| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG812487 |
Definition |
Gordonia phage Brandonk123, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Vividuovirus; Gordonia virus Brandonk123. |
DB of origin |
NUCCORE |
Length |
58842 |
Host Name |
Gordonia terrae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
89 |
%GC |
67.28 |
Number of singletons |
7 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUX81840.1 | MG812487_p3 | hypothetical protein | phrog_34768 | unknown function | unknown function | 1 | 2147 | 2407 |
| AUX81896.1 | MG812487_p59 | hypothetical protein | phrog_6055 | unknown function | unknown function | 1 | 46650 | 47153 |
| AUX81857.1 | MG812487_p20 | hypothetical protein | phrog_23855 | unknown function | unknown function | 1 | 14411 | 14584 |
| AUX81923.1 | MG812487_p87 | hypothetical protein | phrog_17380 | unknown function | unknown function | 1 | 57369 | 57635 |
| AUX81867.1 | MG812487_p30 | hypothetical protein | phrog_901 | unknown function | unknown function | 1 | 22839 | 23246 |
| AUX81849.1 | MG812487_p12 | hypothetical protein | phrog_4980 | superinfection exclusion | moron, auxiliary metabolic gene and host takeover | 1 | 6057 | 6596 |
| AUX81850.1 | MG812487_p13 | hypothetical protein | phrog_23472 | unknown function | unknown function | 1 | 6598 | 6765 |
| AUX81847.1 | MG812487_p10 | hypothetical protein | phrog_22356 | unknown function | unknown function | 1 | 4923 | 5318 |
| AUX81869.1 | MG812487_p32 | hypothetical protein | phrog_14331 | unknown function | unknown function | 1 | 23701 | 24312 |
| AUX81907.1 | MG812487_p71 | hypothetical protein | phrog_33533 | unknown function | unknown function | 1 | 51072 | 51239 |
| AUX81899.1 | MG812487_p63 | hypothetical protein | phrog_33110 | unknown function | unknown function | 1 | 48116 | 48262 |
| AUX81887.1 | MG812487_p50 | exonuclease | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 41790 | 42914 |
| AUX81877.1 | MG812487_p40 | hypothetical protein | phrog_4137 | unknown function | unknown function | 1 | 35667 | 35945 |
| AUX81897.1 | MG812487_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47557 | 47937 |
| AUX81902.1 | MG812487_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 49721 | 49921 |
| AUX81903.1 | MG812487_p67 | hypothetical protein | phrog_22035 | unknown function | unknown function | 1 | 49918 | 50202 |
| AUX81898.1 | MG812487_p62 | hypothetical protein | phrog_19496 | unknown function | unknown function | 1 | 47934 | 48119 |
| AUX81890.1 | MG812487_p53 | ssDNA binding protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 43467 | 44465 |
| AUX81844.1 | MG812487_p7 | hypothetical protein | phrog_33939 | unknown function | unknown function | 1 | 3107 | 4216 |
| AUX81886.1 | MG812487_p49 | hypothetical protein | phrog_5984 | unknown function | unknown function | 1 | 41539 | 41793 |
| AUX81882.1 | MG812487_p45 | membrane protein | phrog_1298 | minor tail protein | tail | 1 | 39162 | 39845 |
| AUX81889.1 | MG812487_p52 | hypothetical protein | phrog_27530 | unknown function | unknown function | 1 | 43115 | 43363 |
| AUX81873.1 | MG812487_p36 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 30817 | 32580 |
| AUX81859.1 | MG812487_p22 | major capsid protein | phrog_777 | major head protein | head and packaging | 1 | 14830 | 16737 |
| AUX81874.1 | MG812487_p37 | HNH endonuclease | phrog_1492 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 32592 | 33065 |
| AUX81894.1 | MG812487_p57 | hypothetical protein | phrog_27757 | unknown function | unknown function | 1 | 45308 | 45613 |
| AUX81843.1 | MG812487_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2970 | 3110 |
| AUX81884.1 | MG812487_p47 | lysin B | phrog_102 | endolysin | lysis | 1 | 40277 | 41011 |
| AUX81855.1 | MG812487_p18 | hypothetical protein | phrog_17748 | unknown function | unknown function | 1 | 11539 | 11757 |
| AUX81863.1 | MG812487_p26 | hypothetical protein | phrog_35351 | unknown function | unknown function | 1 | 19123 | 19362 |
| AUX81921.1 | MG812487_p85 | hypothetical protein | singleton | unknown function | unknown function | 1 | 56678 | 56992 |
| AUX81865.1 | MG812487_p28 | head-to-tail connector complex protein | phrog_783 | head-tail adaptor | connector | 1 | 21524 | 22297 |
| AUX81906.1 | MG812487_p70 | hypothetical protein | phrog_31047 | unknown function | unknown function | 1 | 50647 | 51060 |
| AUX81858.1 | MG812487_p21 | hypothetical protein | phrog_14225 | unknown function | unknown function | 1 | 14574 | 14720 |
| AUX81862.1 | MG812487_p25 | major tail protein | phrog_792 | major tail protein | tail | 1 | 18299 | 18994 |
| AUX81864.1 | MG812487_p27 | hydrolase | phrog_16653 | hydrolase | other | 1 | 19364 | 21058 |
| AUX81911.1 | MG812487_p75 | hypothetical protein | phrog_26185 | unknown function | unknown function | 1 | 52636 | 53751 |
| AUX81878.1 | MG812487_p41 | hypothetical protein | phrog_23538 | unknown function | unknown function | 1 | 35942 | 36127 |
| AUX81914.1 | MG812487_p78 | hypothetical protein | phrog_13001 | unknown function | unknown function | 1 | 54847 | 55110 |
| AUX81846.1 | MG812487_p9 | hypothetical protein | phrog_21387 | unknown function | unknown function | 1 | 4684 | 4857 |
| AUX81870.1 | MG812487_p33 | hypothetical protein | phrog_13927 | unknown function | unknown function | 1 | 24321 | 24929 |
| AUX81839.1 | MG812487_p2 | terminase | phrog_38 | terminase large subunit | head and packaging | 1 | 514 | 2106 |
| AUX81922.1 | MG812487_p86 | hypothetical protein | phrog_17681 | unknown function | unknown function | 1 | 56989 | 57372 |
| AUX81853.1 | MG812487_p16 | hypothetical protein | phrog_14528 | unknown function | unknown function | 1 | 8781 | 9254 |
| AUX81895.1 | MG812487_p58 | HTH DNA binding protein | phrog_27344 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 45610 | 46653 |
| AUX81875.1 | MG812487_p38 | hypothetical protein | phrog_352 | minor tail protein | tail | 1 | 33185 | 33742 |
| AUX81848.1 | MG812487_p11 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 5315 | 5971 |
| AUX81913.1 | MG812487_p77 | hypothetical protein | phrog_17794 | unknown function | unknown function | 1 | 54387 | 54854 |
| AUX81910.1 | MG812487_p74 | hypothetical protein | phrog_33917 | unknown function | unknown function | 1 | 52277 | 52639 |
| AUX81860.1 | MG812487_p23 | hypothetical protein | phrog_779 | unknown function | unknown function | 1 | 16835 | 17665 |
| AUX81905.1 | MG812487_p69 | hypothetical protein | phrog_23432 | unknown function | unknown function | 1 | 50380 | 50568 |
| AUX81925.1 | MG812487_p89 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 57956 | 58654 |
| AUX81876.1 | MG812487_p39 | minor tail protein | phrog_2689 | minor tail protein | tail | 1 | 33739 | 35661 |
| AUX81845.1 | MG812487_p8 | hypothetical protein | phrog_21555 | unknown function | unknown function | 1 | 4213 | 4656 |
| AUX81908.1 | MG812487_p72 | hypothetical protein | phrog_32335 | unknown function | unknown function | 1 | 51352 | 51645 |
| AUX81838.1 | MG812487_p1 | hypothetical protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 1 | 510 |
| AUX81879.1 | MG812487_p42 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 36243 | 36713 |
| AUX81852.1 | MG812487_p15 | portal protein | phrog_776 | portal protein | head and packaging | 1 | 7162 | 8784 |
| AUX81912.1 | MG812487_p76 | hypothetical protein | phrog_21901 | unknown function | unknown function | 1 | 53753 | 54052 |
| AUX81841.1 | MG812487_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2441 | 2713 |
| AUX81891.1 | MG812487_p54 | hypothetical protein | phrog_14395 | unknown function | unknown function | 1 | 44483 | 44920 |
| AUX81856.1 | MG812487_p19 | capsid maturation protease | phrog_18402 | head maturation protease | head and packaging | 1 | 11791 | 14409 |
| AUX81901.1 | MG812487_p65 | hypothetical protein | phrog_21374 | unknown function | unknown function | 1 | 48648 | 49724 |
| AUX81916.1 | MG812487_p80 | hypothetical protein | phrog_35348 | unknown function | unknown function | 1 | 55309 | 55578 |
| AUX81871.1 | MG812487_p34 | tape measure protein | phrog_6090 | tail length tape measure protein | tail | 1 | 25024 | 29847 |
| AUX81919.1 | MG812487_p83 | hypothetical protein | phrog_26813 | unknown function | unknown function | 1 | 56028 | 56378 |
| AUX81854.1 | MG812487_p17 | hypothetical protein | phrog_18477 | head morphogenesis | head and packaging | 1 | 9242 | 11542 |
| AUX81866.1 | MG812487_p29 | hypothetical protein | phrog_810 | unknown function | unknown function | 1 | 22294 | 22842 |
| AUX81892.1 | MG812487_p55 | hypothetical protein | phrog_24531 | unknown function | unknown function | 1 | 44898 | 45098 |
| AUX81842.1 | MG812487_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2710 | 2970 |
| AUX81851.1 | MG812487_p14 | hypothetical protein | phrog_781 | unknown function | unknown function | 1 | 6849 | 7148 |
| AUX81883.1 | MG812487_p46 | membrane protein | phrog_726 | unknown function | unknown function | 1 | 39835 | 40284 |
| AUX81868.1 | MG812487_p31 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 23227 | 23661 |
| AUX81926.1 | MG812487_p60 | hypothetical protein | phrog_28326 | unknown function | unknown function | 1 | 47178 | 47525 |
| AUX81918.1 | MG812487_p82 | hypothetical protein | phrog_26914 | unknown function | unknown function | 1 | 55751 | 55972 |
| AUX81900.1 | MG812487_p64 | hypothetical protein | phrog_16769 | unknown function | unknown function | 1 | 48259 | 48651 |
| AUX81861.1 | MG812487_p24 | hypothetical protein | phrog_14463 | unknown function | unknown function | 1 | 17691 | 18194 |
| AUX81915.1 | MG812487_p79 | hypothetical protein | phrog_24143 | unknown function | unknown function | 1 | 55107 | 55256 |
| AUX81893.1 | MG812487_p56 | HTH DNA binding protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 45095 | 45298 |
| AUX81920.1 | MG812487_p84 | hypothetical protein | phrog_15181 | unknown function | unknown function | 1 | 56391 | 56681 |
| AUX81885.1 | MG812487_p48 | hypothetical protein | phrog_17370 | unknown function | unknown function | 1 | 41096 | 41542 |
| AUX81904.1 | MG812487_p68 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50196 | 50375 |
| AUX81909.1 | MG812487_p73 | resolvase | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 51642 | 52280 |
| AUX81924.1 | MG812487_p88 | HTH DNA binding protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 57696 | 57959 |
| AUX81880.1 | MG812487_p43 | lysin A | phrog_2998 | endolysin | lysis | 1 | 36935 | 38683 |
| AUX81872.1 | MG812487_p35 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 29858 | 30814 |
| AUX81881.1 | MG812487_p44 | membrane protein | phrog_443 | holin | lysis | 1 | 38698 | 39165 |
| AUX81917.1 | MG812487_p81 | hypothetical protein | phrog_4852 | unknown function | unknown function | 1 | 55560 | 55754 |
| AUX81888.1 | MG812487_p51 | hypothetical protein | phrog_38185 | unknown function | unknown function | 1 | 42942 | 43112 |