Genomic map of Lactobacillus phage PM411 (MG788324)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG788324
Definition
Lactobacillus phage PM411, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
69649
Host Name
Lactobacillus plantarum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
91
%GC
42.31
Number of singletons
16
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AVH85747.1 MG788324_p4 transcriptional regulator phrog_3736 unknown function unknown function -1 2665 3612
AVH85791.1 MG788324_p48 homing endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 28184 28522
AVH85763.1 MG788324_p20 copper-translocating P-type ATPase phrog_1337 DNA binding protein DNA, RNA and nucleotide metabolism 1 14513 14722
AVH85819.1 MG788324_p76 hypothetical protein phrog_25 head closure Hc1 connector 1 52365 52712
AVH85793.1 MG788324_p50 phosphopantetheine adenylyltransferase phrog_26486 unknown function unknown function 1 28782 29024
AVH85762.1 MG788324_p19 hypothetical protein phrog_8 transcriptional regulator transcription regulation -1 13817 14191
AVH85814.1 MG788324_p71 NAD(P) transhydrogenase subunit beta phrog_1129 holin lysis 1 48207 48491
AVH85758.1 MG788324_p15 glutathione reductase phrog_24611 unknown function unknown function -1 11997 12254
AVH85775.1 MG788324_p32 hypothetical protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 19301 19924
AVH85834.1 MG788324_p91 hypothetical protein phrog_13404 holin lysis 1 68915 69277
AVH85779.1 MG788324_p36 acetyl-coenzyme A synthetase singleton unknown function unknown function 1 22640 22837
AVH85778.1 MG788324_p35 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 22318 22659
AVH85749.1 MG788324_p6 fumarate reductase flavoprotein subunit singleton unknown function unknown function 1 4573 7011
AVH85829.1 MG788324_p86 hypothetical protein phrog_12210 unknown function unknown function 1 66467 66628
AVH85765.1 MG788324_p22 galactose-1-phosphate uridylyltransferase phrog_668 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 14929 15201
AVH85825.1 MG788324_p82 hypothetical protein phrog_202 distal tail protein Dit tail 1 59720 61495
AVH85832.1 MG788324_p89 lysin phrog_291 endolysin lysis 1 67606 68634
AVH85802.1 MG788324_p59 hypothetical protein phrog_78 tail terminator connector 1 35412 35834
AVH85744.1 MG788324_p1 hypothetical protein singleton unknown function unknown function 1 248 1417
AVH85782.1 MG788324_p39 hypothetical protein singleton unknown function unknown function 1 23306 23431
AVH85788.1 MG788324_p45 LSU ribosomal protein L3p singleton unknown function unknown function 1 26571 27293
AVH85818.1 MG788324_p75 NAD(P) transhydrogenase subunit beta phrog_40 head-tail adaptor Ad1 connector 1 52061 52378
AVH85800.1 MG788324_p57 FkbH phrog_25 head closure Hc1 connector 1 34622 35011
AVH85764.1 MG788324_p21 hypothetical protein phrog_5118 unknown function unknown function 1 14726 14929
AVH85824.1 MG788324_p81 tail length tape-measure protein phrog_167 tail length tape measure protein tail 1 54892 59643
AVH85751.1 MG788324_p8 purine trans deoxyribosylase phrog_7995 nucleoside deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 7730 8170
AVH85831.1 MG788324_p88 alanyl-tRNA synthetase phrog_5499 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 67124 67594
AVH85777.1 MG788324_p34 hypothetical protein phrog_1313 DNA helicase DNA, RNA and nucleotide metabolism 1 20786 22060
AVH85771.1 MG788324_p28 pyruvate oxidase singleton unknown function unknown function 1 16579 16698
AVH85787.1 MG788324_p44 hypothetical protein singleton unknown function unknown function 1 25501 26490
AVH85795.1 MG788324_p52 terminase large subunit phrog_9 terminase large subunit head and packaging 1 29416 31098
AVH85801.1 MG788324_p58 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 35008 35415
AVH85745.1 MG788324_p2 nisin resistance protein singleton unknown function unknown function -1 1508 2479
AVH85807.1 MG788324_p64 tail length tape-measure protein phrog_1293 tail length tape measure protein tail 1 37351 41895
AVH85768.1 MG788324_p25 HlyB/MsbA family ABC transporter phrog_27824 ABC transporter moron, auxiliary metabolic gene and host takeover 1 15944 16129
AVH85757.1 MG788324_p14 alpha-glucosidase phrog_6929 universal stress protein other -1 11466 11897
AVH85822.1 MG788324_p79 major tail protein phrog_88 major tail protein tail 1 53516 54169
AVH85789.1 MG788324_p46 hypothetical protein phrog_10213 unknown function unknown function 1 27508 27918
AVH85773.1 MG788324_p30 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 17245 18585
AVH85794.1 MG788324_p51 LSU ribosomal protein L18p phrog_2343 terminase small subunit head and packaging 1 29132 29419
AVH85790.1 MG788324_p47 hypothetical protein phrog_23649 unknown function unknown function 1 27985 28200
AVH85812.1 MG788324_p69 rod shape-determining protein phrog_11342 unknown function unknown function 1 47627 48010
AVH85786.1 MG788324_p43 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 24972 25385
AVH85808.1 MG788324_p65 internalin phrog_33 distal tail protein Dit tail 1 41899 42720
AVH85817.1 MG788324_p74 hypothetical protein phrog_2263 major head protein head and packaging 1 50066 51916
AVH85827.1 MG788324_p84 hypothetical protein phrog_7660 tail fiber protein tail 1 63988 66228
AVH85809.1 MG788324_p66 hypothetical protein phrog_1330 tail protein tail 1 42740 46666
AVH85811.1 MG788324_p68 hypothetical protein phrog_19261 unknown function unknown function 1 47176 47610
AVH85761.1 MG788324_p18 hypothetical protein phrog_87 metallo-protease other -1 13376 13807
AVH85770.1 MG788324_p27 hypothetical protein phrog_22814 unknown function unknown function 1 16274 16591
AVH85799.1 MG788324_p56 hypothetical protein phrog_749 unknown function unknown function 1 34336 34641
AVH85826.1 MG788324_p83 hypothetical protein phrog_4798 tail protein tail 1 61559 63970
AVH85756.1 MG788324_p13 hypothetical protein phrog_18781 unknown function unknown function -1 10686 11354
AVH85766.1 MG788324_p23 hemolysin activation/secretion protein phrog_15098 unknown function unknown function 1 15339 15788
AVH85792.1 MG788324_p49 diaminopimelate decarboxylase phrog_17806 unknown function unknown function 1 28522 28764
AVH85755.1 MG788324_p12 hypothetical protein phrog_1 integrase integration and excision -1 9359 10516
AVH85753.1 MG788324_p10 3-oxoacyl-[acyl-carrier protein] reductase singleton unknown function unknown function 1 8515 8982
AVH85774.1 MG788324_p31 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 18657 19298
AVH85759.1 MG788324_p16 alpha-amylase phrog_15564 unknown function unknown function -1 12378 12554
AVH85816.1 MG788324_p73 portal protein singleton unknown function unknown function 1 49669 50103
AVH85821.1 MG788324_p78 tail component phrog_1217 tail protein tail 1 53119 53499
AVH85803.1 MG788324_p60 major tail protein phrog_88 major tail protein tail 1 35849 36454
AVH85760.1 MG788324_p17 hypothetical protein singleton unknown function unknown function -1 12724 13284
AVH85820.1 MG788324_p77 tail protein phrog_5 tail completion or Neck1 protein connector 1 52715 53119
AVH85823.1 MG788324_p80 hypothetical protein phrog_1346 tail protein tail 1 54245 54619
AVH85833.1 MG788324_p90 hypothetical protein phrog_689 holin lysis 1 68634 68903
AVH85781.1 MG788324_p38 ATPase phrog_32922 unknown function unknown function 1 23145 23303
AVH85767.1 MG788324_p24 glycyl-tRNA synthetase beta chain phrog_26235 unknown function unknown function 1 15775 15951
AVH85785.1 MG788324_p42 penicillin-binding protein 2 phrog_27493 unknown function unknown function 1 24649 24960
AVH85784.1 MG788324_p41 Rhs family protein phrog_419 unknown function unknown function 1 23951 24409
AVH85797.1 MG788324_p54 Clp protease-like protein phrog_94 head maturation protease head and packaging 1 32246 32998
AVH85769.1 MG788324_p26 L-proline glycine betaine ABC transport system permease protein phrog_22687 unknown function unknown function 1 16101 16271
AVH85746.1 MG788324_p3 membrane protein singleton unknown function unknown function -1 2528 2668
AVH85780.1 MG788324_p37 hypothetical protein phrog_154 replication initiation protein DNA, RNA and nucleotide metabolism 1 22830 23141
AVH85748.1 MG788324_p5 fumarate reductase flavoprotein subunit precursor singleton unknown function unknown function 1 3956 4570
AVH85750.1 MG788324_p7 hypothetical protein singleton unknown function unknown function 1 7099 7659
AVH85776.1 MG788324_p33 replication protein phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 19995 20789
AVH85815.1 MG788324_p72 hypothetical protein phrog_291 endolysin lysis 1 48491 49423
AVH85813.1 MG788324_p70 DNA polymerase III alpha subunit phrog_6664 unknown function unknown function 1 48013 48207
AVH85804.1 MG788324_p61 lipoprotein releasing system transmembrane protein phrog_215 structural protein with Ig domain head and packaging 1 36429 36701
AVH85752.1 MG788324_p9 minor tail protein singleton unknown function unknown function 1 8169 8333
AVH85805.1 MG788324_p62 ATP-dependent DNA helicase phrog_187 head-tail adaptor connector 1 36773 37087
AVH85828.1 MG788324_p85 hypothetical protein phrog_11075 unknown function unknown function 1 66221 66463
AVH85783.1 MG788324_p40 tail protein phrog_98 unknown function unknown function 1 23664 23954
AVH85772.1 MG788324_p29 monooxygenase phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 16695 17174
AVH85796.1 MG788324_p53 portal protein phrog_12 portal protein head and packaging 1 31117 32259
AVH85798.1 MG788324_p55 major capsid protein phrog_10 major head protein head and packaging 1 33019 34197
AVH85830.1 MG788324_p87 hypothetical protein phrog_4440 tail fiber protein tail 1 66612 67118
AVH85806.1 MG788324_p63 Kup system potassium uptake protein phrog_25839 unknown function unknown function 1 37111 37332
AVH85810.1 MG788324_p67 hypothetical protein phrog_1401 unknown function unknown function 1 46689 47174
AVH85754.1 MG788324_p11 NTPase singleton unknown function unknown function 1 8957 9187