| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG775260 |
Definition |
Pseudomonas phage Littlefix, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae. |
DB of origin |
NUCCORE |
Length |
74895 |
Host Name |
Pseudomonas |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
95 |
%GC |
48.73 |
Number of singletons |
44 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUV61824.1 | MG775260_p9 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5997 | 6593 |
| AUV61818.1 | MG775260_p3 | hypothetical protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 2159 | 2920 |
| AUV61868.1 | MG775260_p53 | hypothetical protein | phrog_335 | phosphatase | other | 1 | 41294 | 41728 |
| AUV61834.1 | MG775260_p19 | hypothetical protein | phrog_2346 | unknown function | unknown function | -1 | 25768 | 26103 |
| AUV61898.1 | MG775260_p83 | hypothetical protein | singleton | unknown function | unknown function | 1 | 62720 | 63049 |
| AUV61904.1 | MG775260_p89 | hypothetical protein | phrog_4062 | unknown function | unknown function | -1 | 68932 | 69648 |
| AUV61839.1 | MG775260_p24 | hypothetical protein | phrog_2125 | virion structural protein | head and packaging | -1 | 29377 | 30102 |
| AUV61827.1 | MG775260_p12 | hypothetical protein | singleton | unknown function | unknown function | -1 | 17730 | 18971 |
| AUV61878.1 | MG775260_p63 | alpha-galactosidase | phrog_2979 | RIIA lysis inhibitor | lysis | 1 | 46040 | 48550 |
| AUV61909.1 | MG775260_p94 | hypothetical protein | phrog_7810 | unknown function | unknown function | 1 | 72870 | 73070 |
| AUV61875.1 | MG775260_p60 | DNA-directed RNA polymerase | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 44370 | 45620 |
| AUV61821.1 | MG775260_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4045 | 4524 |
| AUV61894.1 | MG775260_p79 | hypothetical protein | singleton | unknown function | unknown function | 1 | 61373 | 61522 |
| AUV61864.1 | MG775260_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40243 | 40500 |
| AUV61893.1 | MG775260_p78 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 58707 | 61334 |
| AUV61887.1 | MG775260_p72 | hypothetical protein | phrog_18415 | unknown function | unknown function | 1 | 53966 | 54151 |
| AUV61829.1 | MG775260_p14 | hypothetical protein | phrog_2220 | unknown function | unknown function | -1 | 19509 | 21809 |
| AUV61832.1 | MG775260_p17 | hypothetical protein | phrog_1357 | major head protein | head and packaging | -1 | 23386 | 24576 |
| AUV61874.1 | MG775260_p59 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 43981 | 44355 |
| AUV61896.1 | MG775260_p81 | hypothetical protein | phrog_6858 | unknown function | unknown function | 1 | 61979 | 62224 |
| AUV61822.1 | MG775260_p7 | hypothetical protein | phrog_7212 | unknown function | unknown function | 1 | 4582 | 5112 |
| AUV61837.1 | MG775260_p22 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28788 | 28946 |
| AUV61846.1 | MG775260_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33926 | 34216 |
| AUV61908.1 | MG775260_p93 | hypothetical protein | phrog_2452 | unknown function | unknown function | 1 | 72070 | 72873 |
| AUV61895.1 | MG775260_p80 | deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 61526 | 61969 |
| AUV61902.1 | MG775260_p87 | hypothetical protein | phrog_3108 | unknown function | unknown function | -1 | 64273 | 64770 |
| AUV61823.1 | MG775260_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5644 | 5760 |
| AUV61885.1 | MG775260_p70 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53259 | 53630 |
| AUV61892.1 | MG775260_p77 | hypothetical protein | singleton | unknown function | unknown function | 1 | 58192 | 58707 |
| AUV61851.1 | MG775260_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35943 | 36263 |
| AUV61819.1 | MG775260_p4 | hypothetical protein | phrog_3934 | unknown function | unknown function | 1 | 2930 | 3478 |
| AUV61816.1 | MG775260_p1 | DNA primase | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 10 | 1335 |
| AUV61830.1 | MG775260_p15 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | -1 | 21865 | 22614 |
| AUV61833.1 | MG775260_p18 | hypothetical protein | phrog_2120 | tail length tape measure protein | tail | -1 | 24592 | 25761 |
| AUV61848.1 | MG775260_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34764 | 34976 |
| AUV61859.1 | MG775260_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38604 | 38831 |
| AUV61871.1 | MG775260_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42235 | 42495 |
| AUV61883.1 | MG775260_p68 | hypothetical protein | phrog_1872 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 51215 | 51565 |
| AUV61879.1 | MG775260_p64 | hypothetical protein | phrog_2886 | RIIB lysis inhibitor | lysis | 1 | 48550 | 50439 |
| AUV61843.1 | MG775260_p28 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32895 | 33170 |
| AUV61820.1 | MG775260_p5 | hypothetical protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 3478 | 4044 |
| AUV61888.1 | MG775260_p73 | hypothetical protein | phrog_1297 | ATPase | other | 1 | 54163 | 55230 |
| AUV61891.1 | MG775260_p76 | DNA helicase | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 57032 | 58195 |
| AUV61849.1 | MG775260_p34 | hypothetical protein | phrog_28861 | unknown function | unknown function | 1 | 34986 | 35267 |
| AUV61852.1 | MG775260_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36267 | 36560 |
| AUV61857.1 | MG775260_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37820 | 38233 |
| AUV61867.1 | MG775260_p52 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41040 | 41297 |
| AUV61840.1 | MG775260_p25 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | -1 | 30105 | 31745 |
| AUV61869.1 | MG775260_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41725 | 42027 |
| AUV61905.1 | MG775260_p90 | hypothetical protein | phrog_2427 | unknown function | unknown function | -1 | 69648 | 69935 |
| AUV61855.1 | MG775260_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37329 | 37532 |
| AUV61817.1 | MG775260_p2 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 1387 | 2106 |
| AUV61877.1 | MG775260_p62 | hypothetical protein | phrog_7900 | unknown function | unknown function | 1 | 45802 | 46011 |
| AUV61900.1 | MG775260_p85 | hypothetical protein | singleton | unknown function | unknown function | 1 | 63505 | 63783 |
| AUV61903.1 | MG775260_p88 | hypothetical protein | phrog_20500 | tail protein | tail | -1 | 64808 | 68905 |
| AUV61889.1 | MG775260_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 55227 | 55721 |
| AUV61880.1 | MG775260_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50441 | 50713 |
| AUV61881.1 | MG775260_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50719 | 50904 |
| AUV61899.1 | MG775260_p84 | hypothetical protein | phrog_6854 | holin | lysis | 1 | 63121 | 63447 |
| AUV61873.1 | MG775260_p58 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43415 | 43984 |
| AUV61872.1 | MG775260_p57 | RNA polymerase | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 42495 | 43418 |
| AUV61907.1 | MG775260_p92 | hypothetical protein | phrog_3360 | unknown function | unknown function | 1 | 71673 | 72089 |
| AUV61860.1 | MG775260_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38791 | 39051 |
| AUV61845.1 | MG775260_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33346 | 33567 |
| AUV61886.1 | MG775260_p71 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53640 | 53840 |
| AUV61853.1 | MG775260_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36607 | 36771 |
| AUV61897.1 | MG775260_p82 | hypothetical protein | singleton | unknown function | unknown function | 1 | 62473 | 62733 |
| AUV61858.1 | MG775260_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38328 | 38600 |
| AUV61890.1 | MG775260_p75 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 55721 | 56947 |
| AUV61844.1 | MG775260_p29 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33167 | 33349 |
| AUV61884.1 | MG775260_p69 | hypothetical protein | phrog_10440 | unknown function | unknown function | 1 | 51705 | 53177 |
| AUV61876.1 | MG775260_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45607 | 45723 |
| AUV61882.1 | MG775260_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50910 | 51215 |
| AUV61850.1 | MG775260_p35 | hypothetical protein | phrog_24669 | unknown function | unknown function | 1 | 35494 | 35931 |
| AUV61862.1 | MG775260_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39480 | 39956 |
| AUV61841.1 | MG775260_p26 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31742 | 32185 |
| AUV61831.1 | MG775260_p16 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 22618 | 23328 |
| AUV61910.1 | MG775260_p95 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 73067 | 74062 |
| AUV61828.1 | MG775260_p13 | hypothetical protein | phrog_2646 | unknown function | unknown function | -1 | 19016 | 19534 |
| AUV61825.1 | MG775260_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6611 | 6916 |
| AUV61861.1 | MG775260_p46 | hypothetical protein | phrog_6271 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 39120 | 39425 |
| AUV61835.1 | MG775260_p20 | hypothetical protein | phrog_1216 | portal protein | head and packaging | -1 | 26172 | 28322 |
| AUV61865.1 | MG775260_p50 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40493 | 40786 |
| AUV61854.1 | MG775260_p39 | hypothetical protein | phrog_2072 | unknown function | unknown function | 1 | 36949 | 37329 |
| AUV61856.1 | MG775260_p41 | hypothetical protein | phrog_14729 | unknown function | unknown function | 1 | 37535 | 37816 |
| AUV61863.1 | MG775260_p48 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39953 | 40246 |
| AUV61906.1 | MG775260_p91 | tail fiber protein | phrog_496 | tail fiber protein | tail | -1 | 69935 | 71221 |
| AUV61836.1 | MG775260_p21 | deoxyuridine 5'-triphosphate nucleotidohydrolase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 28357 | 28791 |
| AUV61826.1 | MG775260_p11 | RNA polymerase | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 7603 | 17712 |
| AUV61870.1 | MG775260_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41978 | 42238 |
| AUV61866.1 | MG775260_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40783 | 41043 |
| AUV61842.1 | MG775260_p27 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 32182 | 32898 |
| AUV61847.1 | MG775260_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34268 | 34459 |
| AUV61838.1 | MG775260_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28939 | 29235 |
| AUV61901.1 | MG775260_p86 | hypothetical protein | phrog_312 | Rz-like spanin | lysis | -1 | 63770 | 64273 |