_2979 | RIIA lysis inhibitor | lysis | 1 | 60734 | 63259 |
| AUV59069.1 | MG770228_p27 | hypothetical protein | phrog_15324 | tail sheath and receptor binding protein | tail | -1 | 35164 | 39312 |
| AUV59052.1 | MG770228_p10 | hypothetical protein | phrog_322 | unknown function | unknown function | 1 | 8753 | 9124 |
| AUV59084.1 | MG770228_p42 | hypothetical protein | phrog_15592 | unknown function | unknown function | 1 | 47867 | 48082 |
| AUV59093.1 | MG770228_p51 | neck whiskers protein | phrog_2973 | Hoc-like head decoration | head and packaging | 1 | 52033 | 52872 |
| AUV59106.1 | MG770228_p64 | hypothetical protein | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 59117 | 60058 |
| AUV59107.1 | MG770228_p65 | hypothetical protein | phrog_7900 | unknown function | unknown function | 1 | 60156 | 60389 |
| AUV59067.1 | MG770228_p25 | tail length tape-measure protein | phrog_5211 | unknown function | unknown function | -1 | 33442 | 33726 |
| AUV59098.1 | MG770228_p56 | hypothetical protein | phrog_1872 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 54655 | 55011 |
| AUV59111.1 | MG770228_p69 | hypothetical protein | phrog_6377 | unknown function | unknown function | 1 | 65417 | 65812 |
| AUV59064.1 | MG770228_p22 | hypothetical protein | phrog_6197 | Rz-like spanin | lysis | -1 | 32097 | 32600 |
| AUV59048.1 | MG770228_p6 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 4641 | 5396 |
| AUV59047.1 | MG770228_p5 | DNA primase | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 2435 | 4582 |
| AUV59103.1 | MG770228_p61 | hypothetical protein | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | 1 | 57587 | 58093 |
| AUV59070.1 | MG770228_p28 | hypothetical protein | phrog_29955 | appendage | connector | -1 | 39354 | 41024 |
| AUV59046.1 | MG770228_p4 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 1560 | 2438 |
| AUV59075.1 | MG770228_p33 | hypothetical protein | phrog_9160 | unknown function | unknown function | 1 | 44695 | 45060 |
| AUV59074.1 | MG770228_p32 | hypothetical protein | phrog_7213 | unknown function | unknown function | 1 | 44176 | 44484 |
| AUV59066.1 | MG770228_p24 | hypothetical protein | phrog_1356 | holin | lysis | -1 | 33194 | 33457 |
| AUV59068.1 | MG770228_p26 | capsid and scaffold protein | phrog_16150 | tail assembly protein | tail | -1 | 33878 | 35131 |
| AUV59059.1 | MG770228_p17 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 26298 | 26924 |
| AUV59063.1 | MG770228_p21 | portal protein | phrog_1216 | portal protein | head and packaging | -1 | 29797 | 32088 |
| AUV59101.1 | MG770228_p59 | hypothetical protein | phrog_19202 | unknown function | unknown function | 1 | 56257 | 56436 |
| AUV59116.1 | MG770228_p74 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 70055 | 70585 |
| AUV59097.1 | MG770228_p55 | hypothetical protein | phrog_7431 | unknown function | unknown function | 1 | 54429 | 54653 |
| AUV59056.1 | MG770228_p14 | hypothetical protein | phrog_2646 | unknown function | unknown function | -1 | 22192 | 22644 |
| AUV59090.1 | MG770228_p48 | hypothetical protein | phrog_2072 | unknown function | unknown function | 1 | 49422 | 49802 |
| AUV59072.1 | MG770228_p30 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | -1 | 41738 | 43330 |
| AUV59087.1 | MG770228_p45 | antirepressor protein | phrog_7827 | unknown function | unknown function | 1 | 48556 | 48876 |
| AUV59089.1 | MG770228_p47 | hypothetical protein | phrog_13804 | unknown function | unknown function | 1 | 49240 | 49425 |
| AUV59099.1 | MG770228_p57 | hypothetical protein | phrog_23946 | unknown function | unknown function | 1 | 55012 | 55182 |
| AUV59053.1 | MG770228_p11 | hypothetical protein | phrog_872 | unknown function | unknown function | 1 | 9124 | 9609 |
| AUV59091.1 | MG770228_p49 | RNA polymerase | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 49877 | 50686 |
| AUV59082.1 | MG770228_p40 | hypothetical protein | phrog_7648 | unknown function | unknown function | 1 | 47426 | 47584 |
| AUV59062.1 | MG770228_p20 | hypothetical protein | phrog_2346 | unknown function | unknown function | -1 | 29447 | 29794 |
| AUV59100.1 | MG770228_p58 | hypothetical protein | phrog_1297 | ATPase | other | 1 | 55212 | 56270 |
| AUV59071.1 | MG770228_p29 | hypothetical protein | phrog_2125 | virion structural protein | head and packaging | -1 | 41021 | 41731 |
| AUV59049.1 | MG770228_p7 | hypothetical protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 5442 | 6239 |
| AUV59102.1 | MG770228_p60 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 56438 | 57580 |
| AUV59096.1 | MG770228_p54 | SPFH domain protein | phrog_200 | lipoprotein | other | 1 | 53530 | 54366 |
| AUV59114.1 | MG770228_p72 | hypothetical protein | phrog_4881 | unknown function | unknown function | 1 | 67569 | 68096 |
| AUV59077.1 | MG770228_p35 | hypothetical protein | phrog_5020 | unknown function | unknown function | 1 | 45428 | 45754 |
| AUV59083.1 | MG770228_p41 | hypothetical protein | phrog_20789 | unknown function | unknown function | 1 | 47584 | 47793 |
| AUV59086.1 | MG770228_p44 | hypothetical protein | phrog_35919 | unknown function | unknown function | 1 | 48380 | 48556 |
| AUV59044.1 | MG770228_p2 | hypothetical protein | phrog_5974 | unknown function | unknown function | 1 | 518 | 856 |
| AUV59061.1 | MG770228_p19 | tape measure protein | phrog_2120 | tail length tape measure protein | tail | -1 | 28204 | 29421 |
| AUV59088.1 | MG770228_p46 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 48879 | 49247 |
| AUV59073.1 | MG770228_p31 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 43323 | 44015 |