Genomic map of Propionibacterium phage pa29399-1-D_1 (MG820635)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG820635
Definition
Propionibacterium phage pa29399-1-D_1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus.
DB of origin
NUCCORE
Length
29370
Host Name
Propionibacterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
45
%GC
54.07
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUV62188.1 MG820635_p31 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20612 21283
AUV62187.1 MG820635_p30 hypothetical protein phrog_1881 unknown function unknown function -1 20004 20567
AUV62175.1 MG820635_p18 hypothetical protein phrog_1910 lectin other 1 13407 14225
AUV62190.1 MG820635_p33 hypothetical protein phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 21843 22706
AUX13516.1 MG820635_p8 hypothetical protein phrog_1290 head-tail adaptor connector 1 5622 6092
AUV62182.1 MG820635_p25 hypothetical protein phrog_1947 unknown function unknown function -1 17608 17892
AUV62191.1 MG820635_p34 hypothetical protein phrog_1288 unknown function unknown function -1 22751 23209
AUV62179.1 MG820635_p22 hypothetical protein phrog_443 holin lysis 1 16243 16644
AUV62197.1 MG820635_p38 hypothetical protein singleton unknown function unknown function 1 24968 25081
AUV62186.1 MG820635_p29 hypothetical protein phrog_2548 unknown function unknown function -1 19447 20007
AUV62194.1 MG820635_p37 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24594 24947
AUV62181.1 MG820635_p24 hypothetical protein phrog_1729 unknown function unknown function -1 17224 17604
AUV62172.1 MG820635_p15 tail length tape-measure protein phrog_58 tail length tape measure protein tail 1 8500 11265
AUV62178.1 MG820635_p21 hypothetical protein phrog_670 endolysin lysis 1 15376 16236
AUX13518.1 MG820635_p28 hypothetical protein phrog_1923 unknown function unknown function -1 19272 19409
AUV62180.1 MG820635_p23 hypothetical protein phrog_2092 unknown function unknown function -1 16730 17218
AUV62196.1 MG820635_p40 hypothetical protein phrog_1884 unknown function unknown function -1 25253 25480
AUV62200.1 MG820635_p44 hypothetical protein singleton unknown function unknown function 1 26800 26979
AUV62161.1 MG820635_p3 portal (connector) protein phrog_104 portal protein head and packaging 1 1886 3034
AUV62173.1 MG820635_p16 minor tail protein phrog_106 minor tail protein tail 1 11281 12222
AUV62174.1 MG820635_p17 hypothetical protein phrog_110 minor tail protein tail 1 12230 13387
AUV62195.1 MG820635_p39 hypothetical protein phrog_1937 unknown function unknown function -1 25053 25256
AUV62198.1 MG820635_p42 hypothetical protein phrog_919 unknown function unknown function -1 26157 26468
AUV62170.1 MG820635_p13 hypothetical protein phrog_1927 tail assembly chaperone tail 1 7810 8106
AUV62184.1 MG820635_p27 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18235 19275
AUV62160.1 MG820635_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 378 1889
AUV62167.1 MG820635_p10 hypothetical protein phrog_387 neck protein connector 1 6448 6738
AUX13517.1 MG820635_p12 major tail protein phrog_117 major tail protein tail 1 7146 7781
AUV62192.1 MG820635_p35 hypothetical protein phrog_1890 unknown function unknown function -1 23249 23659
AUV62183.1 MG820635_p26 hypothetical protein phrog_1340 unknown function unknown function -1 17905 18225
AUV62201.1 MG820635_p45 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 29006 29308
AUX13519.1 MG820635_p41 hypothetical protein phrog_1908 unknown function unknown function -1 25503 26036
AUV62176.1 MG820635_p19 hypothetical protein phrog_1958 minor tail protein tail 1 14267 14527
AUV62168.1 MG820635_p11 hypothetical protein phrog_1892 minor tail protein tail 1 6735 7106
AUV62189.1 MG820635_p32 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 21481 21837
AUV62177.1 MG820635_p20 tail fiber protein phrog_1806 collagen like minor tail tail 1 14527 15324
AUV62163.1 MG820635_p6 capsid and scaffold protein phrog_1879 head scaffolding protein head and packaging 1 4075 4629
AUV62164.1 MG820635_p7 major capsid protein phrog_10 major head protein head and packaging 1 4636 5583
AUV62166.1 MG820635_p9 hypothetical protein phrog_501 head closure Hc1 connector 1 6094 6441
AUV62193.1 MG820635_p36 exonuclease phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23656 24594
AUV62171.1 MG820635_p14 hypothetical protein phrog_3166 unknown function unknown function 1 8205 8492
AUV62159.1 MG820635_p1 hypothetical protein phrog_1897 terminase small subunit head and packaging 1 2 373
AUV62199.1 MG820635_p43 hypothetical protein phrog_919 unknown function unknown function -1 26504 26812
AUX13515.1 MG820635_p4 portal (connector) protein phrog_35314 head-tail connector protein connector 1 3039 3209
AUV62162.1 MG820635_p5 hypothetical protein phrog_193 head maturation protease head and packaging 1 3216 3971