Genomic map of Mycobacterium phage SWU2 (MG793454)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG793454
Definition
Mycobacterium phage SWU2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
50013
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
76
%GC
62.66
Number of singletons
4
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUV61960.1 MG793454_p1 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 331 702
AUV62023.1 MG793454_p64 DNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 43467 44282
AUV61986.1 MG793454_p27 minor tail protein phrog_106 minor tail protein tail 1 20216 22198
AUV62027.1 MG793454_p68 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 45245 46039
AUV61974.1 MG793454_p15 capsid and scaffold protein phrog_233 head scaffolding protein head and packaging 1 11787 12290
AUV61964.1 MG793454_p5 hypothetical protein phrog_382 minor tail protein with lysin activity tail 1 2344 3564
AUV62024.1 MG793454_p65 hypothetical protein phrog_520 unknown function unknown function -1 44320 44679
AUV62011.1 MG793454_p52 hypothetical protein phrog_2387 nucleotide kinase other -1 38195 38587
AUV61999.1 MG793454_p40 hypothetical protein phrog_383 unknown function unknown function -1 30122 30484
AUV61967.1 MG793454_p8 hypothetical protein phrog_1087 unknown function unknown function 1 5309 5446
AUV61975.1 MG793454_p16 hypothetical protein phrog_10 major head protein head and packaging 1 12324 13301
AUV61982.1 MG793454_p23 tail fibers protein phrog_117 major tail protein tail 1 15292 15873
AUV62022.1 MG793454_p63 hypothetical protein phrog_2068 phosphoribosyl transferase other -1 42784 43446
AUV61992.1 MG793454_p33 integrase phrog_95 integrase integration and excision -1 26672 28138
AUV61984.1 MG793454_p25 hypothetical protein phrog_3656 tail assembly chaperone tail 1 16544 16834
AUV62013.1 MG793454_p54 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38852 39364
AUV61961.1 MG793454_p2 hypothetical protein phrog_226 minor tail protein tail 1 742 1176
AUV61973.1 MG793454_p14 hypothetical protein phrog_193 head maturation protease head and packaging 1 10711 11736
AUV62025.1 MG793454_p66 hypothetical protein phrog_3236 unknown function unknown function -1 44676 45014
AUV61968.1 MG793454_p9 endolysin phrog_317 endolysin lysis 1 5676 7025
AUV62018.1 MG793454_p59 hypothetical protein phrog_289 GTP-binding domain other -1 41753 42202
AUV62034.1 MG793454_p75 hypothetical protein phrog_1617 unknown function unknown function -1 47889 48767
AUV62021.1 MG793454_p62 hypothetical protein phrog_397 unknown function unknown function -1 42515 42751
AUV61998.1 MG793454_p39 hypothetical protein phrog_31400 unknown function unknown function -1 29940 30125
AUV62035.1 MG793454_p76 hypothetical protein phrog_16818 unknown function unknown function -1 48810 49064
AUV62009.1 MG793454_p50 hypothetical protein phrog_221 metallo-phosphoesterase other -1 36961 37731
AUV61976.1 MG793454_p17 hypothetical protein phrog_748 head-tail connector protein connector 1 13365 13553
AUV62010.1 MG793454_p51 hypothetical protein phrog_1167 phosphofructokinase other -1 37728 38198
AUV62029.1 MG793454_p70 hypothetical protein singleton unknown function unknown function -1 46316 46951
AUV61971.1 MG793454_p12 terminase large subunit phrog_9 terminase large subunit head and packaging 1 7566 9260
AUV61995.1 MG793454_p36 hypothetical protein phrog_9328 unknown function unknown function -1 28955 29245
AUV61969.1 MG793454_p10 hypothetical protein phrog_526 holin lysis 1 7022 7441
AUV62004.1 MG793454_p45 hypothetical protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 32953 33168
AUV62003.1 MG793454_p44 hypothetical protein phrog_18021 unknown function unknown function -1 32738 32956
AUV62017.1 MG793454_p58 hypothetical protein phrog_789 esterase/lipase other -1 40935 41747
AUV61977.1 MG793454_p18 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 13561 13935
AUV61988.1 MG793454_p29 hypothetical protein phrog_352 minor tail protein tail 1 24012 24476
AUV61985.1 MG793454_p26 tail length tape-measure protein phrog_305 tail length tape measure protein tail 1 16834 20211
AUV61997.1 MG793454_p38 hypothetical protein phrog_2046 unknown function unknown function -1 29755 29943
AUV61978.1 MG793454_p19 hypothetical protein phrog_830 head-tail connector protein connector 1 13932 14102
AUV61980.1 MG793454_p21 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 14484 14828
AUV62012.1 MG793454_p53 hypothetical protein phrog_5618 unknown function unknown function -1 38580 38855
AUV61966.1 MG793454_p7 hypothetical protein phrog_553 minor tail protein tail 1 4637 5299
AUV61965.1 MG793454_p6 tail fiber protein phrog_819 tail protein tail 1 3591 4637
AUV61983.1 MG793454_p24 hypothetical protein phrog_330 tail assembly chaperone tail 1 16044 16406
AUV61970.1 MG793454_p11 hypothetical protein singleton unknown function unknown function -1 7446 7613
AUV61972.1 MG793454_p13 portal (connector) protein phrog_104 portal protein head and packaging 1 9257 10714
AUV62032.1 MG793454_p73 hypothetical protein phrog_828 unknown function unknown function -1 47361 47564
AUV62005.1 MG793454_p46 hypothetical protein phrog_690 unknown function unknown function -1 33203 33418
AUV61979.1 MG793454_p20 hypothetical protein phrog_320 head closure Hc1 connector 1 14099 14482
AUV61963.1 MG793454_p4 hypothetical protein phrog_819 tail protein tail 1 1566 2318
AUV62026.1 MG793454_p67 hypothetical protein phrog_642 unknown function unknown function -1 45011 45241
AUV61981.1 MG793454_p22 hypothetical protein phrog_123 tail terminator connector 1 14837 15280
AUV62015.1 MG793454_p56 hypothetical protein phrog_363 DNA methyltransferase other -1 39712 40365
AUV62031.1 MG793454_p72 hypothetical protein phrog_15203 unknown function unknown function -1 47211 47324
AUV61991.1 MG793454_p32 hypothetical protein phrog_2235 minor tail protein tail 1 26300 26623
AUV62006.1 MG793454_p47 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 33484 34038
AUV62014.1 MG793454_p55 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 39315 39719
AUV61989.1 MG793454_p30 hypothetical protein phrog_404 minor tail protein tail 1 24505 24837
AUV61994.1 MG793454_p35 hypothetical protein phrog_542 unknown function unknown function -1 28797 28958
AUV62028.1 MG793454_p69 hypothetical protein phrog_4421 unknown function unknown function -1 45993 46283
AUV61993.1 MG793454_p34 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 28291 28797
AUV62001.1 MG793454_p42 hypothetical protein phrog_7968 unknown function unknown function -1 30734 30880
AUV62016.1 MG793454_p57 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 40409 40837
AUV62008.1 MG793454_p49 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 36062 36964
AUV61962.1 MG793454_p3 minor tail subunit phrog_1126 unknown function unknown function 1 1253 1576
AUV62007.1 MG793454_p48 ribonucleotide reductase of class II phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 34023 36065
AUV61996.1 MG793454_p37 hypothetical protein phrog_980 unknown function unknown function -1 29364 29657
AUV62033.1 MG793454_p74 hypothetical protein phrog_2246 unknown function unknown function -1 47567 47794
AUV62000.1 MG793454_p41 hypothetical protein phrog_2019 unknown function unknown function -1 30474 30737
AUV62019.1 MG793454_p60 hypothetical protein singleton unknown function unknown function -1 42199 42348
AUV62020.1 MG793454_p61 hypothetical protein singleton unknown function unknown function -1 42345 42518
AUV62002.1 MG793454_p43 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 30889 32727
AUV61990.1 MG793454_p31 hypothetical protein phrog_2683 minor tail protein tail 1 24834 26297
AUV61987.1 MG793454_p28 minor tail protein phrog_110 minor tail protein tail 1 22195 23997
AUV62030.1 MG793454_p71 hypothetical protein phrog_1173 unknown function unknown function -1 46954 47121