Genomic map of Mycobacterium phage Pippin (MG812495)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG812495
Definition
Mycobacterium phage Pippin, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
52034
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
97
%GC
63.75
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUX82423.1 MG812495_p37 hypothetical protein phrog_754 minor tail protein tail 1 28398 29201
AUX82425.1 MG812495_p39 integrase phrog_95 integrase integration and excision 1 29765 31279
AUX82447.1 MG812495_p63 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 40573 41382
AUX82459.1 MG812495_p75 hypothetical protein phrog_1809 unknown function unknown function -1 45589 45984
AUX82408.1 MG812495_p22 head-to-tail connector complex protein phrog_123 tail terminator connector 1 14494 14940
AUX82399.1 MG812495_p13 terminase large subunit phrog_9 terminase large subunit head and packaging 1 7322 9010
AUX82422.1 MG812495_p36 hypothetical protein phrog_1560 unknown function unknown function 1 28210 28401
AUX82396.1 MG812495_p10 lysin A phrog_317 endolysin lysis 1 4409 5842
AUX82395.1 MG812495_p9 hypothetical protein phrog_747 unknown function unknown function 1 4152 4409
AUX82482.1 MG812495_p57 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38981 39496
AUX82389.1 MG812495_p2 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 749 1057
AUX82403.1 MG812495_p17 major capsid protein phrog_10 major head protein head and packaging 1 11968 12978
AUX82415.1 MG812495_p29 minor tail protein phrog_110 minor tail protein tail 1 21464 23266
AUX82452.1 MG812495_p68 hypothetical protein phrog_5961 unknown function unknown function -1 42306 42464
AUX82437.1 MG812495_p51 helix-turn-helix DNA binding domain protein phrog_354 sigma-K factor transcription regulation -1 36133 36924
AUX82421.1 MG812495_p35 hypothetical protein phrog_644 unknown function unknown function 1 27880 28200
AUX82428.1 MG812495_p42 hypothetical protein phrog_2035 unknown function unknown function -1 31995 32165
AUX82466.1 MG812495_p82 hypothetical protein phrog_12963 unknown function unknown function -1 47923 48159
AUX82463.1 MG812495_p79 hypothetical protein phrog_6510 unknown function unknown function -1 47362 47544
AUX82401.1 MG812495_p15 capsid maturation protein phrog_193 head maturation protease head and packaging 1 10446 11387
AUX82472.1 MG812495_p88 hypothetical protein phrog_7647 unknown function unknown function -1 49069 49296
AUX82440.1 MG812495_p54 hypothetical protein phrog_1503 unknown function unknown function -1 37821 38003
AUX82458.1 MG812495_p74 membrane protein phrog_1584 unknown function unknown function -1 45275 45592
AUX82454.1 MG812495_p70 hypothetical protein phrog_4285 transposase integration and excision -1 43292 44002
AUX82469.1 MG812495_p85 hypothetical protein phrog_11336 HNH endonuclease DNA, RNA and nucleotide metabolism -1 48503 48697
AUX82433.1 MG812495_p47 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 33381 35168
AUX82465.1 MG812495_p81 membrane protein phrog_1155 unknown function unknown function -1 47738 47926
AUX82473.1 MG812495_p89 hypothetical protein phrog_5017 unknown function unknown function -1 49592 49957
AUX82443.1 MG812495_p58 hypothetical protein phrog_1783 unknown function unknown function -1 39475 39633
AUX82464.1 MG812495_p80 hypothetical protein phrog_1387 unknown function unknown function -1 47541 47741
AUX82483.1 MG812495_p61 membrane protein phrog_1019 unknown function unknown function -1 40224 40310
AUX82444.1 MG812495_p59 hypothetical protein phrog_397 unknown function unknown function -1 39630 39764
AUX82388.1 MG812495_p1 hypothetical protein phrog_4649 unknown function unknown function 1 600 752
AUX82451.1 MG812495_p67 helix-turn-helix DNA binding domain protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 42115 42309
AUX82442.1 MG812495_p56 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38614 39135
AUX82468.1 MG812495_p84 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 48306 48473
AUX82406.1 MG812495_p20 head-to-tail connector complex protein phrog_320 head closure Hc1 connector 1 13733 14095
AUX82405.1 MG812495_p19 head-to-tail connector complex protein phrog_137 head-tail adaptor Ad1 connector 1 13284 13733
AUX82470.1 MG812495_p86 hypothetical protein phrog_8345 unknown function unknown function -1 48694 48900
AUX82430.1 MG812495_p44 hypothetical protein phrog_1971 unknown function unknown function -1 32254 32541
AUX82420.1 MG812495_p34 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 26309 27787
AUX82456.1 MG812495_p72 hypothetical protein phrog_6068 unknown function unknown function -1 44798 44911
AUX82480.1 MG812495_p96 hypothetical protein phrog_13308 unknown function unknown function -1 51380 51631
AUX82432.1 MG812495_p46 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 32918 33403
AUX82427.1 MG812495_p41 hypothetical protein phrog_2387 nucleotide kinase other -1 31624 31995
AUX82429.1 MG812495_p43 hypothetical protein phrog_1860 unknown function unknown function -1 32162 32257
AUX82412.1 MG812495_p26 tape measure protein phrog_305 tail length tape measure protein tail 1 16733 19204
AUX82414.1 MG812495_p28 hypothetical protein phrog_1543 minor tail protein tail 1 21282 21464
AUX82431.1 MG812495_p45 hypothetical protein phrog_383 unknown function unknown function -1 32538 32921
AUX82484.1 MG812495_p97 hypothetical protein singleton unknown function unknown function -1 51624 51905
AUX82407.1 MG812495_p21 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 14095 14490
AUX82435.1 MG812495_p49 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 35466 35957
AUX82434.1 MG812495_p48 hypothetical protein phrog_1781 unknown function unknown function -1 35205 35435
AUX82419.1 MG812495_p33 minor tail protein phrog_346 minor tail protein tail 1 24463 26316
AUX82439.1 MG812495_p53 metallophosphoesterase phrog_221 metallo-phosphoesterase other -1 37057 37824
AUX82391.1 MG812495_p4 terminase small subunit phrog_226 minor tail protein tail 1 1214 1654
AUX82409.1 MG812495_p23 major tail protein phrog_117 major tail protein tail 1 14949 15800
AUX82424.1 MG812495_p38 membrane protein phrog_411 unknown function unknown function 1 29322 29618
AUX82462.1 MG812495_p78 hypothetical protein phrog_1720 unknown function unknown function -1 47096 47365
AUX82393.1 MG812495_p7 hypothetical protein phrog_553 minor tail protein tail 1 3169 3870
AUX82461.1 MG812495_p77 membrane protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 46800 47099
AUX82438.1 MG812495_p52 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 36917 37057
AUX82471.1 MG812495_p87 hypothetical protein phrog_932 unknown function unknown function -1 48920 49072
AUX82478.1 MG812495_p94 hypothetical protein phrog_3574 unknown function unknown function 1 51088 51246
AUX82410.1 MG812495_p25 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15922 16299
AUX82417.1 MG812495_p31 membrane protein phrog_981 minor tail protein tail 1 23747 24094
AUX82475.1 MG812495_p91 membrane protein phrog_2212 unknown function unknown function -1 50172 50255
AUX82479.1 MG812495_p95 hypothetical protein singleton unknown function unknown function -1 51288 51383
AUX82446.1 MG812495_p62 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 40307 40576
AUX82476.1 MG812495_p92 hypothetical protein phrog_2985 unknown function unknown function 1 50407 50562
AUX82397.1 MG812495_p11 lysin B phrog_102 endolysin lysis 1 5832 6800
AUX82404.1 MG812495_p18 hypothetical protein phrog_1857 head-tail connector protein connector 1 13057 13284
AUX82474.1 MG812495_p90 hypothetical protein phrog_5533 unknown function unknown function -1 49957 50175
AUX82441.1 MG812495_p55 hypothetical protein phrog_1167 phosphofructokinase other -1 38000 38617
AUX82449.1 MG812495_p65 helix-turn-helix DNA binding domain protein phrog_520 unknown function unknown function -1 41512 41805
AUX82402.1 MG812495_p16 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 11446 11958
AUX82390.1 MG812495_p3 hypothetical protein phrog_4152 unknown function unknown function 1 1054 1200
AUX82460.1 MG812495_p76 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 46026 46538
AUX82477.1 MG812495_p93 membrane protein phrog_828 unknown function unknown function 1 50646 50852
AUX82426.1 MG812495_p40 hypothetical protein phrog_1966 unknown function unknown function -1 31355 31627
AUX82450.1 MG812495_p66 hypothetical protein phrog_2184 unknown function unknown function -1 41802 42122
AUX82411.1 MG812495_p24 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15922 16721
AUX82481.1 MG812495_p5 hypothetical protein phrog_7087 unknown function unknown function 1 1733 2023
AUX82448.1 MG812495_p64 membrane protein phrog_1705 unknown function unknown function -1 41369 41515
AUX82400.1 MG812495_p14 portal protein phrog_104 portal protein head and packaging 1 9007 10449
AUX82418.1 MG812495_p32 membrane protein phrog_1397 unknown function unknown function 1 24091 24438
AUX82445.1 MG812495_p60 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39761 40237
AUX82455.1 MG812495_p71 hypothetical protein phrog_4604 unknown function unknown function -1 44340 44801
AUX82413.1 MG812495_p27 minor tail protein phrog_106 minor tail protein tail 1 19228 21285
AUX82467.1 MG812495_p83 hypothetical protein phrog_9825 unknown function unknown function -1 48156 48305
AUX82436.1 MG812495_p50 hypothetical protein phrog_499 unknown function unknown function -1 35954 36136
AUX82398.1 MG812495_p12 HNH endonuclease phrog_8660 HNH endonuclease DNA, RNA and nucleotide metabolism 1 6820 7338
AUX82453.1 MG812495_p69 exonuclease/helicase phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 42492 43295
AUX82416.1 MG812495_p30 minor tail protein phrog_352 minor tail protein tail 1 23304 23750
AUX82392.1 MG812495_p6 hypothetical protein phrog_1197 tail protein tail 1 2089 3159
AUX82394.1 MG812495_p8 hypothetical protein phrog_1718 tail protein tail 1 3884 4144
AUX82457.1 MG812495_p73 hypothetical protein phrog_5947 unknown function unknown function -1 44904 45056