| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG820635 |
Definition |
Propionibacterium phage pa29399-1-D_1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus. |
DB of origin |
NUCCORE |
Length |
29370 |
Host Name |
Propionibacterium |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
54.07 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUV62188.1 | MG820635_p31 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20612 | 21283 |
| AUV62187.1 | MG820635_p30 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20004 | 20567 |
| AUV62175.1 | MG820635_p18 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13407 | 14225 |
| AUV62190.1 | MG820635_p33 | hypothetical protein | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21843 | 22706 |
| AUX13516.1 | MG820635_p8 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5622 | 6092 |
| AUV62182.1 | MG820635_p25 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17608 | 17892 |
| AUV62191.1 | MG820635_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22751 | 23209 |
| AUV62179.1 | MG820635_p22 | hypothetical protein | phrog_443 | holin | lysis | 1 | 16243 | 16644 |
| AUV62197.1 | MG820635_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24968 | 25081 |
| AUV62186.1 | MG820635_p29 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19447 | 20007 |
| AUV62194.1 | MG820635_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24594 | 24947 |
| AUV62181.1 | MG820635_p24 | hypothetical protein | phrog_1729 | unknown function | unknown function | -1 | 17224 | 17604 |
| AUV62172.1 | MG820635_p15 | tail length tape-measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8500 | 11265 |
| AUV62178.1 | MG820635_p21 | hypothetical protein | phrog_670 | endolysin | lysis | 1 | 15376 | 16236 |
| AUX13518.1 | MG820635_p28 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19272 | 19409 |
| AUV62180.1 | MG820635_p23 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16730 | 17218 |
| AUV62196.1 | MG820635_p40 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25253 | 25480 |
| AUV62200.1 | MG820635_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26800 | 26979 |
| AUV62161.1 | MG820635_p3 | portal (connector) protein | phrog_104 | portal protein | head and packaging | 1 | 1886 | 3034 |
| AUV62173.1 | MG820635_p16 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 11281 | 12222 |
| AUV62174.1 | MG820635_p17 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 12230 | 13387 |
| AUV62195.1 | MG820635_p39 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25053 | 25256 |
| AUV62198.1 | MG820635_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26157 | 26468 |
| AUV62170.1 | MG820635_p13 | hypothetical protein | phrog_1927 | tail assembly chaperone | tail | 1 | 7810 | 8106 |
| AUV62184.1 | MG820635_p27 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18235 | 19275 |
| AUV62160.1 | MG820635_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 378 | 1889 |
| AUV62167.1 | MG820635_p10 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6448 | 6738 |
| AUX13517.1 | MG820635_p12 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7146 | 7781 |
| AUV62192.1 | MG820635_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23249 | 23659 |
| AUV62183.1 | MG820635_p26 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17905 | 18225 |
| AUV62201.1 | MG820635_p45 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29006 | 29308 |
| AUX13519.1 | MG820635_p41 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25503 | 26036 |
| AUV62176.1 | MG820635_p19 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14267 | 14527 |
| AUV62168.1 | MG820635_p11 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6735 | 7106 |
| AUV62189.1 | MG820635_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21481 | 21837 |
| AUV62177.1 | MG820635_p20 | tail fiber protein | phrog_1806 | collagen like minor tail | tail | 1 | 14527 | 15324 |
| AUV62163.1 | MG820635_p6 | capsid and scaffold protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4075 | 4629 |
| AUV62164.1 | MG820635_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4636 | 5583 |
| AUV62166.1 | MG820635_p9 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6094 | 6441 |
| AUV62193.1 | MG820635_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23656 | 24594 |
| AUV62171.1 | MG820635_p14 | hypothetical protein | phrog_3166 | unknown function | unknown function | 1 | 8205 | 8492 |
| AUV62159.1 | MG820635_p1 | hypothetical protein | phrog_1897 | terminase small subunit | head and packaging | 1 | 2 | 373 |
| AUV62199.1 | MG820635_p43 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26504 | 26812 |
| AUX13515.1 | MG820635_p4 | portal (connector) protein | phrog_35314 | head-tail connector protein | connector | 1 | 3039 | 3209 |
| AUV62162.1 | MG820635_p5 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3216 | 3971 |