| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG812490 |
Definition |
Mycobacterium phage Holeinone, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Rosebushvirus; unclassified Rosebushvirus. |
DB of origin |
NUCCORE |
Length |
67044 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
91 |
%GC |
68.89 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUX82202.1 | MG812490_p35 | hypothetical protein | phrog_948 | unknown function | unknown function | 1 | 34268 | 34657 |
| AUX82200.1 | MG812490_p33 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 32676 | 33839 |
| AUX82204.1 | MG812490_p37 | hypothetical protein | phrog_8248 | unknown function | unknown function | 1 | 35310 | 35462 |
| AUX82197.1 | MG812490_p30 | minor tail protein | phrog_838 | unknown function | unknown function | 1 | 27468 | 28904 |
| AUX82203.1 | MG812490_p36 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 34669 | 35313 |
| AUX82136.1 | MG812490_p79 | hypothetical protein | phrog_7479 | unknown function | unknown function | -1 | 61406 | 61831 |
| AUX82179.1 | MG812490_p11 | hypothetical protein | phrog_781 | unknown function | unknown function | 1 | 7362 | 7700 |
| AUX82144.1 | MG812490_p87 | hypothetical protein | singleton | unknown function | unknown function | -1 | 65223 | 65312 |
| AUX82133.1 | MG812490_p76 | hypothetical protein | phrog_7367 | unknown function | unknown function | -1 | 60323 | 60634 |
| AUX82147.1 | MG812490_p90 | hypothetical protein | phrog_6718 | unknown function | unknown function | -1 | 65814 | 66005 |
| AUX82166.1 | MG812490_p60 | hypothetical protein | phrog_3835 | unknown function | unknown function | -1 | 53317 | 53787 |
| AUX82178.1 | MG812490_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7046 | 7330 |
| AUX82135.1 | MG812490_p78 | hypothetical protein | phrog_7525 | unknown function | unknown function | -1 | 61041 | 61307 |
| AUX82208.1 | MG812490_p41 | hypothetical protein | phrog_941 | unknown function | unknown function | 1 | 37716 | 38081 |
| AUX82196.1 | MG812490_p29 | tape measure protein | phrog_934 | tail length tape measure protein | tail | 1 | 21826 | 27459 |
| AUX82205.1 | MG812490_p38 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 35459 | 36058 |
| AUX82128.1 | MG812490_p71 | hypothetical protein | phrog_4461 | unknown function | unknown function | -1 | 58912 | 59016 |
| AUX82183.1 | MG812490_p15 | major capsid protein | phrog_777 | major head protein | head and packaging | 1 | 12410 | 14440 |
| AUX82154.1 | MG812490_p48 | holin | phrog_526 | holin | lysis | 1 | 42288 | 42821 |
| AUX82177.1 | MG812490_p9 | resolvase | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 6474 | 7049 |
| AUX82164.1 | MG812490_p58 | hypothetical protein | phrog_3025 | unknown function | unknown function | -1 | 52452 | 52832 |
| AUX82148.1 | MG812490_p91 | hypothetical protein | phrog_7435 | unknown function | unknown function | -1 | 66101 | 66880 |
| AUX82206.1 | MG812490_p39 | hypothetical protein | phrog_3329 | unknown function | unknown function | 1 | 36055 | 37368 |
| AUX82186.1 | MG812490_p18 | hypothetical protein | phrog_2272 | unknown function | unknown function | 1 | 16138 | 16680 |
| AUX82190.1 | MG812490_p22 | hypothetical protein | phrog_7051 | unknown function | unknown function | -1 | 18713 | 18826 |
| AUX82161.1 | MG812490_p55 | DNA primase/polymerase | phrog_906 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | -1 | 47670 | 50417 |
| AUX82139.1 | MG812490_p82 | hypothetical protein | phrog_6719 | unknown function | unknown function | -1 | 62193 | 62687 |
| AUX82209.1 | MG812490_p42 | hypothetical protein | phrog_892 | tail fiber protein | tail | 1 | 38119 | 38523 |
| AUX82158.1 | MG812490_p52 | hypothetical protein | phrog_7912 | unknown function | unknown function | -1 | 46616 | 46777 |
| AUX82127.1 | MG812490_p70 | HNH endonuclease | phrog_960 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 58623 | 58925 |
| AUX82198.1 | MG812490_p31 | minor tail protein | phrog_837 | minor tail protein | tail | 1 | 28907 | 29956 |
| AUX82123.1 | MG812490_p66 | helix-turn-helix DNA binding domain protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 56073 | 56723 |
| AUX82125.1 | MG812490_p68 | hypothetical protein | phrog_7186 | unknown function | unknown function | 1 | 57299 | 57682 |
| AUX82189.1 | MG812490_p21 | major tail protein | phrog_792 | major tail protein | tail | 1 | 17578 | 18654 |
| AUX82157.1 | MG812490_p51 | DNA helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 44830 | 46545 |
| AUX82138.1 | MG812490_p80 | hypothetical protein | phrog_8500 | unknown function | unknown function | -1 | 61821 | 61982 |
| AUX82156.1 | MG812490_p50 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43466 | 44833 |
| AUX82195.1 | MG812490_p28 | tail assembly chaperone | phrog_6941 | unknown function | unknown function | 1 | 21315 | 21800 |
| AUX82130.1 | MG812490_p73 | hypothetical protein | phrog_7876 | unknown function | unknown function | -1 | 59234 | 59749 |
| AUX82163.1 | MG812490_p57 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 50626 | 52455 |
| AUX82185.1 | MG812490_p17 | hypothetical protein | phrog_970 | unknown function | unknown function | 1 | 15352 | 16101 |
| AUX82180.1 | MG812490_p12 | portal protein | phrog_776 | portal protein | head and packaging | 1 | 7727 | 9616 |
| AUX82143.1 | MG812490_p86 | hypothetical protein | phrog_2972 | unknown function | unknown function | -1 | 64836 | 65129 |
| AUX82152.1 | MG812490_p46 | hypothetical protein | phrog_636 | unknown function | unknown function | -1 | 39917 | 40681 |
| AUX82199.1 | MG812490_p32 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 29953 | 32673 |
| AUX82140.1 | MG812490_p83 | hypothetical protein | phrog_7394 | unknown function | unknown function | -1 | 62754 | 62975 |
| AUX82165.1 | MG812490_p59 | hypothetical protein | phrog_993 | unknown function | unknown function | -1 | 52829 | 53320 |
| AUX82192.1 | MG812490_p25 | hypothetical protein | phrog_810 | unknown function | unknown function | 1 | 19910 | 20470 |
| AUX82134.1 | MG812490_p77 | hypothetical protein | phrog_8341 | unknown function | unknown function | -1 | 60698 | 60943 |
| AUX82174.1 | MG812490_p6 | GTP cyclohydrolase I | phrog_2197 | GTP cyclohydrolase | other | 1 | 3671 | 4246 |
| AUX82124.1 | MG812490_p67 | hypothetical protein | phrog_1031 | unknown function | unknown function | 1 | 56725 | 57258 |
| AUX82210.1 | MG812490_p23 | hypothetical protein | phrog_1318 | unknown function | unknown function | -1 | 18826 | 19017 |
| AUX82153.1 | MG812490_p47 | lysin A | phrog_317 | endolysin | lysis | 1 | 40789 | 42288 |
| AUX82155.1 | MG812490_p49 | hypothetical protein | phrog_870 | unknown function | unknown function | -1 | 42939 | 43451 |
| AUX82207.1 | MG812490_p40 | hypothetical protein | phrog_915 | unknown function | unknown function | 1 | 37399 | 37755 |
| AUX82193.1 | MG812490_p26 | hypothetical protein | phrog_901 | unknown function | unknown function | 1 | 20479 | 20832 |
| AUX82149.1 | MG812490_p43 | hydrolase | phrog_2804 | virion structural protein | head and packaging | 1 | 38524 | 39219 |
| AUX82191.1 | MG812490_p24 | hypothetical protein | phrog_783 | head-tail adaptor | connector | 1 | 19128 | 19913 |
| AUX82171.1 | MG812490_p3 | QueC-like queosine biosynthesis protein | phrog_1550 | QueC-like queuosine biosynthesis | moron, auxiliary metabolic gene and host takeover | 1 | 1826 | 2533 |
| AUX82150.1 | MG812490_p44 | helix-turn-helix DNA binding domain protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 39216 | 39422 |
| AUX82122.1 | MG812490_p65 | hypothetical protein | phrog_7544 | unknown function | unknown function | 1 | 55735 | 56076 |
| AUX82151.1 | MG812490_p45 | helix-turn-helix DNA binding domain protein | phrog_955 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 39453 | 39842 |
| AUX82201.1 | MG812490_p34 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 33870 | 34259 |
| AUX82172.1 | MG812490_p4 | QueD-like queosine biosynthesis protein | phrog_2389 | QueD-like 6-pyruvoyl-tetrahydropterin synthase | moron, auxiliary metabolic gene and host takeover | 1 | 2530 | 2961 |
| AUX82131.1 | MG812490_p74 | hypothetical protein | phrog_8177 | unknown function | unknown function | -1 | 59743 | 60021 |
| AUX82175.1 | MG812490_p7 | terminase | phrog_38 | terminase large subunit | head and packaging | 1 | 4230 | 5924 |
| AUX82173.1 | MG812490_p5 | QueE-like queosine biosynthesis protein | phrog_2076 | QueE-like radical SAM domain | moron, auxiliary metabolic gene and host takeover | 1 | 2958 | 3671 |
| AUX82137.1 | MG812490_p81 | hypothetical protein | phrog_1933 | unknown function | unknown function | -1 | 61984 | 62196 |
| AUX82184.1 | MG812490_p16 | hypothetical protein | phrog_779 | unknown function | unknown function | 1 | 14534 | 15352 |
| AUX82129.1 | MG812490_p72 | HicA-like toxin | phrog_2089 | unknown function | unknown function | -1 | 59013 | 59237 |
| AUX82167.1 | MG812490_p61 | hypothetical protein | phrog_982 | unknown function | unknown function | -1 | 54048 | 54497 |
| AUX82176.1 | MG812490_p8 | hypothetical protein | phrog_5935 | unknown function | unknown function | -1 | 5921 | 6391 |
| AUX82181.1 | MG812490_p13 | capsid morphogenesis protein | phrog_859 | portal protein | head and packaging | 1 | 9616 | 12063 |
| AUX82168.1 | MG812490_p62 | hypothetical protein | phrog_8754 | unknown function | unknown function | 1 | 54566 | 54745 |
| AUX82187.1 | MG812490_p19 | hypothetical protein | phrog_2344 | unknown function | unknown function | 1 | 16677 | 17159 |
| AUX82160.1 | MG812490_p54 | hypothetical protein | phrog_1371 | unknown function | unknown function | -1 | 47114 | 47605 |
| AUX82170.1 | MG812490_p2 | queuine tRNA-ribosyltransferase | phrog_7068 | queuine tRNA-ribosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 789 | 1829 |
| AUX82120.1 | MG812490_p63 | hypothetical protein | phrog_996 | unknown function | unknown function | 1 | 54732 | 55433 |
| AUX82188.1 | MG812490_p20 | hypothetical protein | phrog_2525 | unknown function | unknown function | 1 | 17156 | 17488 |
| AUX82126.1 | MG812490_p69 | helix-turn-helix DNA binding domain protein | phrog_928 | unknown function | unknown function | 1 | 57679 | 58392 |
| AUX82132.1 | MG812490_p75 | hypothetical protein | phrog_7463 | unknown function | unknown function | -1 | 60018 | 60326 |
| AUX82194.1 | MG812490_p27 | tail assembly chaperone | phrog_5 | tail completion or Neck1 protein | connector | 1 | 20832 | 21260 |
| AUX82145.1 | MG812490_p88 | hypothetical protein | phrog_8227 | unknown function | unknown function | -1 | 65309 | 65446 |
| AUX82159.1 | MG812490_p53 | hypothetical protein | phrog_3892 | unknown function | unknown function | -1 | 46779 | 47114 |
| AUX82121.1 | MG812490_p64 | ribbon-helix-helix DNA binding domain protein | phrog_1016 | unknown function | unknown function | 1 | 55443 | 55703 |
| AUX82146.1 | MG812490_p89 | hypothetical protein | phrog_7256 | unknown function | unknown function | -1 | 65443 | 65811 |
| AUX82169.1 | MG812490_p1 | helix-turn-helix DNA binding domain protein | phrog_723 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 1 | 792 |
| AUX82182.1 | MG812490_p14 | hypothetical protein | phrog_2069 | unknown function | unknown function | 1 | 12063 | 12236 |
| AUX82141.1 | MG812490_p84 | hypothetical protein | phrog_1010 | unknown function | unknown function | -1 | 63085 | 63681 |
| AUX82162.1 | MG812490_p56 | hypothetical protein | phrog_2526 | unknown function | unknown function | -1 | 50462 | 50623 |
| AUX82142.1 | MG812490_p85 | hypothetical protein | phrog_1221 | unknown function | unknown function | -1 | 63692 | 64762 |