| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG812489 |
Definition |
Mycobacterium phage Greg, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
NUCCORE |
Length |
51083 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
90 |
%GC |
63.41 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUX82037.1 | MG812489_p9 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 4152 | 4409 |
| AUX82033.1 | MG812489_p4 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 1214 | 1654 |
| AUX82032.1 | MG812489_p3 | hypothetical protein | phrog_4152 | unknown function | unknown function | 1 | 1054 | 1200 |
| AUX82050.1 | MG812489_p23 | major tail protein | phrog_117 | major tail protein | tail | 1 | 14890 | 15741 |
| AUX82078.1 | MG812489_p52 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36873 | 37013 |
| AUX82086.1 | MG812489_p61 | membrane protein | phrog_1019 | unknown function | unknown function | -1 | 40171 | 40257 |
| AUX82056.1 | MG812489_p30 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 23245 | 23691 |
| AUX82054.1 | MG812489_p28 | hypothetical protein | phrog_1543 | minor tail protein | tail | 1 | 21223 | 21405 |
| AUX82091.1 | MG812489_p66 | helix-turn-helix DNA binding domain protein | phrog_520 | unknown function | unknown function | -1 | 41821 | 42114 |
| AUX82095.1 | MG812489_p70 | hypothetical protein | phrog_16650 | unknown function | unknown function | -1 | 43482 | 43691 |
| AUX82082.1 | MG812489_p56 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38570 | 39091 |
| AUX82055.1 | MG812489_p29 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 21405 | 23207 |
| AUX82063.1 | MG812489_p37 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 28339 | 29142 |
| AUX82112.1 | MG812489_p87 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 49624 | 49773 |
| AUX82049.1 | MG812489_p22 | head-to-tail connector complex protein | phrog_123 | tail terminator | connector | 1 | 14435 | 14881 |
| AUX82080.1 | MG812489_p54 | hypothetical protein | phrog_1503 | unknown function | unknown function | -1 | 37777 | 37959 |
| AUX82113.1 | MG812489_p88 | hypothetical protein | phrog_7647 | unknown function | unknown function | -1 | 49770 | 49997 |
| AUX82053.1 | MG812489_p27 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 19169 | 21226 |
| AUX82069.1 | MG812489_p43 | hypothetical protein | phrog_1860 | unknown function | unknown function | -1 | 32118 | 32213 |
| AUX82068.1 | MG812489_p42 | hypothetical protein | phrog_2035 | unknown function | unknown function | -1 | 31951 | 32121 |
| AUX82057.1 | MG812489_p31 | membrane protein | phrog_981 | minor tail protein | tail | 1 | 23688 | 24035 |
| AUX82071.1 | MG812489_p45 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 32494 | 32877 |
| AUX82079.1 | MG812489_p53 | metallophosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 37013 | 37780 |
| AUX82107.1 | MG812489_p82 | hypothetical protein | phrog_6510 | unknown function | unknown function | -1 | 48747 | 48929 |
| AUX82051.1 | MG812489_p25 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15863 | 16240 |
| AUX82083.1 | MG812489_p58 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 39431 | 39589 |
| AUX82070.1 | MG812489_p44 | hypothetical protein | phrog_1971 | unknown function | unknown function | -1 | 32210 | 32497 |
| AUX82097.1 | MG812489_p72 | hypothetical protein | phrog_4285 | transposase | integration and excision | -1 | 44546 | 45253 |
| AUX82034.1 | MG812489_p6 | hypothetical protein | phrog_1197 | tail protein | tail | 1 | 2089 | 3159 |
| AUX82047.1 | MG812489_p20 | head-to-tail connector complex protein | phrog_320 | head closure Hc1 | connector | 1 | 13674 | 14036 |
| AUX82058.1 | MG812489_p32 | membrane protein | phrog_1397 | unknown function | unknown function | 1 | 24032 | 24379 |
| AUX82115.1 | MG812489_p90 | membrane protein | phrog_828 | unknown function | unknown function | -1 | 50499 | 50702 |
| AUX82035.1 | MG812489_p7 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 3169 | 3870 |
| AUX82099.1 | MG812489_p74 | hypothetical protein | phrog_6068 | unknown function | unknown function | -1 | 46047 | 46160 |
| AUX82111.1 | MG812489_p86 | hypothetical protein | phrog_2093 | unknown function | unknown function | -1 | 49475 | 49627 |
| AUX82098.1 | MG812489_p73 | hypothetical protein | phrog_4604 | unknown function | unknown function | -1 | 45589 | 46050 |
| AUX82030.1 | MG812489_p1 | hypothetical protein | phrog_4649 | unknown function | unknown function | 1 | 600 | 752 |
| AUX82089.1 | MG812489_p64 | dsDNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 40882 | 41691 |
| AUX82110.1 | MG812489_p85 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 49311 | 49478 |
| AUX82036.1 | MG812489_p8 | hypothetical protein | phrog_1718 | tail protein | tail | 1 | 3884 | 4144 |
| AUX82073.1 | MG812489_p47 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 33337 | 35124 |
| AUX82084.1 | MG812489_p59 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 39586 | 39720 |
| AUX82064.1 | MG812489_p38 | membrane protein | phrog_411 | unknown function | unknown function | 1 | 29263 | 29559 |
| AUX82043.1 | MG812489_p16 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 11383 | 11895 |
| AUX82093.1 | MG812489_p68 | helix-turn-helix DNA binding domain protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 42425 | 42616 |
| AUX82117.1 | MG812489_p24 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15863 | 16662 |
| AUX82076.1 | MG812489_p50 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 35910 | 36092 |
| AUX82065.1 | MG812489_p39 | integrase | phrog_95 | integrase | integration and excision | 1 | 29706 | 31220 |
| AUX82119.1 | MG812489_p57 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38937 | 39452 |
| AUX82044.1 | MG812489_p17 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 11905 | 12903 |
| AUX82114.1 | MG812489_p89 | membrane protein | phrog_2212 | unknown function | unknown function | -1 | 50270 | 50383 |
| AUX82088.1 | MG812489_p63 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 40616 | 40885 |
| AUX82090.1 | MG812489_p65 | membrane protein | phrog_1705 | unknown function | unknown function | -1 | 41678 | 41824 |
| AUX82081.1 | MG812489_p55 | hypothetical protein | phrog_1167 | phosphofructokinase | other | -1 | 37956 | 38573 |
| AUX82059.1 | MG812489_p33 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 24404 | 26257 |
| AUX82045.1 | MG812489_p18 | hypothetical protein | phrog_1857 | head-tail connector protein | connector | 1 | 12989 | 13225 |
| AUX82042.1 | MG812489_p15 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 10444 | 11325 |
| AUX82102.1 | MG812489_p77 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 46619 | 47014 |
| AUX82048.1 | MG812489_p21 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 14036 | 14431 |
| AUX82105.1 | MG812489_p80 | hypothetical protein | phrog_16071 | unknown function | unknown function | -1 | 48122 | 48484 |
| AUX82060.1 | MG812489_p34 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 26250 | 27728 |
| AUX82108.1 | MG812489_p83 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 48926 | 49126 |
| AUX82061.1 | MG812489_p35 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 27821 | 28141 |
| AUX82109.1 | MG812489_p84 | membrane protein | phrog_1155 | unknown function | unknown function | -1 | 49123 | 49311 |
| AUX82062.1 | MG812489_p36 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 28151 | 28342 |
| AUX82101.1 | MG812489_p76 | membrane protein | phrog_1584 | unknown function | unknown function | -1 | 46317 | 46622 |
| AUX82031.1 | MG812489_p2 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 749 | 1057 |
| AUX82046.1 | MG812489_p19 | head-to-tail connector complex protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 13225 | 13674 |
| AUX82106.1 | MG812489_p81 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 48481 | 48750 |
| AUX82116.1 | MG812489_p13 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 7320 | 9008 |
| AUX82072.1 | MG812489_p46 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 32874 | 33359 |
| AUX82075.1 | MG812489_p49 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 35422 | 35913 |
| AUX82118.1 | MG812489_p5 | hypothetical protein | phrog_7087 | unknown function | unknown function | 1 | 1733 | 2023 |
| AUX82103.1 | MG812489_p78 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 47056 | 47568 |
| AUX82104.1 | MG812489_p79 | membrane protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 47830 | 48129 |
| AUX82100.1 | MG812489_p75 | hypothetical protein | phrog_5947 | unknown function | unknown function | -1 | 46153 | 46320 |
| AUX82066.1 | MG812489_p40 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 31296 | 31568 |
| AUX82040.1 | MG812489_p12 | HNH endonuclease | phrog_8660 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 6818 | 7336 |
| AUX82085.1 | MG812489_p60 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39717 | 40184 |
| AUX82092.1 | MG812489_p67 | hypothetical protein | phrog_2184 | unknown function | unknown function | -1 | 42111 | 42428 |
| AUX82052.1 | MG812489_p26 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 16674 | 19145 |
| AUX82087.1 | MG812489_p62 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 40254 | 40619 |
| AUX82067.1 | MG812489_p41 | hypothetical protein | phrog_2387 | nucleotide kinase | other | -1 | 31565 | 31954 |
| AUX82077.1 | MG812489_p51 | helix-turn-helix DNA binding domain protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 36089 | 36880 |
| AUX82038.1 | MG812489_p10 | lysin A | phrog_317 | endolysin | lysis | 1 | 4419 | 5840 |
| AUX82041.1 | MG812489_p14 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 9005 | 10447 |
| AUX82096.1 | MG812489_p71 | exonuclease/helicase | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43722 | 44540 |
| AUX82094.1 | MG812489_p69 | methyltransferase | phrog_67 | DNA methyltransferase | other | -1 | 42613 | 43455 |
| AUX82039.1 | MG812489_p11 | lysin B | phrog_102 | endolysin | lysis | 1 | 5830 | 6798 |
| AUX82074.1 | MG812489_p48 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 35161 | 35391 |