Genomic map of Propionibacterium phage pa29399-1-D_2 (MG820636)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG820636
Definition
Propionibacterium phage pa29399-1-D_2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus.
DB of origin
NUCCORE
Length
28892
Host Name
Propionibacterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
44
%GC
54.37
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUV62219.1 MG820636_p18 hypothetical protein phrog_1910 lectin other 1 13385 14215
AUV62228.1 MG820636_p28 hypothetical protein phrog_1923 unknown function unknown function -1 19060 19251
AUV62233.1 MG820636_p33 hypothetical protein phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 21241 22194
AUV62208.1 MG820636_p8 hypothetical protein phrog_1290 head-tail adaptor connector 1 5614 6093
AUV62213.1 MG820636_p13 hypothetical protein phrog_1927 tail assembly chaperone tail 1 7800 8096
AUV62205.1 MG820636_p5 hypothetical protein phrog_193 head maturation protease head and packaging 1 3208 3963
AUV62227.1 MG820636_p27 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18017 19063
AUV62222.1 MG820636_p22 hypothetical protein phrog_443 holin lysis 1 16227 16622
AUV62215.1 MG820636_p15 tail length tape-measure protein phrog_58 tail length tape measure protein tail 1 8490 11255
AUV62232.1 MG820636_p32 hypothetical protein phrog_11072 unknown function unknown function -1 20975 21172
AUV62226.1 MG820636_p26 hypothetical protein phrog_1340 unknown function unknown function -1 17686 18006
AUV62229.1 MG820636_p29 hypothetical protein phrog_5969 unknown function unknown function -1 19235 19447
AUV62221.1 MG820636_p21 hypothetical protein phrog_670 endolysin lysis 1 15408 16214
AUV62203.1 MG820636_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 373 1884
AUV62238.1 MG820636_p38 hypothetical protein phrog_1937 unknown function unknown function -1 24552 24752
AUV62217.1 MG820636_p17 hypothetical protein phrog_110 minor tail protein tail 1 12220 13377
AUV62220.1 MG820636_p20 tail fiber protein phrog_1806 collagen like minor tail tail 1 14527 15318
AUV62223.1 MG820636_p23 hypothetical protein phrog_21407 unknown function unknown function -1 16713 16985
AUV62212.1 MG820636_p12 major tail protein phrog_117 major tail protein tail 1 7147 7773
AUV62241.1 MG820636_p41 hypothetical protein phrog_919 unknown function unknown function -1 25653 25964
AUX13522.1 MG820636_p16 minor tail protein phrog_106 minor tail protein tail 1 11271 12212
AUV62237.1 MG820636_p37 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24096 24449
AUV62224.1 MG820636_p24 hypothetical protein phrog_1729 unknown function unknown function -1 16991 17383
AUX13520.1 MG820636_p4 portal (connector) protein phrog_35314 head-tail connector protein connector 1 3031 3201
AUV62210.1 MG820636_p10 hypothetical protein phrog_387 neck protein connector 1 6449 6739
AUV62225.1 MG820636_p25 hypothetical protein phrog_1947 unknown function unknown function -1 17387 17671
AUV62209.1 MG820636_p9 hypothetical protein phrog_501 head closure Hc1 connector 1 6095 6442
AUV62239.1 MG820636_p39 hypothetical protein phrog_1884 unknown function unknown function -1 24749 24976
AUV62235.1 MG820636_p35 hypothetical protein phrog_1890 unknown function unknown function -1 22748 23158
AUV62207.1 MG820636_p7 major capsid protein phrog_10 major head protein head and packaging 1 4641 5588
AUX13521.1 MG820636_p11 hypothetical protein phrog_1892 minor tail protein tail 1 6736 7107
AUV62243.1 MG820636_p43 hypothetical protein singleton unknown function unknown function -1 28252 28386
AUV62234.1 MG820636_p34 hypothetical protein phrog_1288 unknown function unknown function -1 22232 22693
AUX13523.1 MG820636_p19 hypothetical protein phrog_1958 minor tail protein tail 1 14263 14526
AUV62202.1 MG820636_p1 hypothetical protein phrog_1897 terminase small subunit head and packaging 1 47 373
AUV62231.1 MG820636_p31 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20106 20777
AUV62236.1 MG820636_p36 exonuclease phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23155 24096
AUV62204.1 MG820636_p3 portal (connector) protein phrog_104 portal protein head and packaging 1 1881 3026
AUV62206.1 MG820636_p6 capsid and scaffold protein phrog_1879 head scaffolding protein head and packaging 1 4074 4634
AUV62240.1 MG820636_p40 hypothetical protein phrog_1908 unknown function unknown function -1 24998 25531
AUV62242.1 MG820636_p42 hypothetical protein phrog_919 unknown function unknown function -1 26004 26312
AUV62214.1 MG820636_p14 hypothetical protein phrog_3166 unknown function unknown function 1 8195 8482
AUV62244.1 MG820636_p44 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 28528 28830
AUV62230.1 MG820636_p30 hypothetical protein phrog_1881 unknown function unknown function -1 19502 20059